RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 TMEM262E9PQX1 116 aa9.28□□□□□ -0.92
VTI1A-206ENST00000489142 SMR3BP02814 79 aaPredicted RBP9.28□□□□□ -0.92
VTI1A-206ENST00000489142 SMIM17P0DL12 118 aa9.28□□□□□ -0.92
VTI1A-206ENST00000489142 TOR2AQ5JU69 321 aa9.28□□□□□ -0.92
VTI1A-206ENST00000489142 UBE2WQ96B02 151 aa9.28□□□□□ -0.92
VTI1A-206ENST00000489142 AP1S3Q96PC3 154 aa9.28□□□□□ -0.92
VTI1A-206ENST00000489142 VAX2Q9UIW0 290 aa9.28□□□□□ -0.92
VTI1A-206ENST00000489142 KIF25-AS1Q9Y6Z4 181 aa9.28□□□□□ -0.92
VTI1A-206ENST00000489142 TRBV6-8A0A0A6YYG3 113 aa9.27□□□□□ -0.93
VTI1A-206ENST00000489142 P01737 135 aa9.27□□□□□ -0.93
VTI1A-206ENST00000489142 ALKAL2Q6UX46 152 aa9.27□□□□□ -0.93
VTI1A-206ENST00000489142 NTN5Q8WTR8 489 aaPredicted RBP9.27□□□□□ -0.93
VTI1A-206ENST00000489142 EPM2AB3EWF7 344 aa9.26□□□□□ -0.93
VTI1A-206ENST00000489142 RPS20P60866 119 aaKnown RBP9.26□□□□□ -0.93
VTI1A-206ENST00000489142 MPV17L2Q567V2 206 aa9.26□□□□□ -0.93
VTI1A-206ENST00000489142 KCNIP4Q6PIL6 250 aa9.26□□□□□ -0.93
VTI1A-206ENST00000489142 LYZL1Q6UWQ5 148 aa9.26□□□□□ -0.93
VTI1A-206ENST00000489142 C15orf54Q8N8G6 183 aa9.26□□□□□ -0.93
VTI1A-206ENST00000489142 CHCHD5Q9BSY4 110 aa9.26□□□□□ -0.93
VTI1A-206ENST00000489142 FAM30AQ9NZY2 134 aa9.26□□□□□ -0.93
VTI1A-206ENST00000489142 K7EN84 100 aa9.25□□□□□ -0.93
VTI1A-206ENST00000489142 LINC01620Q4KN68 170 aa9.25□□□□□ -0.93
VTI1A-206ENST00000489142 Q5VSD8 79 aa9.25□□□□□ -0.93
VTI1A-206ENST00000489142 SUMO4Q6EEV6 95 aa9.25□□□□□ -0.93
VTI1A-206ENST00000489142 NTM-AS1Q6ZSK4 140 aa9.25□□□□□ -0.93
VTI1A-206ENST00000489142 DEFB104AQ8WTQ1 72 aa9.25□□□□□ -0.93
VTI1A-206ENST00000489142 SMIM12Q96EX1 92 aa9.25□□□□□ -0.93
VTI1A-206ENST00000489142 RNASE7Q9H1E1 156 aaKnown RBP9.25□□□□□ -0.93
VTI1A-206ENST00000489142 NKX2-5P52952 324 aaPredicted RBP9.24□□□□□ -0.93
VTI1A-206ENST00000489142 Q8N976 141 aa9.24□□□□□ -0.93
VTI1A-206ENST00000489142 NUDT10Q8NFP7 164 aa9.24□□□□□ -0.93
VTI1A-206ENST00000489142 RMI2Q96E14 147 aa9.24□□□□□ -0.93
VTI1A-206ENST00000489142 NUDT11Q96G61 164 aa9.24□□□□□ -0.93
VTI1A-206ENST00000489142 XKRY2A2RUG3 117 aa9.23□□□□□ -0.93
VTI1A-206ENST00000489142 M0QY20 66 aa9.23□□□□□ -0.93
VTI1A-206ENST00000489142 ANGP03950 147 aaKnown RBP9.23□□□□□ -0.93
VTI1A-206ENST00000489142 CACNG7P62955 275 aa9.23□□□□□ -0.93
VTI1A-206ENST00000489142 GAGE6Q13070 117 aa9.23□□□□□ -0.93
VTI1A-206ENST00000489142 CLPSL2Q6UWE3 100 aa9.23□□□□□ -0.93
VTI1A-206ENST00000489142 ENHOQ6UWT2 76 aa9.23□□□□□ -0.93
VTI1A-206ENST00000489142 OCC1Q8TAD7 63 aa9.23□□□□□ -0.93
VTI1A-206ENST00000489142 CHCHD7Q9BUK0 85 aa9.23□□□□□ -0.93
VTI1A-206ENST00000489142 A0A1B0GVG6 124 aa9.22□□□□□ -0.93
VTI1A-206ENST00000489142 NTF3P20783 257 aa9.22□□□□□ -0.93
VTI1A-206ENST00000489142 CEBPGP53567 150 aa9.22□□□□□ -0.93
VTI1A-206ENST00000489142 ELOBQ15370 118 aa9.22□□□□□ -0.93
VTI1A-206ENST00000489142 ATRAIDQ6UW56 229 aa9.22□□□□□ -0.93
VTI1A-206ENST00000489142 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.22□□□□□ -0.93
VTI1A-206ENST00000489142 TMEM70Q9BUB7 260 aa9.22□□□□□ -0.93
VTI1A-206ENST00000489142 RPP21Q9H633 154 aaKnown RBP9.22□□□□□ -0.93
VTI1A-206ENST00000489142 BIN3Q9NQY0 253 aa9.22□□□□□ -0.93
VTI1A-206ENST00000489142 COX11Q9Y6N1 276 aa9.22□□□□□ -0.93
VTI1A-206ENST00000489142 F2Z2F3 143 aa9.21□□□□□ -0.94
VTI1A-206ENST00000489142 CRPP02741 224 aa9.21□□□□□ -0.94
VTI1A-206ENST00000489142 TAGLN2P37802 199 aaKnown RBP9.21□□□□□ -0.94
VTI1A-206ENST00000489142 CTRLP40313 264 aa9.21□□□□□ -0.94
VTI1A-206ENST00000489142 FRZBQ92765 325 aa9.21□□□□□ -0.94
VTI1A-206ENST00000489142 TRGC1P0CF51 173 aa9.2□□□□□ -0.94
VTI1A-206ENST00000489142 BLOC1S1P78537 153 aa9.2□□□□□ -0.94
VTI1A-206ENST00000489142 Q0VG73 95 aa9.2□□□□□ -0.94
VTI1A-206ENST00000489142 TWIST1Q15672 202 aa9.2□□□□□ -0.94
VTI1A-206ENST00000489142 C1orf43Q9BWL3 253 aa9.2□□□□□ -0.94
VTI1A-206ENST00000489142 DPH3P1Q9H4G8 78 aa9.2□□□□□ -0.94
VTI1A-206ENST00000489142 TRBV25-1A0A075B6N4 114 aa9.19□□□□□ -0.94
VTI1A-206ENST00000489142 TRAV26-2A0A0B4J265 109 aa9.19□□□□□ -0.94
VTI1A-206ENST00000489142 H7C1H1 209 aa9.19□□□□□ -0.94
VTI1A-206ENST00000489142 HLA-DQA1P01909 254 aa9.19□□□□□ -0.94
VTI1A-206ENST00000489142 INAFM2P0DMQ5 153 aa9.19□□□□□ -0.94
VTI1A-206ENST00000489142 RBX1P62877 108 aa9.19□□□□□ -0.94
VTI1A-206ENST00000489142 RASL11AQ6T310 242 aa9.19□□□□□ -0.94
VTI1A-206ENST00000489142 GTSF1Q8WW33 167 aa9.19□□□□□ -0.94
VTI1A-206ENST00000489142 FAT1Q14517 4588 aa9.19□□□□□ -0.94
VTI1A-206ENST00000489142 IGHV1-24A0A0C4DH33 117 aa9.18□□□□□ -0.94
VTI1A-206ENST00000489142 FOXA3P55318 350 aaPredicted RBP9.18□□□□□ -0.94
VTI1A-206ENST00000489142 TMEM97Q5BJF2 176 aa9.18□□□□□ -0.94
VTI1A-206ENST00000489142 VPS13BQ7Z7G8 4022 aa9.18□□□□□ -0.94
VTI1A-206ENST00000489142 LINC00269Q8N2A0 174 aa9.18□□□□□ -0.94
VTI1A-206ENST00000489142 IQCJQ1A5X6 159 aa9.17□□□□□ -0.94
VTI1A-206ENST00000489142 LYPD6BQ8NI32 183 aa9.17□□□□□ -0.94
VTI1A-206ENST00000489142 TMEM250H0YL14 139 aa9.16□□□□□ -0.94
VTI1A-206ENST00000489142 GATCO43716 136 aaKnown RBP9.16□□□□□ -0.94
VTI1A-206ENST00000489142 PKIAP61925 76 aa9.16□□□□□ -0.94
VTI1A-206ENST00000489142 PGLYRP4Q96LB8 373 aa9.16□□□□□ -0.94
VTI1A-206ENST00000489142 CNFNQ9BYD5 112 aa9.16□□□□□ -0.94
VTI1A-206ENST00000489142 EIF5A2Q9GZV4 153 aaKnown RBP9.16□□□□□ -0.94
VTI1A-206ENST00000489142 NIT2Q9NQR4 276 aa9.16□□□□□ -0.94
VTI1A-206ENST00000489142 SRRM2Q9UQ35 2752 aaKnown RBP9.16□□□□□ -0.94
VTI1A-206ENST00000489142 IGLV10-54A0A075B6I4 117 aa9.15□□□□□ -0.94
VTI1A-206ENST00000489142 USP17L23D6RBM5 183 aa9.15□□□□□ -0.94
VTI1A-206ENST00000489142 FAM229AH3BQW9 127 aa9.15□□□□□ -0.94
VTI1A-206ENST00000489142 MIAQ16674 131 aa9.15□□□□□ -0.94
VTI1A-206ENST00000489142 WDR73Q6P4I2 378 aa9.15□□□□□ -0.94
VTI1A-206ENST00000489142 Q6ZSA8 131 aa9.15□□□□□ -0.94
VTI1A-206ENST00000489142 GATD1Q8NB37 220 aa9.15□□□□□ -0.94
VTI1A-206ENST00000489142 RPL39LQ96EH5 51 aaKnown RBP9.15□□□□□ -0.94
VTI1A-206ENST00000489142 TMEM243Q9BU79 118 aa9.15□□□□□ -0.94
VTI1A-206ENST00000489142 DNAH8Q96JB1 4490 aa9.15□□□□□ -0.94
VTI1A-206ENST00000489142 IGLV4-60A0A075B6I1 120 aa9.14□□□□□ -0.95
VTI1A-206ENST00000489142 C20orf203Q8NBC4 194 aa9.14□□□□□ -0.95
VTI1A-206ENST00000489142 SMIM7Q9BQ49 75 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 173.7 ms