RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 LINC01556Q5JQF7 62 aa7.57□□□□□ -1.2
CPSF7-212ENST00000489728 C1orf134Q5TEV5 83 aa7.57□□□□□ -1.2
CPSF7-212ENST00000489728 DAZ4Q86SG3 579 aaKnown RBP7.57□□□□□ -1.2
CPSF7-212ENST00000489728 C10orf126Q8N4M7 172 aa7.57□□□□□ -1.2
CPSF7-212ENST00000489728 NEXN-AS1Q8NBZ9 246 aa7.57□□□□□ -1.2
CPSF7-212ENST00000489728 PGLYRP4Q96LB8 373 aa7.57□□□□□ -1.2
CPSF7-212ENST00000489728 DAZ3Q9NR90 486 aaKnown RBP7.57□□□□□ -1.2
CPSF7-212ENST00000489728 IGHV3-38A0A0C4DH36 116 aa7.56□□□□□ -1.2
CPSF7-212ENST00000489728 A0A1B0GW15 77 aa7.56□□□□□ -1.2
CPSF7-212ENST00000489728 SUMO4Q6EEV6 95 aa7.56□□□□□ -1.2
CPSF7-212ENST00000489728 RASL11AQ6T310 242 aa7.56□□□□□ -1.2
CPSF7-212ENST00000489728 WFDC10BQ8IUB3 73 aa7.56□□□□□ -1.2
CPSF7-212ENST00000489728 C6orf223Q8N319 242 aa7.56□□□□□ -1.2
CPSF7-212ENST00000489728 Q9UF83 564 aa7.56□□□□□ -1.2
CPSF7-212ENST00000489728 LINC00862A6NCI5 91 aa7.55□□□□□ -1.2
CPSF7-212ENST00000489728 RIGQ13278 110 aa7.55□□□□□ -1.2
CPSF7-212ENST00000489728 OR10J3Q5JRS4 329 aa7.55□□□□□ -1.2
CPSF7-212ENST00000489728 NUP35Q8NFH5 326 aa7.55□□□□□ -1.2
CPSF7-212ENST00000489728 TMEM191AQ9H0A3 160 aa7.55□□□□□ -1.2
CPSF7-212ENST00000489728 TMEM218A2RU14 115 aa7.54□□□□□ -1.2
CPSF7-212ENST00000489728 RTL8CO15255 209 aa7.54□□□□□ -1.2
CPSF7-212ENST00000489728 MT-ND4LP03901 98 aa7.54□□□□□ -1.2
CPSF7-212ENST00000489728 S100A8P05109 93 aa7.54□□□□□ -1.2
CPSF7-212ENST00000489728 PKIAP61925 76 aa7.54□□□□□ -1.2
CPSF7-212ENST00000489728 NFE4Q86UQ8 179 aa7.54□□□□□ -1.2
CPSF7-212ENST00000489728 ANAPC16Q96DE5 110 aa7.54□□□□□ -1.2
CPSF7-212ENST00000489728 CHCHD7Q9BUK0 85 aa7.54□□□□□ -1.2
CPSF7-212ENST00000489728 SEC11CQ9BY50 192 aa7.54□□□□□ -1.2
CPSF7-212ENST00000489728 KRTAP1-5Q9BYS1 174 aa7.54□□□□□ -1.2
CPSF7-212ENST00000489728 NIT2Q9NQR4 276 aa7.54□□□□□ -1.2
CPSF7-212ENST00000489728 TNFRSF18Q9Y5U5 241 aa7.54□□□□□ -1.2
CPSF7-212ENST00000489728 TRBV6-8A0A0A6YYG3 113 aa7.53□□□□□ -1.2
CPSF7-212ENST00000489728 COMMD7Q86VX2 200 aa7.53□□□□□ -1.2
CPSF7-212ENST00000489728 LAGE3Q14657 143 aa7.52□□□□□ -1.21
CPSF7-212ENST00000489728 KCNIP4Q6PIL6 250 aa7.52□□□□□ -1.21
CPSF7-212ENST00000489728 ATP5L2Q7Z4Y8 100 aa7.52□□□□□ -1.21
CPSF7-212ENST00000489728 GATD1Q8NB37 220 aa7.52□□□□□ -1.21
CPSF7-212ENST00000489728 MRAP2Q96G30 205 aa7.52□□□□□ -1.21
CPSF7-212ENST00000489728 TRBV6-5A0A0K0K1A5 114 aa7.51□□□□□ -1.21
CPSF7-212ENST00000489728 F8W036 122 aa7.51□□□□□ -1.21
CPSF7-212ENST00000489728 PPP1R17O96001 155 aa7.51□□□□□ -1.21
CPSF7-212ENST00000489728 ADCYAP1P18509 176 aa7.51□□□□□ -1.21
CPSF7-212ENST00000489728 HBBP68871 147 aa7.51□□□□□ -1.21
CPSF7-212ENST00000489728 URGCP-MRPS24S4R325 110 aa7.51□□□□□ -1.21
CPSF7-212ENST00000489728 PRSS29PA6NIE9 313 aa7.5□□□□□ -1.21
CPSF7-212ENST00000489728 IBA57-AS1B1ANH7 110 aa7.5□□□□□ -1.21
CPSF7-212ENST00000489728 ELOBQ15370 118 aa7.5□□□□□ -1.21
CPSF7-212ENST00000489728 IQCJQ1A5X6 159 aa7.5□□□□□ -1.21
CPSF7-212ENST00000489728 C10orf91Q5T1B1 145 aa7.5□□□□□ -1.21
CPSF7-212ENST00000489728 NIT1Q86X76 327 aa7.5□□□□□ -1.21
CPSF7-212ENST00000489728 IMMP2LQ96T52 175 aa7.5□□□□□ -1.21
CPSF7-212ENST00000489728 DNAH10Q8IVF4 4471 aa7.5□□□□□ -1.21
CPSF7-212ENST00000489728 FRAS1Q86XX4 4008 aa7.49□□□□□ -1.21
CPSF7-212ENST00000489728 TRBV25-1A0A075B6N4 114 aa7.49□□□□□ -1.21
CPSF7-212ENST00000489728 TRAV26-2A0A0B4J265 109 aa7.49□□□□□ -1.21
CPSF7-212ENST00000489728 IGHV1-24A0A0C4DH33 117 aa7.49□□□□□ -1.21
CPSF7-212ENST00000489728 A0A1B0GXF2 115 aa7.49□□□□□ -1.21
CPSF7-212ENST00000489728 NCR2O95944 276 aa7.49□□□□□ -1.21
CPSF7-212ENST00000489728 RAB4AP20338 218 aa7.49□□□□□ -1.21
CPSF7-212ENST00000489728 RNF185Q96GF1 192 aa7.49□□□□□ -1.21
CPSF7-212ENST00000489728 CTDSP1Q9GZU7 261 aa7.49□□□□□ -1.21
CPSF7-212ENST00000489728 CARHSP1Q9Y2V2 147 aaKnown RBP7.49□□□□□ -1.21
CPSF7-212ENST00000489728 DNAH2Q9P225 4427 aa7.48□□□□□ -1.21
CPSF7-212ENST00000489728 A0A087WX48 190 aa7.48□□□□□ -1.21
CPSF7-212ENST00000489728 COTL1Q14019 142 aa7.48□□□□□ -1.21
CPSF7-212ENST00000489728 FAM104BQ5XKR9 115 aa7.48□□□□□ -1.21
CPSF7-212ENST00000489728 Q6ZRN7 208 aaPredicted RBP7.48□□□□□ -1.21
CPSF7-212ENST00000489728 AMN1Q8IY45 258 aa7.48□□□□□ -1.21
CPSF7-212ENST00000489728 TRAV9-1A0A075B6T8 112 aa7.47□□□□□ -1.21
CPSF7-212ENST00000489728 TRAV8-3A0A0A6YYJ7 113 aa7.47□□□□□ -1.21
CPSF7-212ENST00000489728 A0A1B0GVY2 172 aa7.47□□□□□ -1.21
CPSF7-212ENST00000489728 IGHV3-30P01768 117 aa7.47□□□□□ -1.21
CPSF7-212ENST00000489728 IGHV3-33P01772 117 aa7.47□□□□□ -1.21
CPSF7-212ENST00000489728 IGHV3-30-3P0DP02 117 aa7.47□□□□□ -1.21
CPSF7-212ENST00000489728 IGHV3-30-5P0DP03 117 aa7.47□□□□□ -1.21
CPSF7-212ENST00000489728 CAMPP49913 170 aa7.47□□□□□ -1.21
CPSF7-212ENST00000489728 NTM-AS1Q6ZSK4 140 aa7.47□□□□□ -1.21
CPSF7-212ENST00000489728 BTF3L4Q96K17 158 aa7.47□□□□□ -1.21
CPSF7-212ENST00000489728 CHCHD5Q9BSY4 110 aa7.47□□□□□ -1.21
CPSF7-212ENST00000489728 TMEM242Q9NWH2 141 aa7.47□□□□□ -1.21
CPSF7-212ENST00000489728 SDHAF1A6NFY7 115 aa7.46□□□□□ -1.22
CPSF7-212ENST00000489728 PPBPP02775 128 aa7.46□□□□□ -1.22
CPSF7-212ENST00000489728 RHEBQ15382 184 aa7.46□□□□□ -1.22
CPSF7-212ENST00000489728 MRPL54Q6P161 138 aaKnown RBP7.46□□□□□ -1.22
CPSF7-212ENST00000489728 RPL39LQ96EH5 51 aaKnown RBP7.46□□□□□ -1.22
CPSF7-212ENST00000489728 TMEM243Q9BU79 118 aa7.46□□□□□ -1.22
CPSF7-212ENST00000489728 ST20Q9HBF5 79 aa7.46□□□□□ -1.22
CPSF7-212ENST00000489728 COX11Q9Y6N1 276 aa7.46□□□□□ -1.22
CPSF7-212ENST00000489728 FAT2Q9NYQ8 4349 aa7.46□□□□□ -1.22
CPSF7-212ENST00000489728 TRBV27A0A0K0K1C4 114 aa7.45□□□□□ -1.22
CPSF7-212ENST00000489728 H7C423 109 aa7.45□□□□□ -1.22
CPSF7-212ENST00000489728 I3L3M4 83 aa7.45□□□□□ -1.22
CPSF7-212ENST00000489728 AMTP48728 403 aa7.45□□□□□ -1.22
CPSF7-212ENST00000489728 TNP2Q05952 138 aa7.45□□□□□ -1.22
CPSF7-212ENST00000489728 Q0VG73 95 aa7.45□□□□□ -1.22
CPSF7-212ENST00000489728 RMI2Q96E14 147 aa7.45□□□□□ -1.22
CPSF7-212ENST00000489728 TMEM70Q9BUB7 260 aa7.45□□□□□ -1.22
CPSF7-212ENST00000489728 TM2D2Q9BX73 214 aa7.45□□□□□ -1.22
CPSF7-212ENST00000489728 HECTD4Q9Y4D8 3996 aa7.45□□□□□ -1.22
CPSF7-212ENST00000489728 EPPK1P58107 5090 aaKnown RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms