RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 TRBV7-3A0A075B6L6 115 aa7.57□□□□□ -1.2
UBE4B-210ENST00000488228 IGHV3-38A0A0C4DH36 116 aa7.57□□□□□ -1.2
UBE4B-210ENST00000488228 CAMPP49913 170 aa7.57□□□□□ -1.2
UBE4B-210ENST00000488228 UBE2D3P61077 147 aa7.57□□□□□ -1.2
UBE4B-210ENST00000488228 UBE2D2P62837 147 aa7.57□□□□□ -1.2
UBE4B-210ENST00000488228 ANAPC16Q96DE5 110 aa7.57□□□□□ -1.2
UBE4B-210ENST00000488228 KRTAP1-5Q9BYS1 174 aa7.57□□□□□ -1.2
UBE4B-210ENST00000488228 H7C1H1 209 aa7.56□□□□□ -1.2
UBE4B-210ENST00000488228 TIRAPP58753 221 aa7.56□□□□□ -1.2
UBE4B-210ENST00000488228 RASL11AQ6T310 242 aa7.56□□□□□ -1.2
UBE4B-210ENST00000488228 AMN1Q8IY45 258 aa7.56□□□□□ -1.2
UBE4B-210ENST00000488228 GATD1Q8NB37 220 aa7.56□□□□□ -1.2
UBE4B-210ENST00000488228 RPL39LQ96EH5 51 aaKnown RBP7.56□□□□□ -1.2
UBE4B-210ENST00000488228 TMEM191AQ9H0A3 160 aa7.56□□□□□ -1.2
UBE4B-210ENST00000488228 GTSF1LQ9H1H1 148 aa7.56□□□□□ -1.2
UBE4B-210ENST00000488228 DNAH17Q9UFH2 4485 aa7.55□□□□□ -1.2
UBE4B-210ENST00000488228 A0A1B0GXF2 115 aa7.55□□□□□ -1.2
UBE4B-210ENST00000488228 SIVA1O15304 175 aa7.55□□□□□ -1.2
UBE4B-210ENST00000488228 GAS8-AS1O95177 125 aa7.55□□□□□ -1.2
UBE4B-210ENST00000488228 NCR2O95944 276 aa7.55□□□□□ -1.2
UBE4B-210ENST00000488228 OR10J3Q5JRS4 329 aa7.55□□□□□ -1.2
UBE4B-210ENST00000488228 Q6ZR54 194 aa7.55□□□□□ -1.2
UBE4B-210ENST00000488228 RNF185Q96GF1 192 aa7.55□□□□□ -1.2
UBE4B-210ENST00000488228 Q9H8V8 135 aa7.55□□□□□ -1.2
UBE4B-210ENST00000488228 NBDYA0A0U1RRE5 68 aa7.54□□□□□ -1.2
UBE4B-210ENST00000488228 C7orf77A4D0Y5 90 aa7.54□□□□□ -1.2
UBE4B-210ENST00000488228 SMKR1H3BMG3 65 aa7.54□□□□□ -1.2
UBE4B-210ENST00000488228 APOC3P02656 99 aa7.54□□□□□ -1.2
UBE4B-210ENST00000488228 HBBP68871 147 aa7.54□□□□□ -1.2
UBE4B-210ENST00000488228 LELP1Q5T871 98 aa7.54□□□□□ -1.2
UBE4B-210ENST00000488228 SLC7A5P1Q8MH63 180 aa7.54□□□□□ -1.2
UBE4B-210ENST00000488228 Q8N3U1 123 aa7.54□□□□□ -1.2
UBE4B-210ENST00000488228 CLRN3Q8NCR9 226 aa7.54□□□□□ -1.2
UBE4B-210ENST00000488228 TNFRSF18Q9Y5U5 241 aa7.54□□□□□ -1.2
UBE4B-210ENST00000488228 FAT2Q9NYQ8 4349 aa7.53□□□□□ -1.2
UBE4B-210ENST00000488228 A0A1B0GW15 77 aa7.53□□□□□ -1.2
UBE4B-210ENST00000488228 RAB4AP20338 218 aa7.53□□□□□ -1.2
UBE4B-210ENST00000488228 RPS10P46783 165 aaKnown RBP7.53□□□□□ -1.2
UBE4B-210ENST00000488228 RHEBQ15382 184 aa7.53□□□□□ -1.2
UBE4B-210ENST00000488228 NDUFA5Q16718 116 aa7.53□□□□□ -1.2
UBE4B-210ENST00000488228 ATP5L2Q7Z4Y8 100 aa7.53□□□□□ -1.2
UBE4B-210ENST00000488228 DEFB104AQ8WTQ1 72 aa7.53□□□□□ -1.2
UBE4B-210ENST00000488228 DNAJC30Q96LL9 226 aa7.53□□□□□ -1.2
UBE4B-210ENST00000488228 CTDSP1Q9GZU7 261 aa7.53□□□□□ -1.2
UBE4B-210ENST00000488228 NIT2Q9NQR4 276 aa7.53□□□□□ -1.2
UBE4B-210ENST00000488228 TRAV8-6A0A0B4J262 113 aa7.52□□□□□ -1.21
UBE4B-210ENST00000488228 MRPL51Q4U2R6 128 aaKnown RBP7.52□□□□□ -1.21
UBE4B-210ENST00000488228 TTC32Q5I0X7 151 aa7.52□□□□□ -1.21
UBE4B-210ENST00000488228 FAM104BQ5XKR9 115 aa7.52□□□□□ -1.21
UBE4B-210ENST00000488228 RPS10P5Q9NQ39 176 aa7.52□□□□□ -1.21
UBE4B-210ENST00000488228 URGCP-MRPS24S4R325 110 aa7.52□□□□□ -1.21
UBE4B-210ENST00000488228 A0A087WWC5 75 aa7.51□□□□□ -1.21
UBE4B-210ENST00000488228 IGHV3-30P01768 117 aa7.51□□□□□ -1.21
UBE4B-210ENST00000488228 IGHV3-33P01772 117 aa7.51□□□□□ -1.21
UBE4B-210ENST00000488228 S100A8P05109 93 aa7.51□□□□□ -1.21
UBE4B-210ENST00000488228 DNAH10OSP0CZ25 163 aa7.51□□□□□ -1.21
UBE4B-210ENST00000488228 IGHV3-30-3P0DP02 117 aa7.51□□□□□ -1.21
UBE4B-210ENST00000488228 IGHV3-30-5P0DP03 117 aa7.51□□□□□ -1.21
UBE4B-210ENST00000488228 KCNIP4Q6PIL6 250 aa7.51□□□□□ -1.21
UBE4B-210ENST00000488228 DAZ4Q86SG3 579 aaKnown RBP7.51□□□□□ -1.21
UBE4B-210ENST00000488228 SVBPQ8N300 66 aa7.51□□□□□ -1.21
UBE4B-210ENST00000488228 MRAP2Q96G30 205 aa7.51□□□□□ -1.21
UBE4B-210ENST00000488228 BTF3L4Q96K17 158 aa7.51□□□□□ -1.21
UBE4B-210ENST00000488228 DAZ3Q9NR90 486 aaKnown RBP7.51□□□□□ -1.21
UBE4B-210ENST00000488228 TRBV6-8A0A0A6YYG3 113 aa7.5□□□□□ -1.21
UBE4B-210ENST00000488228 SDHAF1A6NFY7 115 aa7.5□□□□□ -1.21
UBE4B-210ENST00000488228 SNAPINO95295 136 aa7.5□□□□□ -1.21
UBE4B-210ENST00000488228 NTM-AS1Q6ZSK4 140 aa7.5□□□□□ -1.21
UBE4B-210ENST00000488228 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.5□□□□□ -1.21
UBE4B-210ENST00000488228 IMMP2LQ96T52 175 aa7.5□□□□□ -1.21
UBE4B-210ENST00000488228 EPPK1P58107 5090 aaKnown RBP7.5□□□□□ -1.21
UBE4B-210ENST00000488228 TMEM238LA0A1B0GVL6 79 aa7.49□□□□□ -1.21
UBE4B-210ENST00000488228 LINC01556Q5JQF7 62 aa7.49□□□□□ -1.21
UBE4B-210ENST00000488228 NRACQ8N912 160 aa7.49□□□□□ -1.21
UBE4B-210ENST00000488228 FRZBQ92765 325 aa7.49□□□□□ -1.21
UBE4B-210ENST00000488228 TMEM242Q9NWH2 141 aa7.49□□□□□ -1.21
UBE4B-210ENST00000488228 HECTD4Q9Y4D8 3996 aa7.48□□□□□ -1.21
UBE4B-210ENST00000488228 TRBV6-5A0A0K0K1A5 114 aa7.48□□□□□ -1.21
UBE4B-210ENST00000488228 D6R8Y8 96 aa7.48□□□□□ -1.21
UBE4B-210ENST00000488228 RTL8CO15255 209 aa7.48□□□□□ -1.21
UBE4B-210ENST00000488228 S100PP25815 95 aa7.48□□□□□ -1.21
UBE4B-210ENST00000488228 C1orf134Q5TEV5 83 aa7.48□□□□□ -1.21
UBE4B-210ENST00000488228 ATRAIDQ6UW56 229 aa7.48□□□□□ -1.21
UBE4B-210ENST00000488228 NIT1Q86X76 327 aa7.48□□□□□ -1.21
UBE4B-210ENST00000488228 CHCHD5Q9BSY4 110 aa7.48□□□□□ -1.21
UBE4B-210ENST00000488228 TMEM70Q9BUB7 260 aa7.48□□□□□ -1.21
UBE4B-210ENST00000488228 ST20Q9HBF5 79 aa7.48□□□□□ -1.21
UBE4B-210ENST00000488228 TRBV25-1A0A075B6N4 114 aa7.47□□□□□ -1.21
UBE4B-210ENST00000488228 TRAV9-1A0A075B6T8 112 aa7.47□□□□□ -1.21
UBE4B-210ENST00000488228 IGHV1-24A0A0C4DH33 117 aa7.47□□□□□ -1.21
UBE4B-210ENST00000488228 NPYP01303 97 aa7.47□□□□□ -1.21
UBE4B-210ENST00000488228 CKS2P33552 79 aa7.47□□□□□ -1.21
UBE4B-210ENST00000488228 AMTP48728 403 aa7.47□□□□□ -1.21
UBE4B-210ENST00000488228 GAGE6Q13070 117 aa7.47□□□□□ -1.21
UBE4B-210ENST00000488228 COTL1Q14019 142 aa7.47□□□□□ -1.21
UBE4B-210ENST00000488228 IQCJQ1A5X6 159 aa7.47□□□□□ -1.21
UBE4B-210ENST00000488228 MPV17L2Q567V2 206 aa7.47□□□□□ -1.21
UBE4B-210ENST00000488228 TMEM97Q5BJF2 176 aa7.47□□□□□ -1.21
UBE4B-210ENST00000488228 TMEM136Q6ZRR5 245 aa7.47□□□□□ -1.21
UBE4B-210ENST00000488228 C6orf223Q8N319 242 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms