RNA–Protein interactions for RNA: ENST00000489469.5

SMIM11A-206, Transcript of small integral membrane protein 11A, humanhuman

TSL 2

Gene SMIM11A, Length 780 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-206ENST00000489469 GAGE5Q13069 117 aa10.69□□□□□ -0.7
SMIM11A-206ENST00000489469 GAGE13Q4V321 117 aa10.69□□□□□ -0.7
SMIM11A-206ENST00000489469 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.69□□□□□ -0.7
SMIM11A-206ENST00000489469 FRZBQ92765 325 aa10.69□□□□□ -0.7
SMIM11A-206ENST00000489469 CTDSP1Q9GZU7 261 aa10.69□□□□□ -0.7
SMIM11A-206ENST00000489469 TMEM191AQ9H0A3 160 aa10.69□□□□□ -0.7
SMIM11A-206ENST00000489469 NDUFA5Q16718 116 aa10.68□□□□□ -0.7
SMIM11A-206ENST00000489469 ZNRF2Q8NHG8 242 aa10.68□□□□□ -0.7
SMIM11A-206ENST00000489469 DNAJC30Q96LL9 226 aa10.68□□□□□ -0.7
SMIM11A-206ENST00000489469 GTSF1LQ9H1H1 148 aa10.68□□□□□ -0.7
SMIM11A-206ENST00000489469 M0QY20 66 aa10.67□□□□□ -0.7
SMIM11A-206ENST00000489469 SUMO4Q6EEV6 95 aa10.67□□□□□ -0.7
SMIM11A-206ENST00000489469 IMMP2LQ96T52 175 aa10.67□□□□□ -0.7
SMIM11A-206ENST00000489469 VPS13DQ5THJ4 4388 aa10.66□□□□□ -0.7
SMIM11A-206ENST00000489469 A0A087WWC5 75 aa10.66□□□□□ -0.7
SMIM11A-206ENST00000489469 UBE2D3P61077 147 aa10.66□□□□□ -0.7
SMIM11A-206ENST00000489469 UBE2D2P62837 147 aa10.66□□□□□ -0.7
SMIM11A-206ENST00000489469 RASL11AQ6T310 242 aa10.66□□□□□ -0.7
SMIM11A-206ENST00000489469 ATP5L2Q7Z4Y8 100 aa10.66□□□□□ -0.7
SMIM11A-206ENST00000489469 NEXN-AS1Q8NBZ9 246 aa10.66□□□□□ -0.7
SMIM11A-206ENST00000489469 HBBP68871 147 aa10.65□□□□□ -0.7
SMIM11A-206ENST00000489469 RHEBQ15382 184 aa10.65□□□□□ -0.7
SMIM11A-206ENST00000489469 LELP1Q5T871 98 aa10.65□□□□□ -0.7
SMIM11A-206ENST00000489469 Q9H8V8 135 aa10.65□□□□□ -0.7
SMIM11A-206ENST00000489469 TNFRSF18Q9Y5U5 241 aa10.65□□□□□ -0.7
SMIM11A-206ENST00000489469 SACSQ9NZJ4 4579 aa10.64□□□□□ -0.71
SMIM11A-206ENST00000489469 TRAV8-6A0A0B4J262 113 aa10.64□□□□□ -0.71
SMIM11A-206ENST00000489469 TMEM97Q5BJF2 176 aa10.64□□□□□ -0.71
SMIM11A-206ENST00000489469 KCNIP4Q6PIL6 250 aa10.64□□□□□ -0.71
SMIM11A-206ENST00000489469 DAZ4Q86SG3 579 aaKnown RBP10.64□□□□□ -0.71
SMIM11A-206ENST00000489469 NIT2Q9NQR4 276 aa10.64□□□□□ -0.71
SMIM11A-206ENST00000489469 DAZ3Q9NR90 486 aaKnown RBP10.64□□□□□ -0.71
SMIM11A-206ENST00000489469 TMEM242Q9NWH2 141 aa10.64□□□□□ -0.71
SMIM11A-206ENST00000489469 Q9UF83 564 aa10.64□□□□□ -0.71
SMIM11A-206ENST00000489469 A0A1B0GXF2 115 aa10.63□□□□□ -0.71
SMIM11A-206ENST00000489469 SIVA1O15304 175 aa10.63□□□□□ -0.71
SMIM11A-206ENST00000489469 EIF4EBP3O60516 100 aaPredicted RBP10.63□□□□□ -0.71
SMIM11A-206ENST00000489469 CAMPP49913 170 aa10.63□□□□□ -0.71
SMIM11A-206ENST00000489469 TTC32Q5I0X7 151 aa10.63□□□□□ -0.71
SMIM11A-206ENST00000489469 MRPL54Q6P161 138 aaKnown RBP10.63□□□□□ -0.71
SMIM11A-206ENST00000489469 SVBPQ8N300 66 aa10.63□□□□□ -0.71
SMIM11A-206ENST00000489469 CLRN3Q8NCR9 226 aa10.63□□□□□ -0.71
SMIM11A-206ENST00000489469 MRAP2Q96G30 205 aa10.63□□□□□ -0.71
SMIM11A-206ENST00000489469 BTF3L4Q96K17 158 aa10.63□□□□□ -0.71
SMIM11A-206ENST00000489469 DNAH6Q9C0G6 4158 aa10.62□□□□□ -0.71
SMIM11A-206ENST00000489469 TRAV9-1A0A075B6T8 112 aa10.62□□□□□ -0.71
SMIM11A-206ENST00000489469 C7orf77A4D0Y5 90 aa10.62□□□□□ -0.71
SMIM11A-206ENST00000489469 K7EP13 123 aa10.62□□□□□ -0.71
SMIM11A-206ENST00000489469 SNAPINO95295 136 aa10.62□□□□□ -0.71
SMIM11A-206ENST00000489469 APOC3P02656 99 aa10.62□□□□□ -0.71
SMIM11A-206ENST00000489469 RAB4AP20338 218 aa10.62□□□□□ -0.71
SMIM11A-206ENST00000489469 OR10J3Q5JRS4 329 aa10.62□□□□□ -0.71
SMIM11A-206ENST00000489469 GATD1Q8NB37 220 aa10.62□□□□□ -0.71
SMIM11A-206ENST00000489469 IGLV2-18A0A075B6J9 118 aa10.61□□□□□ -0.71
SMIM11A-206ENST00000489469 NBDYA0A0U1RRE5 68 aa10.61□□□□□ -0.71
SMIM11A-206ENST00000489469 PPP1R17O96001 155 aa10.61□□□□□ -0.71
SMIM11A-206ENST00000489469 S100PP25815 95 aa10.61□□□□□ -0.71
SMIM11A-206ENST00000489469 FAM104BQ5XKR9 115 aa10.61□□□□□ -0.71
SMIM11A-206ENST00000489469 AMN1Q8IY45 258 aa10.61□□□□□ -0.71
SMIM11A-206ENST00000489469 RNF185Q96GF1 192 aa10.61□□□□□ -0.71
SMIM11A-206ENST00000489469 KMT2AQ03164 3969 aa10.61□□□□□ -0.71
SMIM11A-206ENST00000489469 TRAV26-2A0A0B4J265 109 aa10.6□□□□□ -0.71
SMIM11A-206ENST00000489469 RPS10P5Q9NQ39 176 aa10.6□□□□□ -0.71
SMIM11A-206ENST00000489469 TRAV9-2A0A087WT02 112 aa10.59□□□□□ -0.71
SMIM11A-206ENST00000489469 IGHV3-38A0A0C4DH36 116 aa10.59□□□□□ -0.71
SMIM11A-206ENST00000489469 DNAH10OSP0CZ25 163 aa10.59□□□□□ -0.71
SMIM11A-206ENST00000489469 Q6ZR54 194 aa10.59□□□□□ -0.71
SMIM11A-206ENST00000489469 WFDC10BQ8IUB3 73 aa10.59□□□□□ -0.71
SMIM11A-206ENST00000489469 TRBV6-5A0A0K0K1A5 114 aa10.58□□□□□ -0.72
SMIM11A-206ENST00000489469 BTF3P20290 206 aaKnown RBP10.58□□□□□ -0.72
SMIM11A-206ENST00000489469 TRBV6-8A0A0A6YYG3 113 aa10.57□□□□□ -0.72
SMIM11A-206ENST00000489469 M0R2N4 97 aa10.57□□□□□ -0.72
SMIM11A-206ENST00000489469 PKIAP61925 76 aa10.57□□□□□ -0.72
SMIM11A-206ENST00000489469 MRPL51Q4U2R6 128 aaKnown RBP10.57□□□□□ -0.72
SMIM11A-206ENST00000489469 LINC01556Q5JQF7 62 aa10.57□□□□□ -0.72
SMIM11A-206ENST00000489469 C10orf126Q8N4M7 172 aa10.57□□□□□ -0.72
SMIM11A-206ENST00000489469 RPL39LQ96EH5 51 aaKnown RBP10.57□□□□□ -0.72
SMIM11A-206ENST00000489469 RYR2Q92736 4967 aa10.57□□□□□ -0.72
SMIM11A-206ENST00000489469 TMEM238LA0A1B0GVL6 79 aa10.56□□□□□ -0.72
SMIM11A-206ENST00000489469 PPBPP02775 128 aa10.56□□□□□ -0.72
SMIM11A-206ENST00000489469 SLC7A5P1Q8MH63 180 aa10.56□□□□□ -0.72
SMIM11A-206ENST00000489469 ST20Q9HBF5 79 aa10.56□□□□□ -0.72
SMIM11A-206ENST00000489469 TRBV25-1A0A075B6N4 114 aa10.55□□□□□ -0.72
SMIM11A-206ENST00000489469 SDHAF1A6NFY7 115 aa10.55□□□□□ -0.72
SMIM11A-206ENST00000489469 CKS2P33552 79 aa10.55□□□□□ -0.72
SMIM11A-206ENST00000489469 COTL1Q14019 142 aa10.55□□□□□ -0.72
SMIM11A-206ENST00000489469 COX19Q49B96 90 aa10.55□□□□□ -0.72
SMIM11A-206ENST00000489469 CHCHD7Q9BUK0 85 aa10.55□□□□□ -0.72
SMIM11A-206ENST00000489469 URGCP-MRPS24S4R325 110 aa10.55□□□□□ -0.72
SMIM11A-206ENST00000489469 HYDINQ4G0P3 5121 aa10.55□□□□□ -0.72
SMIM11A-206ENST00000489469 IGHV1-24A0A0C4DH33 117 aa10.54□□□□□ -0.72
SMIM11A-206ENST00000489469 NCR2O95944 276 aa10.54□□□□□ -0.72
SMIM11A-206ENST00000489469 IQCJQ1A5X6 159 aa10.54□□□□□ -0.72
SMIM11A-206ENST00000489469 I3L3M4 83 aa10.53□□□□□ -0.72
SMIM11A-206ENST00000489469 PHOX2AO14813 284 aa10.53□□□□□ -0.72
SMIM11A-206ENST00000489469 C1orf134Q5TEV5 83 aa10.53□□□□□ -0.72
SMIM11A-206ENST00000489469 NIT1Q86X76 327 aa10.53□□□□□ -0.72
SMIM11A-206ENST00000489469 ORMDL3Q8N138 153 aa10.53□□□□□ -0.72
SMIM11A-206ENST00000489469 TRBV24-1A0A075B6N3 115 aa10.52□□□□□ -0.73
SMIM11A-206ENST00000489469 A0A087WX48 190 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms