RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 ABCA13Q86UQ4 5058 aa13.16□□□□□ -0.3
SMC4-222ENST00000490207 A0A087WX48 190 aa13.15□□□□□ -0.3
SMC4-222ENST00000490207 Q8N814 137 aa13.15□□□□□ -0.3
SMC4-222ENST00000490207 NTN5Q8WTR8 489 aaPredicted RBP13.15□□□□□ -0.3
SMC4-222ENST00000490207 IGLV5-52A0A0A0MRZ9 124 aa13.14□□□□□ -0.31
SMC4-222ENST00000490207 TRBV6-8A0A0A6YYG3 113 aa13.14□□□□□ -0.31
SMC4-222ENST00000490207 F2Z2F3 143 aa13.14□□□□□ -0.31
SMC4-222ENST00000490207 NKX2-5P52952 324 aaPredicted RBP13.14□□□□□ -0.31
SMC4-222ENST00000490207 KRTAP10-1P60331 282 aa13.14□□□□□ -0.31
SMC4-222ENST00000490207 Q8N1X5 172 aa13.14□□□□□ -0.31
SMC4-222ENST00000490207 NUDT10Q8NFP7 164 aa13.14□□□□□ -0.31
SMC4-222ENST00000490207 NUDT11Q96G61 164 aa13.14□□□□□ -0.31
SMC4-222ENST00000490207 KLK12Q9UKR0 248 aa13.14□□□□□ -0.31
SMC4-222ENST00000490207 K7EN84 100 aa13.13□□□□□ -0.31
SMC4-222ENST00000490207 GCSHP23434 173 aa13.13□□□□□ -0.31
SMC4-222ENST00000490207 LYZL1Q6UWQ5 148 aa13.13□□□□□ -0.31
SMC4-222ENST00000490207 LYPD6BQ8NI32 183 aa13.13□□□□□ -0.31
SMC4-222ENST00000490207 RMI2Q96E14 147 aa13.13□□□□□ -0.31
SMC4-222ENST00000490207 A0A1B0GVG6 124 aa13.12□□□□□ -0.31
SMC4-222ENST00000490207 TMEM250H0YL14 139 aa13.12□□□□□ -0.31
SMC4-222ENST00000490207 TRGC1P0CF51 173 aa13.12□□□□□ -0.31
SMC4-222ENST00000490207 CTRLP40313 264 aa13.12□□□□□ -0.31
SMC4-222ENST00000490207 ELOBQ15370 118 aa13.12□□□□□ -0.31
SMC4-222ENST00000490207 RNASE7Q9H1E1 156 aaKnown RBP13.12□□□□□ -0.31
SMC4-222ENST00000490207 RPP21Q9H633 154 aaKnown RBP13.12□□□□□ -0.31
SMC4-222ENST00000490207 H7C1H1 209 aa13.11□□□□□ -0.31
SMC4-222ENST00000490207 WFDC2Q14508 124 aa13.11□□□□□ -0.31
SMC4-222ENST00000490207 TMEM97Q5BJF2 176 aa13.11□□□□□ -0.31
SMC4-222ENST00000490207 SUMO4Q6EEV6 95 aa13.11□□□□□ -0.31
SMC4-222ENST00000490207 OCC1Q8TAD7 63 aa13.11□□□□□ -0.31
SMC4-222ENST00000490207 UBE2WQ96B02 151 aa13.11□□□□□ -0.31
SMC4-222ENST00000490207 DNAJC30Q96LL9 226 aa13.11□□□□□ -0.31
SMC4-222ENST00000490207 COX11Q9Y6N1 276 aa13.11□□□□□ -0.31
SMC4-222ENST00000490207 IGKV2D-24A0A075B6R9 120 aa13.1□□□□□ -0.31
SMC4-222ENST00000490207 TMEM262E9PQX1 116 aa13.1□□□□□ -0.31
SMC4-222ENST00000490207 CHCHD5Q9BSY4 110 aa13.1□□□□□ -0.31
SMC4-222ENST00000490207 M0QY20 66 aa13.09□□□□□ -0.31
SMC4-222ENST00000490207 PKIAP61925 76 aa13.09□□□□□ -0.31
SMC4-222ENST00000490207 DPH3P1Q9H4G8 78 aa13.09□□□□□ -0.31
SMC4-222ENST00000490207 LECT2O14960 151 aa13.08□□□□□ -0.32
SMC4-222ENST00000490207 NTF3P20783 257 aa13.08□□□□□ -0.32
SMC4-222ENST00000490207 CEBPGP53567 150 aa13.08□□□□□ -0.32
SMC4-222ENST00000490207 XGP55808 180 aa13.08□□□□□ -0.32
SMC4-222ENST00000490207 MPV17L2Q567V2 206 aa13.08□□□□□ -0.32
SMC4-222ENST00000490207 WDR73Q6P4I2 378 aa13.08□□□□□ -0.32
SMC4-222ENST00000490207 CNFNQ9BYD5 112 aa13.08□□□□□ -0.32
SMC4-222ENST00000490207 DNAH8Q96JB1 4490 aa13.07□□□□□ -0.32
SMC4-222ENST00000490207 CRPP02741 224 aa13.07□□□□□ -0.32
SMC4-222ENST00000490207 Q0VG73 95 aa13.07□□□□□ -0.32
SMC4-222ENST00000490207 LCE2DQ5TA82 110 aaPredicted RBP13.07□□□□□ -0.32
SMC4-222ENST00000490207 NTM-AS1Q6ZSK4 140 aa13.07□□□□□ -0.32
SMC4-222ENST00000490207 C15orf54Q8N8G6 183 aa13.07□□□□□ -0.32
SMC4-222ENST00000490207 BAALCQ8WXS3 180 aa13.07□□□□□ -0.32
SMC4-222ENST00000490207 TRBV25-1A0A075B6N4 114 aa13.06□□□□□ -0.32
SMC4-222ENST00000490207 TWIST1Q15672 202 aa13.06□□□□□ -0.32
SMC4-222ENST00000490207 RASL11AQ6T310 242 aa13.06□□□□□ -0.32
SMC4-222ENST00000490207 EIF5A2Q9GZV4 153 aaKnown RBP13.06□□□□□ -0.32
SMC4-222ENST00000490207 GATCO43716 136 aaKnown RBP13.05□□□□□ -0.32
SMC4-222ENST00000490207 ANGP03950 147 aaKnown RBP13.05□□□□□ -0.32
SMC4-222ENST00000490207 ATRAIDQ6UW56 229 aa13.05□□□□□ -0.32
SMC4-222ENST00000490207 FAM210AQ96ND0 272 aa13.05□□□□□ -0.32
SMC4-222ENST00000490207 NDUFS6O75380 124 aaKnown RBP13.04□□□□□ -0.32
SMC4-222ENST00000490207 GAGE6Q13070 117 aa13.04□□□□□ -0.32
SMC4-222ENST00000490207 FAM231DQ6ZW35 169 aa13.04□□□□□ -0.32
SMC4-222ENST00000490207 GTSF1Q8WW33 167 aa13.04□□□□□ -0.32
SMC4-222ENST00000490207 SMIM7Q9BQ49 75 aa13.04□□□□□ -0.32
SMC4-222ENST00000490207 TMEM70Q9BUB7 260 aa13.04□□□□□ -0.32
SMC4-222ENST00000490207 C1orf43Q9BWL3 253 aa13.04□□□□□ -0.32
SMC4-222ENST00000490207 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.03□□□□□ -0.32
SMC4-222ENST00000490207 IGHV1-24A0A0C4DH33 117 aa13.03□□□□□ -0.32
SMC4-222ENST00000490207 IQCJQ1A5X6 159 aa13.03□□□□□ -0.32
SMC4-222ENST00000490207 ENHOQ6UWT2 76 aa13.03□□□□□ -0.32
SMC4-222ENST00000490207 Q8N976 141 aa13.03□□□□□ -0.32
SMC4-222ENST00000490207 NIT2Q9NQR4 276 aa13.02□□□□□ -0.33
SMC4-222ENST00000490207 A8MWL6 223 aa13.01□□□□□ -0.33
SMC4-222ENST00000490207 EPM2AB3EWF7 344 aa13.01□□□□□ -0.33
SMC4-222ENST00000490207 FAT1Q14517 4588 aa13.01□□□□□ -0.33
SMC4-222ENST00000490207 SRP19P09132 144 aaKnown RBP13□□□□□ -0.33
SMC4-222ENST00000490207 RBX1P62877 108 aa13□□□□□ -0.33
SMC4-222ENST00000490207 HAMPP81172 84 aa13□□□□□ -0.33
SMC4-222ENST00000490207 CT83Q5H943 113 aa13□□□□□ -0.33
SMC4-222ENST00000490207 SMIM15Q7Z3B0 74 aa13□□□□□ -0.33
SMC4-222ENST00000490207 PGLYRP4Q96LB8 373 aa13□□□□□ -0.33
SMC4-222ENST00000490207 ZNF727A8MUV8 499 aa12.99□□□□□ -0.33
SMC4-222ENST00000490207 MIAQ16674 131 aa12.99□□□□□ -0.33
SMC4-222ENST00000490207 CLPSL2Q6UWE3 100 aa12.99□□□□□ -0.33
SMC4-222ENST00000490207 LINC01551Q86U37 167 aa12.99□□□□□ -0.33
SMC4-222ENST00000490207 TRAV26-2A0A0B4J265 109 aa12.98□□□□□ -0.33
SMC4-222ENST00000490207 GATD1Q8NB37 220 aa12.98□□□□□ -0.33
SMC4-222ENST00000490207 FRZBQ92765 325 aa12.98□□□□□ -0.33
SMC4-222ENST00000490207 TMEM243Q9BU79 118 aa12.98□□□□□ -0.33
SMC4-222ENST00000490207 VPS13BQ7Z7G8 4022 aa12.98□□□□□ -0.33
SMC4-222ENST00000490207 HLA-DQA1P01909 254 aa12.97□□□□□ -0.33
SMC4-222ENST00000490207 Q5VSD8 79 aa12.97□□□□□ -0.33
SMC4-222ENST00000490207 LINC00269Q8N2A0 174 aa12.97□□□□□ -0.33
SMC4-222ENST00000490207 BORCS7Q96B45 105 aa12.97□□□□□ -0.33
SMC4-222ENST00000490207 PRR34Q9NV39 138 aa12.97□□□□□ -0.33
SMC4-222ENST00000490207 COTL1Q14019 142 aa12.96□□□□□ -0.33
SMC4-222ENST00000490207 DEFB104AQ8WTQ1 72 aa12.96□□□□□ -0.33
SMC4-222ENST00000490207 FAM30AQ9NZY2 134 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms