RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 IGLC6P0CF74 106 aa12.68□□□□□ -0.38
CD55-209ENST00000488171 GZMBP10144 247 aa12.68□□□□□ -0.38
CD55-209ENST00000488171 SULT1A2P50226 295 aa12.68□□□□□ -0.38
CD55-209ENST00000488171 Q0VG73 95 aa12.68□□□□□ -0.38
CD55-209ENST00000488171 LINC01620Q4KN68 170 aa12.68□□□□□ -0.38
CD55-209ENST00000488171 MPV17L2Q567V2 206 aa12.68□□□□□ -0.38
CD55-209ENST00000488171 ENHOQ6UWT2 76 aa12.68□□□□□ -0.38
CD55-209ENST00000488171 Q8N976 141 aa12.68□□□□□ -0.38
CD55-209ENST00000488171 HERC1Q15751 4861 aa12.67□□□□□ -0.38
CD55-209ENST00000488171 RAB19A4D1S5 217 aa12.67□□□□□ -0.38
CD55-209ENST00000488171 C19orf71A6NCJ1 209 aa12.67□□□□□ -0.38
CD55-209ENST00000488171 RBFOX3A6NFN3 312 aa12.67□□□□□ -0.38
CD55-209ENST00000488171 EIF5AL1Q6IS14 154 aaKnown RBP12.67□□□□□ -0.38
CD55-209ENST00000488171 NTM-AS1Q6ZSK4 140 aa12.67□□□□□ -0.38
CD55-209ENST00000488171 AP1S3Q96PC3 154 aa12.67□□□□□ -0.38
CD55-209ENST00000488171 VAX2Q9UIW0 290 aa12.67□□□□□ -0.38
CD55-209ENST00000488171 SRRM2Q9UQ35 2752 aaKnown RBP12.66□□□□□ -0.38
CD55-209ENST00000488171 C15orf54Q8N8G6 183 aa12.66□□□□□ -0.38
CD55-209ENST00000488171 TEX46H3BTG2 121 aa12.65□□□□□ -0.38
CD55-209ENST00000488171 SMIM17P0DL12 118 aa12.65□□□□□ -0.38
CD55-209ENST00000488171 MEF2BQ02080 365 aaPredicted RBP12.65□□□□□ -0.38
CD55-209ENST00000488171 TCTE3Q8IZS6 198 aa12.65□□□□□ -0.38
CD55-209ENST00000488171 FER1L6-AS1Q8NA97 138 aa12.65□□□□□ -0.38
CD55-209ENST00000488171 OR2D3Q8NGH3 330 aa12.65□□□□□ -0.38
CD55-209ENST00000488171 SMIM12Q96EX1 92 aa12.65□□□□□ -0.38
CD55-209ENST00000488171 TRBV20OR9-2A0A075B6H5 130 aa12.64□□□□□ -0.39
CD55-209ENST00000488171 GNG4P50150 75 aa12.64□□□□□ -0.39
CD55-209ENST00000488171 RPS20P60866 119 aaKnown RBP12.64□□□□□ -0.39
CD55-209ENST00000488171 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.64□□□□□ -0.39
CD55-209ENST00000488171 DAZAP1Q96EP5 407 aaKnown RBP12.64□□□□□ -0.39
CD55-209ENST00000488171 CHCHD5Q9BSY4 110 aa12.64□□□□□ -0.39
CD55-209ENST00000488171 TPPP3Q9BW30 176 aa12.64□□□□□ -0.39
CD55-209ENST00000488171 C1orf43Q9BWL3 253 aa12.64□□□□□ -0.39
CD55-209ENST00000488171 MYCBP2O75592 4640 aa12.64□□□□□ -0.39
CD55-209ENST00000488171 PDE6DO43924 150 aa12.63□□□□□ -0.39
CD55-209ENST00000488171 ANGP03950 147 aaKnown RBP12.63□□□□□ -0.39
CD55-209ENST00000488171 M0QY20 66 aa12.62□□□□□ -0.39
CD55-209ENST00000488171 CRPP02741 224 aa12.62□□□□□ -0.39
CD55-209ENST00000488171 TMEM97Q5BJF2 176 aa12.62□□□□□ -0.39
CD55-209ENST00000488171 MGPP08493 103 aa12.61□□□□□ -0.39
CD55-209ENST00000488171 BCL2P10415 239 aa12.61□□□□□ -0.39
CD55-209ENST00000488171 PKIAP61925 76 aa12.61□□□□□ -0.39
CD55-209ENST00000488171 CACNG7P62955 275 aa12.61□□□□□ -0.39
CD55-209ENST00000488171 MED9Q9NWA0 146 aa12.61□□□□□ -0.39
CD55-209ENST00000488171 IFNA1P01562 189 aa12.6□□□□□ -0.39
CD55-209ENST00000488171 P01737 135 aa12.6□□□□□ -0.39
CD55-209ENST00000488171 SUMO4Q6EEV6 95 aa12.6□□□□□ -0.39
CD55-209ENST00000488171 SCXQ7RTU7 201 aa12.6□□□□□ -0.39
CD55-209ENST00000488171 SLC51BQ86UW2 128 aa12.6□□□□□ -0.39
CD55-209ENST00000488171 LINC00528Q8N1L1 170 aa12.6□□□□□ -0.39
CD55-209ENST00000488171 RBX1P62877 108 aa12.59□□□□□ -0.39
CD55-209ENST00000488171 GAGE6Q13070 117 aa12.59□□□□□ -0.39
CD55-209ENST00000488171 PRR34Q9NV39 138 aa12.59□□□□□ -0.39
CD55-209ENST00000488171 FLG2Q5D862 2391 aaPredicted RBP12.58□□□□□ -0.39
CD55-209ENST00000488171 TRBV25-1A0A075B6N4 114 aa12.58□□□□□ -0.4
CD55-209ENST00000488171 XKRY2A2RUG3 117 aa12.58□□□□□ -0.4
CD55-209ENST00000488171 F2Z2F3 143 aa12.58□□□□□ -0.4
CD55-209ENST00000488171 MIAQ16674 131 aa12.58□□□□□ -0.4
CD55-209ENST00000488171 IQCJQ1A5X6 159 aa12.58□□□□□ -0.4
CD55-209ENST00000488171 C14orf177Q52M58 125 aa12.58□□□□□ -0.4
CD55-209ENST00000488171 LYZL1Q6UWQ5 148 aa12.58□□□□□ -0.4
CD55-209ENST00000488171 H7C1H1 209 aa12.57□□□□□ -0.4
CD55-209ENST00000488171 PLA2G1BP04054 148 aaKnown RBP12.57□□□□□ -0.4
CD55-209ENST00000488171 BIN3Q9NQY0 253 aa12.57□□□□□ -0.4
CD55-209ENST00000488171 IGHV1-24A0A0C4DH33 117 aa12.56□□□□□ -0.4
CD55-209ENST00000488171 HLA-DQA1P01909 254 aa12.56□□□□□ -0.4
CD55-209ENST00000488171 NTF3P20783 257 aa12.56□□□□□ -0.4
CD55-209ENST00000488171 KRTAP26-1Q6PEX3 210 aa12.56□□□□□ -0.4
CD55-209ENST00000488171 CLPSL2Q6UWE3 100 aa12.56□□□□□ -0.4
CD55-209ENST00000488171 LINC00269Q8N2A0 174 aa12.56□□□□□ -0.4
CD55-209ENST00000488171 NUDT10Q8NFP7 164 aa12.56□□□□□ -0.4
CD55-209ENST00000488171 NUDT11Q96G61 164 aa12.56□□□□□ -0.4
CD55-209ENST00000488171 CHAC1Q9BUX1 264 aa12.56□□□□□ -0.4
CD55-209ENST00000488171 DMBT1Q9UGM3 2413 aaPredicted RBP12.56□□□□□ -0.4
CD55-209ENST00000488171 USP17L23D6RBM5 183 aa12.56□□□□□ -0.4
CD55-209ENST00000488171 TRGC1P0CF51 173 aa12.56□□□□□ -0.4
CD55-209ENST00000488171 NKX2-5P52952 324 aaPredicted RBP12.56□□□□□ -0.4
CD55-209ENST00000488171 RASL11AQ6T310 242 aa12.56□□□□□ -0.4
CD55-209ENST00000488171 C9orf62Q8N4C0 152 aa12.56□□□□□ -0.4
CD55-209ENST00000488171 TAGLN2P37802 199 aaKnown RBP12.55□□□□□ -0.4
CD55-209ENST00000488171 CTRLP40313 264 aa12.55□□□□□ -0.4
CD55-209ENST00000488171 CIRBP-AS1Q8TBR5 109 aa12.55□□□□□ -0.4
CD55-209ENST00000488171 DPH3P1Q9H4G8 78 aa12.55□□□□□ -0.4
CD55-209ENST00000488171 K7EN84 100 aa12.54□□□□□ -0.4
CD55-209ENST00000488171 WDR73Q6P4I2 378 aa12.54□□□□□ -0.4
CD55-209ENST00000488171 Q6ZNX1 250 aa12.54□□□□□ -0.4
CD55-209ENST00000488171 PRSS1P07477 247 aa12.53□□□□□ -0.4
CD55-209ENST00000488171 OCC1Q8TAD7 63 aa12.53□□□□□ -0.4
CD55-209ENST00000488171 CNFNQ9BYD5 112 aa12.53□□□□□ -0.4
CD55-209ENST00000488171 NIT2Q9NQR4 276 aa12.53□□□□□ -0.4
CD55-209ENST00000488171 C20orf203Q8NBC4 194 aa12.52□□□□□ -0.41
CD55-209ENST00000488171 PGLYRP4Q96LB8 373 aa12.52□□□□□ -0.41
CD55-209ENST00000488171 RNASE7Q9H1E1 156 aaKnown RBP12.52□□□□□ -0.41
CD55-209ENST00000488171 RPP21Q9H633 154 aaKnown RBP12.52□□□□□ -0.41
CD55-209ENST00000488171 KRTAP10-4P60372 401 aaPredicted RBP12.51□□□□□ -0.41
CD55-209ENST00000488171 REG3AQ06141 175 aa12.51□□□□□ -0.41
CD55-209ENST00000488171 DEFB104AQ8WTQ1 72 aa12.51□□□□□ -0.41
CD55-209ENST00000488171 TMEM243Q9BU79 118 aa12.51□□□□□ -0.41
CD55-209ENST00000488171 IGLV4-60A0A075B6I1 120 aa12.5□□□□□ -0.41
CD55-209ENST00000488171 TWIST1Q15672 202 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms