RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 PIGBOS1A0A0B4J2F0 54 aa0.81□□□□□ -2.28
XRN1-213ENST00000489241 SPAARA0A1B0GVQ0 90 aa0.81□□□□□ -2.28
XRN1-213ENST00000489241 SNAPC5O75971 98 aa0.81□□□□□ -2.28
XRN1-213ENST00000489241 EDDM3BP56851 147 aa0.81□□□□□ -2.28
XRN1-213ENST00000489241 SPINK7P58062 85 aa0.81□□□□□ -2.28
XRN1-213ENST00000489241 CCL8P80075 99 aa0.81□□□□□ -2.28
XRN1-213ENST00000489241 ZNF818PQ6ZRF7 136 aa0.81□□□□□ -2.28
XRN1-213ENST00000489241 Q8N8P6 123 aa0.81□□□□□ -2.28
XRN1-213ENST00000489241 RBBP6Q7Z6E9 1792 aaKnown RBP0.8□□□□□ -2.28
XRN1-213ENST00000489241 GVQW2A0A096LPI5 108 aaPredicted RBP0.8□□□□□ -2.28
XRN1-213ENST00000489241 F2Z2F3 143 aa0.8□□□□□ -2.28
XRN1-213ENST00000489241 RBM3P98179 157 aaKnown RBP0.8□□□□□ -2.28
XRN1-213ENST00000489241 Q56UQ5 140 aa0.8□□□□□ -2.28
XRN1-213ENST00000489241 SCN3BQ9NY72 215 aa0.8□□□□□ -2.28
XRN1-213ENST00000489241 DOCK11Q5JSL3 2073 aa0.8□□□□□ -2.28
XRN1-213ENST00000489241 CASKIN1Q8WXD9 1431 aa0.8□□□□□ -2.28
XRN1-213ENST00000489241 MIF4GDA9UHW6 222 aaKnown RBP0.79□□□□□ -2.28
XRN1-213ENST00000489241 APOC4-APOC2K7ER74 178 aa0.79□□□□□ -2.28
XRN1-213ENST00000489241 INSL4Q14641 139 aa0.79□□□□□ -2.28
XRN1-213ENST00000489241 C12orf73Q69YU5 71 aa0.79□□□□□ -2.28
XRN1-213ENST00000489241 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.79□□□□□ -2.28
XRN1-213ENST00000489241 PP6455Q8WZ26 134 aa0.79□□□□□ -2.28
XRN1-213ENST00000489241 BPESC1Q9GZL8 116 aa0.79□□□□□ -2.28
XRN1-213ENST00000489241 GNG8Q9UK08 70 aa0.79□□□□□ -2.28
XRN1-213ENST00000489241 LINC00312Q9Y6C7 94 aa0.79□□□□□ -2.28
XRN1-213ENST00000489241 JMJD1CQ15652 2540 aa0.79□□□□□ -2.28
XRN1-213ENST00000489241 NALCNQ8IZF0 1738 aa0.78□□□□□ -2.28
XRN1-213ENST00000489241 MAP2P11137 1827 aaKnown RBP0.78□□□□□ -2.28
XRN1-213ENST00000489241 TANC1Q9C0D5 1861 aa0.78□□□□□ -2.28
XRN1-213ENST00000489241 LINC00587B1AMM8 73 aa0.78□□□□□ -2.28
XRN1-213ENST00000489241 APOC2P02655 101 aa0.78□□□□□ -2.28
XRN1-213ENST00000489241 CATR1Q13166 79 aa0.78□□□□□ -2.28
XRN1-213ENST00000489241 C2orf88Q9BSF0 95 aa0.78□□□□□ -2.28
XRN1-213ENST00000489241 TRGV1A0A0A0MS02 117 aa0.77□□□□□ -2.29
XRN1-213ENST00000489241 HCG22E2RYF7 251 aa0.77□□□□□ -2.29
XRN1-213ENST00000489241 F6UZH7 168 aa0.77□□□□□ -2.29
XRN1-213ENST00000489241 SIX6O95475 246 aa0.77□□□□□ -2.29
XRN1-213ENST00000489241 S100A1P23297 94 aa0.77□□□□□ -2.29
XRN1-213ENST00000489241 SMIM11BQ8TCY0 68 aa0.77□□□□□ -2.29
XRN1-213ENST00000489241 TMEM203Q969S6 136 aa0.77□□□□□ -2.29
XRN1-213ENST00000489241 CDK13Q14004 1512 aaKnown RBP0.77□□□□□ -2.29
XRN1-213ENST00000489241 NWD2Q9ULI1 1742 aa0.77□□□□□ -2.29
XRN1-213ENST00000489241 F5P12259 2224 aa0.76□□□□□ -2.29
XRN1-213ENST00000489241 PATJQ8NI35 1801 aa0.76□□□□□ -2.29
XRN1-213ENST00000489241 TRAV13-2A0A0B4J235 113 aa0.76□□□□□ -2.29
XRN1-213ENST00000489241 IFNGP01579 166 aa0.76□□□□□ -2.29
XRN1-213ENST00000489241 ACYP2P14621 99 aa0.76□□□□□ -2.29
XRN1-213ENST00000489241 MRPL54Q6P161 138 aaKnown RBP0.76□□□□□ -2.29
XRN1-213ENST00000489241 DOCK2Q92608 1830 aa0.75□□□□□ -2.29
XRN1-213ENST00000489241 TPPP2P59282 170 aa0.75□□□□□ -2.29
XRN1-213ENST00000489241 PPP3R2Q96LZ3 170 aa0.75□□□□□ -2.29
XRN1-213ENST00000489241 AQP10Q96PS8 301 aa0.75□□□□□ -2.29
XRN1-213ENST00000489241 WFDC6Q9BQY6 131 aa0.75□□□□□ -2.29
XRN1-213ENST00000489241 PRR15LQ9BU68 103 aa0.75□□□□□ -2.29
XRN1-213ENST00000489241 PLAC8Q9NZF1 115 aa0.75□□□□□ -2.29
XRN1-213ENST00000489241 DOCK1Q14185 1865 aa0.75□□□□□ -2.29
XRN1-213ENST00000489241 ARAP2Q8WZ64 1704 aa0.75□□□□□ -2.29
XRN1-213ENST00000489241 KDM6BO15054 1643 aa0.75□□□□□ -2.29
XRN1-213ENST00000489241 SSC5DA1L4H1 1573 aa0.74□□□□□ -2.29
XRN1-213ENST00000489241 A2ML1A8K2U0 1454 aa0.74□□□□□ -2.29
XRN1-213ENST00000489241 SMG6Q86US8 1419 aaKnown RBP0.74□□□□□ -2.29
XRN1-213ENST00000489241 CORTO00230 105 aa0.74□□□□□ -2.29
XRN1-213ENST00000489241 SMIM6P0DI80 62 aa0.74□□□□□ -2.29
XRN1-213ENST00000489241 MRPS10P82664 201 aaKnown RBP0.74□□□□□ -2.29
XRN1-213ENST00000489241 C10orf128Q5T292 105 aa0.74□□□□□ -2.29
XRN1-213ENST00000489241 C9orf153Q5TBE3 101 aa0.74□□□□□ -2.29
XRN1-213ENST00000489241 C8orf59Q8N0T1 100 aaPredicted RBP0.74□□□□□ -2.29
XRN1-213ENST00000489241 TNS1Q9HBL0 1735 aaKnown RBP0.74□□□□□ -2.29
XRN1-213ENST00000489241 NAV3Q8IVL0 2385 aa0.74□□□□□ -2.29
XRN1-213ENST00000489241 NCOA3Q9Y6Q9 1424 aa0.73□□□□□ -2.29
XRN1-213ENST00000489241 KTN1Q86UP2 1357 aaKnown RBP0.73□□□□□ -2.29
XRN1-213ENST00000489241 PI4KAP42356 2102 aa0.73□□□□□ -2.29
XRN1-213ENST00000489241 GNG4P50150 75 aa0.73□□□□□ -2.29
XRN1-213ENST00000489241 PPP3R1P63098 170 aa0.73□□□□□ -2.29
XRN1-213ENST00000489241 VMO1Q7Z5L0 202 aa0.73□□□□□ -2.29
XRN1-213ENST00000489241 TTC9CQ8N5M4 171 aa0.73□□□□□ -2.29
XRN1-213ENST00000489241 TCHHQ07283 1943 aa0.73□□□□□ -2.29
XRN1-213ENST00000489241 MEGF8Q7Z7M0 2845 aa0.73□□□□□ -2.29
XRN1-213ENST00000489241 WDR7Q9Y4E6 1490 aa0.73□□□□□ -2.29
XRN1-213ENST00000489241 TMEM14DPA8MWL7 114 aa0.72□□□□□ -2.29
XRN1-213ENST00000489241 OOSP1A8MZH6 123 aa0.72□□□□□ -2.29
XRN1-213ENST00000489241 TNFP01375 233 aa0.72□□□□□ -2.29
XRN1-213ENST00000489241 WHAMMP3Q1A5X7 153 aa0.72□□□□□ -2.29
XRN1-213ENST00000489241 Q6ZRX8 168 aa0.72□□□□□ -2.29
XRN1-213ENST00000489241 SCP2D1Q9UJQ7 156 aa0.72□□□□□ -2.29
XRN1-213ENST00000489241 CUL7Q14999 1698 aa0.72□□□□□ -2.29
XRN1-213ENST00000489241 QRICH2Q9H0J4 1663 aa0.72□□□□□ -2.29
XRN1-213ENST00000489241 LRRC37A3O60309 1634 aa0.71□□□□□ -2.3
XRN1-213ENST00000489241 EIF4G3O43432 1585 aaKnown RBP0.71□□□□□ -2.3
XRN1-213ENST00000489241 PEG3Q9GZU2 1588 aa0.71□□□□□ -2.3
XRN1-213ENST00000489241 TRAV1-2A0A0B4J238 106 aa0.71□□□□□ -2.3
XRN1-213ENST00000489241 PPP1R17O96001 155 aa0.71□□□□□ -2.3
XRN1-213ENST00000489241 SVBPQ8N300 66 aa0.71□□□□□ -2.3
XRN1-213ENST00000489241 PXDNQ92626 1479 aa0.71□□□□□ -2.3
XRN1-213ENST00000489241 MYO7AQ13402 2215 aa0.7□□□□□ -2.3
XRN1-213ENST00000489241 ZMYM4Q5VZL5 1548 aa0.7□□□□□ -2.3
XRN1-213ENST00000489241 FRAS1Q86XX4 4008 aa0.7□□□□□ -2.3
XRN1-213ENST00000489241 FAM24AA6NFZ4 105 aa0.7□□□□□ -2.3
XRN1-213ENST00000489241 PRH1P02810 166 aa0.7□□□□□ -2.3
XRN1-213ENST00000489241 SPANXDQ9BXN6 97 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms