RNA–Protein interactions for RNA: ENST00000487952.1

NUP188-207, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-207ENST00000487952 ZNRF2Q8NHG8 242 aa9.8□□□□□ -0.84
NUP188-207ENST00000487952 RNF185Q96GF1 192 aa9.8□□□□□ -0.84
NUP188-207ENST00000487952 APLNQ9ULZ1 77 aa9.8□□□□□ -0.84
NUP188-207ENST00000487952 TNFRSF18Q9Y5U5 241 aa9.8□□□□□ -0.84
NUP188-207ENST00000487952 TRBV24-1A0A075B6N3 115 aa9.79□□□□□ -0.84
NUP188-207ENST00000487952 TGIF2-C20orf24A0A0A6YYL0 155 aa9.79□□□□□ -0.84
NUP188-207ENST00000487952 HLA-DQA1P01909 254 aa9.79□□□□□ -0.84
NUP188-207ENST00000487952 MRPL51Q4U2R6 128 aaKnown RBP9.79□□□□□ -0.84
NUP188-207ENST00000487952 NEXN-AS1Q8NBZ9 246 aa9.79□□□□□ -0.84
NUP188-207ENST00000487952 DNAJC30Q96LL9 226 aa9.79□□□□□ -0.84
NUP188-207ENST00000487952 NIT2Q9NQR4 276 aa9.79□□□□□ -0.84
NUP188-207ENST00000487952 TRBV7-3A0A075B6L6 115 aa9.78□□□□□ -0.84
NUP188-207ENST00000487952 MT-ND6P03923 174 aa9.78□□□□□ -0.84
NUP188-207ENST00000487952 CKS2P33552 79 aa9.78□□□□□ -0.84
NUP188-207ENST00000487952 OR10J3Q5JRS4 329 aa9.78□□□□□ -0.84
NUP188-207ENST00000487952 TMEM136Q6ZRR5 245 aa9.78□□□□□ -0.84
NUP188-207ENST00000487952 ATP6V0E2Q8NHE4 81 aa9.78□□□□□ -0.84
NUP188-207ENST00000487952 GNB1LQ9BYB4 327 aa9.78□□□□□ -0.84
NUP188-207ENST00000487952 DNAH7Q8WXX0 4024 aa9.78□□□□□ -0.84
NUP188-207ENST00000487952 SMKR1H3BMG3 65 aa9.77□□□□□ -0.85
NUP188-207ENST00000487952 NCR2O95944 276 aa9.77□□□□□ -0.85
NUP188-207ENST00000487952 PPP1R17O96001 155 aa9.77□□□□□ -0.85
NUP188-207ENST00000487952 PPBPP02775 128 aa9.77□□□□□ -0.85
NUP188-207ENST00000487952 UBE2DNLQ8IWF7 75 aa9.77□□□□□ -0.85
NUP188-207ENST00000487952 SCO1O75880 301 aa9.76□□□□□ -0.85
NUP188-207ENST00000487952 APCSP02743 223 aa9.76□□□□□ -0.85
NUP188-207ENST00000487952 CCL18P55774 89 aa9.76□□□□□ -0.85
NUP188-207ENST00000487952 ORMDL3Q8N138 153 aa9.76□□□□□ -0.85
NUP188-207ENST00000487952 RPL39LQ96EH5 51 aaKnown RBP9.76□□□□□ -0.85
NUP188-207ENST00000487952 Q9UF83 564 aa9.76□□□□□ -0.85
NUP188-207ENST00000487952 D6R8Y8 96 aa9.75□□□□□ -0.85
NUP188-207ENST00000487952 LINC00694P0DN24 101 aa9.75□□□□□ -0.85
NUP188-207ENST00000487952 UBE2D3P61077 147 aa9.75□□□□□ -0.85
NUP188-207ENST00000487952 UBE2D2P62837 147 aa9.75□□□□□ -0.85
NUP188-207ENST00000487952 YPEL4Q96NS1 127 aa9.75□□□□□ -0.85
NUP188-207ENST00000487952 ST20Q9HBF5 79 aa9.75□□□□□ -0.85
NUP188-207ENST00000487952 FABP9Q0Z7S8 132 aa9.74□□□□□ -0.85
NUP188-207ENST00000487952 PRELID3AQ96N28 172 aa9.74□□□□□ -0.85
NUP188-207ENST00000487952 MRPL18Q9H0U6 180 aaKnown RBP9.74□□□□□ -0.85
NUP188-207ENST00000487952 GTSF1LQ9H1H1 148 aa9.74□□□□□ -0.85
NUP188-207ENST00000487952 TRAPPC1Q9Y5R8 145 aa9.74□□□□□ -0.85
NUP188-207ENST00000487952 IGHV3-38A0A0C4DH36 116 aa9.73□□□□□ -0.85
NUP188-207ENST00000487952 TRBV6-5A0A0K0K1A5 114 aa9.73□□□□□ -0.85
NUP188-207ENST00000487952 GAS8-AS1O95177 125 aa9.73□□□□□ -0.85
NUP188-207ENST00000487952 RPS10P46783 165 aaKnown RBP9.73□□□□□ -0.85
NUP188-207ENST00000487952 DAZ4Q86SG3 579 aaKnown RBP9.73□□□□□ -0.85
NUP188-207ENST00000487952 DAZ3Q9NR90 486 aaKnown RBP9.73□□□□□ -0.85
NUP188-207ENST00000487952 SDHAF1A6NFY7 115 aa9.72□□□□□ -0.85
NUP188-207ENST00000487952 PHOX2AO14813 284 aa9.72□□□□□ -0.85
NUP188-207ENST00000487952 TNFRSF6BO95407 300 aa9.72□□□□□ -0.85
NUP188-207ENST00000487952 ESRGQ1W209 222 aa9.72□□□□□ -0.85
NUP188-207ENST00000487952 KIAA1644Q3SXP7 199 aa9.72□□□□□ -0.85
NUP188-207ENST00000487952 TMEM97Q5BJF2 176 aa9.72□□□□□ -0.85
NUP188-207ENST00000487952 LYPD5Q6UWN5 251 aa9.72□□□□□ -0.85
NUP188-207ENST00000487952 NRACQ8N912 160 aa9.72□□□□□ -0.85
NUP188-207ENST00000487952 LAMTOR2Q9Y2Q5 125 aa9.72□□□□□ -0.85
NUP188-207ENST00000487952 NPYP01303 97 aa9.71□□□□□ -0.86
NUP188-207ENST00000487952 PMCHP20382 165 aa9.71□□□□□ -0.86
NUP188-207ENST00000487952 TIRAPP58753 221 aa9.71□□□□□ -0.86
NUP188-207ENST00000487952 SUMO2P61956 95 aaKnown RBP9.71□□□□□ -0.86
NUP188-207ENST00000487952 COTL1Q14019 142 aa9.71□□□□□ -0.86
NUP188-207ENST00000487952 C20orf78Q9BR46 151 aa9.71□□□□□ -0.86
NUP188-207ENST00000487952 LY6G6CO95867 125 aa9.7□□□□□ -0.86
NUP188-207ENST00000487952 LGALS9CQ6DKI2 356 aa9.7□□□□□ -0.86
NUP188-207ENST00000487952 TMEM70Q9BUB7 260 aa9.7□□□□□ -0.86
NUP188-207ENST00000487952 MAP1LC3AQ9H492 121 aa9.7□□□□□ -0.86
NUP188-207ENST00000487952 MRPS16Q9Y3D3 137 aaKnown RBP9.7□□□□□ -0.86
NUP188-207ENST00000487952 LINC00588Q9Y4M8 146 aa9.7□□□□□ -0.86
NUP188-207ENST00000487952 TRAV8-6A0A0B4J262 113 aa9.69□□□□□ -0.86
NUP188-207ENST00000487952 I3L3M4 83 aa9.69□□□□□ -0.86
NUP188-207ENST00000487952 VCYO14598 125 aa9.69□□□□□ -0.86
NUP188-207ENST00000487952 LELP1Q5T871 98 aa9.69□□□□□ -0.86
NUP188-207ENST00000487952 STARD9Q9P2P6 4700 aa9.68□□□□□ -0.86
NUP188-207ENST00000487952 COLCA2A8K830 154 aa9.68□□□□□ -0.86
NUP188-207ENST00000487952 RAB5AP20339 215 aa9.68□□□□□ -0.86
NUP188-207ENST00000487952 POLR2KP53803 58 aaKnown RBP9.68□□□□□ -0.86
NUP188-207ENST00000487952 LINC00476Q8WZB0 136 aa9.68□□□□□ -0.86
NUP188-207ENST00000487952 KIR2DL4Q99706 377 aa9.68□□□□□ -0.86
NUP188-207ENST00000487952 SMIM2Q9BVW6 85 aa9.68□□□□□ -0.86
NUP188-207ENST00000487952 CSMD3Q7Z407 3707 aa9.68□□□□□ -0.86
NUP188-207ENST00000487952 TRBV25-1A0A075B6N4 114 aa9.67□□□□□ -0.86
NUP188-207ENST00000487952 TRBV6-8A0A0A6YYG3 113 aa9.67□□□□□ -0.86
NUP188-207ENST00000487952 IGHV1-24A0A0C4DH33 117 aa9.67□□□□□ -0.86
NUP188-207ENST00000487952 LOC389332A0A1B0GUA5 103 aa9.67□□□□□ -0.86
NUP188-207ENST00000487952 FCER1GP30273 86 aa9.67□□□□□ -0.86
NUP188-207ENST00000487952 AMTP48728 403 aa9.67□□□□□ -0.86
NUP188-207ENST00000487952 RPL32P62910 135 aaKnown RBP9.67□□□□□ -0.86
NUP188-207ENST00000487952 TENM2Q9NT68 2774 aa9.67□□□□□ -0.86
NUP188-207ENST00000487952 TRBV27A0A0K0K1C4 114 aa9.66□□□□□ -0.86
NUP188-207ENST00000487952 TCAPO15273 167 aa9.66□□□□□ -0.86
NUP188-207ENST00000487952 DEFB104AQ8WTQ1 72 aa9.66□□□□□ -0.86
NUP188-207ENST00000487952 ALKBH7Q9BT30 221 aaPredicted RBP9.66□□□□□ -0.86
NUP188-207ENST00000487952 UPK3BQ9BT76 320 aa9.66□□□□□ -0.86
NUP188-207ENST00000487952 DYNC2H1Q8NCM8 4307 aaKnown RBP9.65□□□□□ -0.86
NUP188-207ENST00000487952 NTM-AS1Q6ZSK4 140 aa9.65□□□□□ -0.86
NUP188-207ENST00000487952 CHCHD5Q9BSY4 110 aa9.65□□□□□ -0.86
NUP188-207ENST00000487952 TMEM243Q9BU79 118 aa9.65□□□□□ -0.86
NUP188-207ENST00000487952 UBE2L6O14933 153 aa9.64□□□□□ -0.87
NUP188-207ENST00000487952 SIVA1O15304 175 aa9.64□□□□□ -0.87
NUP188-207ENST00000487952 TRGC2P03986 189 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms