RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 FAM19A1Q7Z5A9 133 aa1.37□□□□□ -2.19
ITGB1-214ENST00000488427 IQCF2Q8IXL9 164 aa1.37□□□□□ -2.19
ITGB1-214ENST00000488427 C10orf67Q8IYJ2 551 aa1.37□□□□□ -2.19
ITGB1-214ENST00000488427 S100A13Q99584 98 aa1.37□□□□□ -2.19
ITGB1-214ENST00000488427 YIPF3Q9GZM5 350 aa1.37□□□□□ -2.19
ITGB1-214ENST00000488427 METTL9Q9H1A3 318 aa1.37□□□□□ -2.19
ITGB1-214ENST00000488427 GTSF1LQ9H1H1 148 aa1.37□□□□□ -2.19
ITGB1-214ENST00000488427 TMBIM4Q9HC24 238 aa1.37□□□□□ -2.19
ITGB1-214ENST00000488427 HRASLSQ9HDD0 168 aa1.37□□□□□ -2.19
ITGB1-214ENST00000488427 UBE2D4Q9Y2X8 147 aa1.37□□□□□ -2.19
ITGB1-214ENST00000488427 ALG5Q9Y673 324 aa1.37□□□□□ -2.19
ITGB1-214ENST00000488427 MT-CO2P00403 227 aa1.36□□□□□ -2.19
ITGB1-214ENST00000488427 ANGP03950 147 aaKnown RBP1.36□□□□□ -2.19
ITGB1-214ENST00000488427 SFTA3P0C7M3 94 aa1.36□□□□□ -2.19
ITGB1-214ENST00000488427 TRAPPC2P0DI81 140 aa1.36□□□□□ -2.19
ITGB1-214ENST00000488427 TRAPPC2BP0DI82 140 aa1.36□□□□□ -2.19
ITGB1-214ENST00000488427 POLR2GP62487 172 aaKnown RBP eCLIP1.36□□□□□ -2.19
ITGB1-214ENST00000488427 MRPS25P82663 173 aaKnown RBP1.36□□□□□ -2.19
ITGB1-214ENST00000488427 TNFAIP8L3Q5GJ75 292 aa1.36□□□□□ -2.19
ITGB1-214ENST00000488427 OR51A2Q8NGJ7 313 aa1.36□□□□□ -2.19
ITGB1-214ENST00000488427 OR10J5Q8NHC4 309 aa1.36□□□□□ -2.19
ITGB1-214ENST00000488427 LSM10Q969L4 123 aaKnown RBP1.36□□□□□ -2.19
ITGB1-214ENST00000488427 ARMC1Q9NVT9 282 aa1.36□□□□□ -2.19
ITGB1-214ENST00000488427 BAIAP2Q9UQB8 552 aa1.36□□□□□ -2.19
ITGB1-214ENST00000488427 PRELID3BQ9Y3B1 194 aa1.36□□□□□ -2.19
ITGB1-214ENST00000488427 FAM32AQ9Y421 112 aaKnown RBP1.36□□□□□ -2.19
ITGB1-214ENST00000488427 RBM7Q9Y580 266 aaKnown RBP1.36□□□□□ -2.19
ITGB1-214ENST00000488427 A0A087WX48 190 aa1.35□□□□□ -2.19
ITGB1-214ENST00000488427 B4DEV8 164 aa1.35□□□□□ -2.19
ITGB1-214ENST00000488427 PSMA1P25786 263 aaKnown RBP1.35□□□□□ -2.19
ITGB1-214ENST00000488427 NUP62P37198 522 aaPredicted RBP1.35□□□□□ -2.19
ITGB1-214ENST00000488427 IFNGR2P38484 337 aa1.35□□□□□ -2.19
ITGB1-214ENST00000488427 RPL14P50914 215 aaKnown RBP1.35□□□□□ -2.19
ITGB1-214ENST00000488427 TCL1AP56279 114 aa1.35□□□□□ -2.19
ITGB1-214ENST00000488427 GABARAPL2P60520 117 aa1.35□□□□□ -2.19
ITGB1-214ENST00000488427 CXCR4P61073 352 aa1.35□□□□□ -2.19
ITGB1-214ENST00000488427 SELENOWP63302 87 aa1.35□□□□□ -2.19
ITGB1-214ENST00000488427 HLA-DRB3P79483 266 aa1.35□□□□□ -2.19
ITGB1-214ENST00000488427 HIST1H1AQ02539 215 aaPredicted RBP1.35□□□□□ -2.19
ITGB1-214ENST00000488427 TMEM244Q5VVB8 128 aa1.35□□□□□ -2.19
ITGB1-214ENST00000488427 ZFAND2AQ8N6M9 145 aa1.35□□□□□ -2.19
ITGB1-214ENST00000488427 GNPDA2Q8TDQ7 276 aa1.35□□□□□ -2.19
ITGB1-214ENST00000488427 PECRQ9BY49 303 aa1.35□□□□□ -2.19
ITGB1-214ENST00000488427 CMC2Q9NRP2 79 aa1.35□□□□□ -2.19
ITGB1-214ENST00000488427 BET1LQ9NYM9 111 aa1.35□□□□□ -2.19
ITGB1-214ENST00000488427 IL20Q9NYY1 176 aa1.35□□□□□ -2.19
ITGB1-214ENST00000488427 PKIGQ9Y2B9 76 aa1.35□□□□□ -2.19
ITGB1-214ENST00000488427 MUC21A0A140T8X8 626 aa1.34□□□□□ -2.19
ITGB1-214ENST00000488427 RAB19A4D1S5 217 aa1.34□□□□□ -2.19
ITGB1-214ENST00000488427 OR4C45A6NMZ5 311 aa1.34□□□□□ -2.19
ITGB1-214ENST00000488427 CD164Q04900 197 aa1.34□□□□□ -2.19
ITGB1-214ENST00000488427 MRPL52Q86TS9 123 aaKnown RBP1.34□□□□□ -2.19
ITGB1-214ENST00000488427 OR5D14Q8NGL3 314 aa1.34□□□□□ -2.19
ITGB1-214ENST00000488427 OR1L8Q8NGR8 309 aa1.34□□□□□ -2.19
ITGB1-214ENST00000488427 CGREF1Q99674 301 aa1.34□□□□□ -2.19
ITGB1-214ENST00000488427 MGLLQ99685 303 aa1.34□□□□□ -2.19
ITGB1-214ENST00000488427 BCL7BQ9BQE9 202 aa1.34□□□□□ -2.19
ITGB1-214ENST00000488427 SLC50A1Q9BRV3 221 aa1.34□□□□□ -2.19
ITGB1-214ENST00000488427 TMEM222Q9H0R3 208 aa1.34□□□□□ -2.19
ITGB1-214ENST00000488427 NDUFA12Q9UI09 145 aa1.34□□□□□ -2.19
ITGB1-214ENST00000488427 A0A087WWC5 75 aa1.33□□□□□ -2.2
ITGB1-214ENST00000488427 TRAV12-3A0A0B4J271 114 aa1.33□□□□□ -2.2
ITGB1-214ENST00000488427 GRIFINA4D1Z8 144 aa1.33□□□□□ -2.2
ITGB1-214ENST00000488427 GADD45GO95257 159 aa1.33□□□□□ -2.2
ITGB1-214ENST00000488427 ATP6V0CP27449 155 aa1.33□□□□□ -2.2
ITGB1-214ENST00000488427 RCVRNP35243 200 aa1.33□□□□□ -2.2
ITGB1-214ENST00000488427 MT4P47944 62 aa1.33□□□□□ -2.2
ITGB1-214ENST00000488427 SERPINB10P48595 397 aa1.33□□□□□ -2.2
ITGB1-214ENST00000488427 MIAQ16674 131 aa1.33□□□□□ -2.2
ITGB1-214ENST00000488427 BSXQ3C1V8 233 aa1.33□□□□□ -2.2
ITGB1-214ENST00000488427 EIF5AL1Q6IS14 154 aaKnown RBP1.33□□□□□ -2.2
ITGB1-214ENST00000488427 ENHOQ6UWT2 76 aa1.33□□□□□ -2.2
ITGB1-214ENST00000488427 LHFPL5Q8TAF8 219 aa1.33□□□□□ -2.2
ITGB1-214ENST00000488427 Q8WTZ3 238 aa1.33□□□□□ -2.2
ITGB1-214ENST00000488427 TMEM56Q96MV1 263 aa1.33□□□□□ -2.2
ITGB1-214ENST00000488427 Q9BRP9 147 aa1.33□□□□□ -2.2
ITGB1-214ENST00000488427 PRADC1Q9BSG0 188 aa1.33□□□□□ -2.2
ITGB1-214ENST00000488427 DCSTAMPQ9H295 470 aa1.33□□□□□ -2.2
ITGB1-214ENST00000488427 MIXL1Q9H2W2 232 aa1.33□□□□□ -2.2
ITGB1-214ENST00000488427 NDUFA4L2Q9NRX3 87 aa1.33□□□□□ -2.2
ITGB1-214ENST00000488427 TP73-AS1Q9UF72 201 aa1.33□□□□□ -2.2
ITGB1-214ENST00000488427 UTP11Q9Y3A2 253 aaKnown RBP1.33□□□□□ -2.2
ITGB1-214ENST00000488427 TRAV30A0A087WSZ9 112 aa1.32□□□□□ -2.2
ITGB1-214ENST00000488427 TRAV4A0A0B4J268 109 aa1.32□□□□□ -2.2
ITGB1-214ENST00000488427 TEX50A0A1B0GTY4 177 aa1.32□□□□□ -2.2
ITGB1-214ENST00000488427 TRPC5OSA6NMA1 111 aa1.32□□□□□ -2.2
ITGB1-214ENST00000488427 ZNF670-ZNF695F2Z2N8 137 aa1.32□□□□□ -2.2
ITGB1-214ENST00000488427 SMIM11AP58511 58 aa1.32□□□□□ -2.2
ITGB1-214ENST00000488427 RAB31Q13636 194 aa1.32□□□□□ -2.2
ITGB1-214ENST00000488427 RHOHQ15669 191 aa1.32□□□□□ -2.2
ITGB1-214ENST00000488427 PHF5AQ7RTV0 110 aaKnown RBP1.32□□□□□ -2.2
ITGB1-214ENST00000488427 OR51A4Q8NGJ6 313 aa1.32□□□□□ -2.2
ITGB1-214ENST00000488427 LRRC20Q8TCA0 184 aa1.32□□□□□ -2.2
ITGB1-214ENST00000488427 BANF2Q9H503 90 aa1.32□□□□□ -2.2
ITGB1-214ENST00000488427 TMEM138Q9NPI0 162 aa1.32□□□□□ -2.2
ITGB1-214ENST00000488427 COMMD9Q9P000 198 aa1.32□□□□□ -2.2
ITGB1-214ENST00000488427 CCDC167Q9P0B6 97 aa1.32□□□□□ -2.2
ITGB1-214ENST00000488427 SNX12Q9UMY4 172 aa1.32□□□□□ -2.2
ITGB1-214ENST00000488427 CHTOPQ9Y3Y2 248 aaKnown RBP1.32□□□□□ -2.2
ITGB1-214ENST00000488427 IGHV3-73A0A0B4J1V6 119 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms