RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 TMEM262E9PQX1 116 aa12.65□□□□□ -0.38
TNFRSF1B-202ENST00000489921 SSTP61278 116 aa12.65□□□□□ -0.38
TNFRSF1B-202ENST00000489921 Q0VG73 95 aa12.65□□□□□ -0.38
TNFRSF1B-202ENST00000489921 SPANXN1Q5VSR9 72 aa12.65□□□□□ -0.38
TNFRSF1B-202ENST00000489921 VAX2Q9UIW0 290 aa12.65□□□□□ -0.38
TNFRSF1B-202ENST00000489921 KRTAP10-4P60372 401 aaPredicted RBP12.64□□□□□ -0.39
TNFRSF1B-202ENST00000489921 TRAV1-1A0A0B4J248 108 aa12.63□□□□□ -0.39
TNFRSF1B-202ENST00000489921 GZMBP10144 247 aa12.63□□□□□ -0.39
TNFRSF1B-202ENST00000489921 KCNIP4Q6PIL6 250 aa12.63□□□□□ -0.39
TNFRSF1B-202ENST00000489921 C15orf54Q8N8G6 183 aa12.63□□□□□ -0.39
TNFRSF1B-202ENST00000489921 FAT3Q8TDW7 4589 aa12.62□□□□□ -0.39
TNFRSF1B-202ENST00000489921 PLA2G1BP04054 148 aaKnown RBP12.62□□□□□ -0.39
TNFRSF1B-202ENST00000489921 IGLC6P0CF74 106 aa12.62□□□□□ -0.39
TNFRSF1B-202ENST00000489921 CHAC1Q9BUX1 264 aa12.62□□□□□ -0.39
TNFRSF1B-202ENST00000489921 MANBALQ9NQG1 85 aa12.62□□□□□ -0.39
TNFRSF1B-202ENST00000489921 GNG13Q9P2W3 67 aa12.62□□□□□ -0.39
TNFRSF1B-202ENST00000489921 C19orf71A6NCJ1 209 aa12.61□□□□□ -0.39
TNFRSF1B-202ENST00000489921 F5H697 171 aa12.61□□□□□ -0.39
TNFRSF1B-202ENST00000489921 EIF5AP63241 154 aaKnown RBP12.61□□□□□ -0.39
TNFRSF1B-202ENST00000489921 KRTAP26-1Q6PEX3 210 aa12.61□□□□□ -0.39
TNFRSF1B-202ENST00000489921 CIRBP-AS1Q8TBR5 109 aa12.61□□□□□ -0.39
TNFRSF1B-202ENST00000489921 C1orf43Q9BWL3 253 aa12.61□□□□□ -0.39
TNFRSF1B-202ENST00000489921 ANGP03950 147 aaKnown RBP12.6□□□□□ -0.39
TNFRSF1B-202ENST00000489921 CENPWQ5EE01 88 aa12.6□□□□□ -0.39
TNFRSF1B-202ENST00000489921 CHCHD5Q9BSY4 110 aa12.6□□□□□ -0.39
TNFRSF1B-202ENST00000489921 PRR34Q9NV39 138 aa12.6□□□□□ -0.39
TNFRSF1B-202ENST00000489921 RAB19A4D1S5 217 aa12.59□□□□□ -0.39
TNFRSF1B-202ENST00000489921 M0QY20 66 aa12.59□□□□□ -0.39
TNFRSF1B-202ENST00000489921 AP1S3Q96PC3 154 aa12.59□□□□□ -0.39
TNFRSF1B-202ENST00000489921 TRBV20OR9-2A0A075B6H5 130 aa12.58□□□□□ -0.4
TNFRSF1B-202ENST00000489921 RBX1P62877 108 aa12.58□□□□□ -0.4
TNFRSF1B-202ENST00000489921 PKHD1L1Q86WI1 4243 aa12.58□□□□□ -0.4
TNFRSF1B-202ENST00000489921 KRTAP29-1A8MX34 341 aaPredicted RBP12.57□□□□□ -0.4
TNFRSF1B-202ENST00000489921 USP17L23D6RBM5 183 aa12.57□□□□□ -0.4
TNFRSF1B-202ENST00000489921 CRPP02741 224 aa12.57□□□□□ -0.4
TNFRSF1B-202ENST00000489921 SMIM17P0DL12 118 aa12.57□□□□□ -0.4
TNFRSF1B-202ENST00000489921 RAB5CP51148 216 aa12.57□□□□□ -0.4
TNFRSF1B-202ENST00000489921 TMEM97Q5BJF2 176 aa12.57□□□□□ -0.4
TNFRSF1B-202ENST00000489921 FER1L6-AS1Q8NA97 138 aa12.57□□□□□ -0.4
TNFRSF1B-202ENST00000489921 PRSS1P07477 247 aa12.56□□□□□ -0.4
TNFRSF1B-202ENST00000489921 SULT1A2P50226 295 aa12.56□□□□□ -0.4
TNFRSF1B-202ENST00000489921 GAGE6Q13070 117 aa12.56□□□□□ -0.4
TNFRSF1B-202ENST00000489921 MIAQ16674 131 aa12.56□□□□□ -0.4
TNFRSF1B-202ENST00000489921 IQCJQ1A5X6 159 aa12.56□□□□□ -0.4
TNFRSF1B-202ENST00000489921 C14orf177Q52M58 125 aa12.56□□□□□ -0.4
TNFRSF1B-202ENST00000489921 SUMO4Q6EEV6 95 aa12.56□□□□□ -0.4
TNFRSF1B-202ENST00000489921 LINC00269Q8N2A0 174 aa12.56□□□□□ -0.4
TNFRSF1B-202ENST00000489921 OR2D3Q8NGH3 330 aa12.56□□□□□ -0.4
TNFRSF1B-202ENST00000489921 PKIAP61925 76 aa12.55□□□□□ -0.4
TNFRSF1B-202ENST00000489921 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.55□□□□□ -0.4
TNFRSF1B-202ENST00000489921 DEFB104AQ8WTQ1 72 aa12.55□□□□□ -0.4
TNFRSF1B-202ENST00000489921 SMIM12Q96EX1 92 aa12.55□□□□□ -0.4
TNFRSF1B-202ENST00000489921 TPPP3Q9BW30 176 aa12.55□□□□□ -0.4
TNFRSF1B-202ENST00000489921 TRBV25-1A0A075B6N4 114 aa12.54□□□□□ -0.4
TNFRSF1B-202ENST00000489921 J3QL48 77 aa12.54□□□□□ -0.4
TNFRSF1B-202ENST00000489921 HLA-DQA1P01909 254 aa12.54□□□□□ -0.4
TNFRSF1B-202ENST00000489921 RPS20P60866 119 aaKnown RBP12.54□□□□□ -0.4
TNFRSF1B-202ENST00000489921 MEF2BQ02080 365 aaPredicted RBP12.54□□□□□ -0.4
TNFRSF1B-202ENST00000489921 CLPSL2Q6UWE3 100 aa12.54□□□□□ -0.4
TNFRSF1B-202ENST00000489921 MGPP08493 103 aa12.53□□□□□ -0.4
TNFRSF1B-202ENST00000489921 GNG4P50150 75 aa12.53□□□□□ -0.4
TNFRSF1B-202ENST00000489921 CACNG7P62955 275 aa12.53□□□□□ -0.4
TNFRSF1B-202ENST00000489921 LYZL1Q6UWQ5 148 aa12.53□□□□□ -0.4
TNFRSF1B-202ENST00000489921 DAZAP1Q96EP5 407 aaKnown RBP12.53□□□□□ -0.4
TNFRSF1B-202ENST00000489921 IGHV1-24A0A0C4DH33 117 aa12.52□□□□□ -0.41
TNFRSF1B-202ENST00000489921 PDE6DO43924 150 aa12.52□□□□□ -0.41
TNFRSF1B-202ENST00000489921 C20orf203Q8NBC4 194 aa12.52□□□□□ -0.41
TNFRSF1B-202ENST00000489921 F2Z2F3 143 aa12.51□□□□□ -0.41
TNFRSF1B-202ENST00000489921 NTF3P20783 257 aa12.51□□□□□ -0.41
TNFRSF1B-202ENST00000489921 NKX2-5P52952 324 aaPredicted RBP12.51□□□□□ -0.41
TNFRSF1B-202ENST00000489921 DGAT2L7PQ6IED9 249 aa12.51□□□□□ -0.41
TNFRSF1B-202ENST00000489921 EIF5AL1Q6IS14 154 aaKnown RBP12.51□□□□□ -0.41
TNFRSF1B-202ENST00000489921 MED9Q9NWA0 146 aa12.51□□□□□ -0.41
TNFRSF1B-202ENST00000489921 H7C1H1 209 aa12.5□□□□□ -0.41
TNFRSF1B-202ENST00000489921 P01737 135 aa12.5□□□□□ -0.41
TNFRSF1B-202ENST00000489921 BCL2P10415 239 aa12.5□□□□□ -0.41
TNFRSF1B-202ENST00000489921 RASL11AQ6T310 242 aa12.5□□□□□ -0.41
TNFRSF1B-202ENST00000489921 TCTE3Q8IZS6 198 aa12.5□□□□□ -0.41
TNFRSF1B-202ENST00000489921 C9orf62Q8N4C0 152 aa12.5□□□□□ -0.41
TNFRSF1B-202ENST00000489921 C9orf163Q8N9P6 203 aa12.5□□□□□ -0.41
TNFRSF1B-202ENST00000489921 NUDT10Q8NFP7 164 aa12.5□□□□□ -0.41
TNFRSF1B-202ENST00000489921 NUDT11Q96G61 164 aa12.5□□□□□ -0.41
TNFRSF1B-202ENST00000489921 GFRA4Q9GZZ7 299 aa12.5□□□□□ -0.41
TNFRSF1B-202ENST00000489921 IGLV4-60A0A075B6I1 120 aa12.49□□□□□ -0.41
TNFRSF1B-202ENST00000489921 TEX46H3BTG2 121 aa12.49□□□□□ -0.41
TNFRSF1B-202ENST00000489921 PANO1I0J062 215 aa12.49□□□□□ -0.41
TNFRSF1B-202ENST00000489921 REG3AQ06141 175 aa12.49□□□□□ -0.41
TNFRSF1B-202ENST00000489921 HMCN2Q8NDA2 5059 aa12.49□□□□□ -0.41
TNFRSF1B-202ENST00000489921 A0A1B0GUV1 79 aa12.48□□□□□ -0.41
TNFRSF1B-202ENST00000489921 IFNA1P01562 189 aa12.48□□□□□ -0.41
TNFRSF1B-202ENST00000489921 CTRLP40313 264 aa12.48□□□□□ -0.41
TNFRSF1B-202ENST00000489921 WDR73Q6P4I2 378 aa12.48□□□□□ -0.41
TNFRSF1B-202ENST00000489921 CNFNQ9BYD5 112 aa12.48□□□□□ -0.41
TNFRSF1B-202ENST00000489921 DPH3P1Q9H4G8 78 aa12.48□□□□□ -0.41
TNFRSF1B-202ENST00000489921 NIT2Q9NQR4 276 aa12.48□□□□□ -0.41
TNFRSF1B-202ENST00000489921 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.48□□□□□ -0.41
TNFRSF1B-202ENST00000489921 IGLV10-54A0A075B6I4 117 aa12.47□□□□□ -0.41
TNFRSF1B-202ENST00000489921 XKRY2A2RUG3 117 aa12.47□□□□□ -0.41
TNFRSF1B-202ENST00000489921 K7EN84 100 aa12.47□□□□□ -0.41
TNFRSF1B-202ENST00000489921 SDIM1Q6ZPB5 146 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms