RNA–Protein interactions for RNA: ENST00000487689.1

UBR3-211, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 3

Gene UBR3, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-211ENST00000487689 RPL35P42766 123 aaKnown RBP1.91□□□□□ -2.1
UBR3-211ENST00000487689 DYNLT3P51808 116 aa1.91□□□□□ -2.1
UBR3-211ENST00000487689 NCS1P62166 190 aa1.91□□□□□ -2.1
UBR3-211ENST00000487689 HBBP68871 147 aa1.91□□□□□ -2.1
UBR3-211ENST00000487689 DNLZQ5SXM8 178 aa1.91□□□□□ -2.1
UBR3-211ENST00000487689 EIF5AL1Q6IS14 154 aaKnown RBP1.91□□□□□ -2.1
UBR3-211ENST00000487689 DPPA3Q6W0C5 159 aa1.91□□□□□ -2.1
UBR3-211ENST00000487689 C2orf91Q6ZV80 131 aa1.91□□□□□ -2.1
UBR3-211ENST00000487689 LINC00305Q7Z4B0 112 aa1.91□□□□□ -2.1
UBR3-211ENST00000487689 NDUFA11Q86Y39 141 aa1.91□□□□□ -2.1
UBR3-211ENST00000487689 ZNF695Q8IW36 515 aa1.91□□□□□ -2.1
UBR3-211ENST00000487689 MMGT1Q8N4V1 131 aa1.91□□□□□ -2.1
UBR3-211ENST00000487689 OR51A4Q8NGJ6 313 aa1.91□□□□□ -2.1
UBR3-211ENST00000487689 TMEM106AQ96A25 262 aa1.91□□□□□ -2.1
UBR3-211ENST00000487689 AP1S3Q96PC3 154 aa1.91□□□□□ -2.1
UBR3-211ENST00000487689 NABP2Q9BQ15 211 aa1.91□□□□□ -2.1
UBR3-211ENST00000487689 SMIM3Q9BZL3 60 aa1.91□□□□□ -2.1
UBR3-211ENST00000487689 BOKQ9UMX3 212 aaPredicted RBP1.91□□□□□ -2.1
UBR3-211ENST00000487689 TIMM9Q9Y5J7 89 aa1.91□□□□□ -2.1
UBR3-211ENST00000487689 DNAH8Q96JB1 4490 aa1.9□□□□□ -2.11
UBR3-211ENST00000487689 MEIKINA0A087WXM9 373 aa1.9□□□□□ -2.11
UBR3-211ENST00000487689 A0A1B0GW64 132 aa1.9□□□□□ -2.11
UBR3-211ENST00000487689 FAM25AB3EWG3 89 aa1.9□□□□□ -2.11
UBR3-211ENST00000487689 FAM25CB3EWG5 89 aa1.9□□□□□ -2.11
UBR3-211ENST00000487689 FAM25GB3EWG6 89 aa1.9□□□□□ -2.11
UBR3-211ENST00000487689 GGTLC3B5MD39 225 aa1.9□□□□□ -2.11
UBR3-211ENST00000487689 H3BMG7 143 aa1.9□□□□□ -2.11
UBR3-211ENST00000487689 K7ERU9 68 aa1.9□□□□□ -2.11
UBR3-211ENST00000487689 PSCAO43653 123 aa1.9□□□□□ -2.11
UBR3-211ENST00000487689 HIST1H2BKO60814 126 aa1.9□□□□□ -2.11
UBR3-211ENST00000487689 NAPSAO96009 420 aa1.9□□□□□ -2.11
UBR3-211ENST00000487689 IFNGP01579 166 aa1.9□□□□□ -2.11
UBR3-211ENST00000487689 IGKV1-16P04430 117 aa1.9□□□□□ -2.11
UBR3-211ENST00000487689 IFNA4P05014 189 aa1.9□□□□□ -2.11
UBR3-211ENST00000487689 HIST1H2BJP06899 126 aa1.9□□□□□ -2.11
UBR3-211ENST00000487689 PAEPP09466 180 aa1.9□□□□□ -2.11
UBR3-211ENST00000487689 FABP2P12104 132 aa1.9□□□□□ -2.11
UBR3-211ENST00000487689 RNASE4P34096 147 aaKnown RBP1.9□□□□□ -2.11
UBR3-211ENST00000487689 RPL22P35268 128 aaKnown RBP1.9□□□□□ -2.11
UBR3-211ENST00000487689 FUSP35637 526 aaKnown RBP eCLIP1.9□□□□□ -2.11
UBR3-211ENST00000487689 FXYD2P54710 66 aa1.9□□□□□ -2.11
UBR3-211ENST00000487689 TMBIM6P55061 237 aa1.9□□□□□ -2.11
UBR3-211ENST00000487689 RRAS2P62070 204 aaPredicted RBP1.9□□□□□ -2.11
UBR3-211ENST00000487689 KISS1Q15726 138 aa1.9□□□□□ -2.11
UBR3-211ENST00000487689 ZNF791Q3KP31 576 aaPredicted RBP1.9□□□□□ -2.11
UBR3-211ENST00000487689 PABPC1L2AQ5JQF8 200 aa1.9□□□□□ -2.11
UBR3-211ENST00000487689 Q5VSD8 79 aa1.9□□□□□ -2.11
UBR3-211ENST00000487689 AMMECR1LQ6DCA0 310 aa1.9□□□□□ -2.11
UBR3-211ENST00000487689 SCIMPQ6UWF3 145 aa1.9□□□□□ -2.11
UBR3-211ENST00000487689 LYZL1Q6UWQ5 148 aa1.9□□□□□ -2.11
UBR3-211ENST00000487689 Q8NAQ8 132 aa1.9□□□□□ -2.11
UBR3-211ENST00000487689 OR5D16Q8NGK9 328 aa1.9□□□□□ -2.11
UBR3-211ENST00000487689 PFN4Q8NHR9 129 aa1.9□□□□□ -2.11
UBR3-211ENST00000487689 MCEEQ96PE7 176 aa1.9□□□□□ -2.11
UBR3-211ENST00000487689 IMMP2LQ96T52 175 aa1.9□□□□□ -2.11
UBR3-211ENST00000487689 NPCDR1Q9BY65 106 aa1.9□□□□□ -2.11
UBR3-211ENST00000487689 NHP2Q9NX24 153 aaKnown RBP1.9□□□□□ -2.11
UBR3-211ENST00000487689 OR5AC2Q9NZP5 309 aa1.9□□□□□ -2.11
UBR3-211ENST00000487689 ERG28Q9UKR5 140 aa1.9□□□□□ -2.11
UBR3-211ENST00000487689 RNF11Q9Y3C5 154 aa1.9□□□□□ -2.11
UBR3-211ENST00000487689 RBM7Q9Y580 266 aaKnown RBP1.9□□□□□ -2.11
UBR3-211ENST00000487689 CHCHD2Q9Y6H1 151 aaPredicted RBP1.9□□□□□ -2.11
UBR3-211ENST00000487689 LPAP08519 4548 aa1.9□□□□□ -2.11
UBR3-211ENST00000487689 TRAV7A0A075B6U4 112 aa1.89□□□□□ -2.11
UBR3-211ENST00000487689 IGKV3D-11A0A0A0MRZ8 115 aa1.89□□□□□ -2.11
UBR3-211ENST00000487689 TRAV13-1A0A0B4J241 112 aa1.89□□□□□ -2.11
UBR3-211ENST00000487689 LOC107984640A0A0U1RRK4 108 aa1.89□□□□□ -2.11
UBR3-211ENST00000487689 H0YGG7 62 aa1.89□□□□□ -2.11
UBR3-211ENST00000487689 H3BT86 120 aa1.89□□□□□ -2.11
UBR3-211ENST00000487689 NDUFB3O43676 98 aa1.89□□□□□ -2.11
UBR3-211ENST00000487689 NCR2O95944 276 aa1.89□□□□□ -2.11
UBR3-211ENST00000487689 TSPAN19P0C672 248 aa1.89□□□□□ -2.11
UBR3-211ENST00000487689 ZNF728P0DKX0 622 aa1.89□□□□□ -2.11
UBR3-211ENST00000487689 RPL28P46779 137 aaKnown RBP1.89□□□□□ -2.11
UBR3-211ENST00000487689 RHOGP84095 191 aa1.89□□□□□ -2.11
UBR3-211ENST00000487689 EMX2Q04743 252 aa1.89□□□□□ -2.11
UBR3-211ENST00000487689 FAM229BQ4G0N7 80 aa1.89□□□□□ -2.11
UBR3-211ENST00000487689 TMEM244Q5VVB8 128 aa1.89□□□□□ -2.11
UBR3-211ENST00000487689 Q5XG85 94 aa1.89□□□□□ -2.11
UBR3-211ENST00000487689 C4orf22Q6V702 233 aa1.89□□□□□ -2.11
UBR3-211ENST00000487689 IDO2Q6ZQW0 420 aa1.89□□□□□ -2.11
UBR3-211ENST00000487689 HMGN2P46Q86SG4 172 aa1.89□□□□□ -2.11
UBR3-211ENST00000487689 NAT14Q8WUY8 206 aa1.89□□□□□ -2.11
UBR3-211ENST00000487689 ARL11Q969Q4 196 aa1.89□□□□□ -2.11
UBR3-211ENST00000487689 OR8B2Q96RD0 313 aa1.89□□□□□ -2.11
UBR3-211ENST00000487689 TP53RKQ96S44 253 aa1.89□□□□□ -2.11
UBR3-211ENST00000487689 HIGD2AQ9BW72 106 aa1.89□□□□□ -2.11
UBR3-211ENST00000487689 DUSP21Q9H596 190 aa1.89□□□□□ -2.11
UBR3-211ENST00000487689 BAIAP2Q9UQB8 552 aa1.89□□□□□ -2.11
UBR3-211ENST00000487689 TRBV27A0A0K0K1C4 114 aa1.88□□□□□ -2.11
UBR3-211ENST00000487689 ODAMA1E959 279 aa1.88□□□□□ -2.11
UBR3-211ENST00000487689 H7C2G1 150 aa1.88□□□□□ -2.11
UBR3-211ENST00000487689 GNRH2O43555 120 aa1.88□□□□□ -2.11
UBR3-211ENST00000487689 SYNGR2O43760 224 aa1.88□□□□□ -2.11
UBR3-211ENST00000487689 GPX1P07203 203 aa1.88□□□□□ -2.11
UBR3-211ENST00000487689 CXCL1P09341 107 aa1.88□□□□□ -2.11
UBR3-211ENST00000487689 METTL15P1P0C7V9 234 aa1.88□□□□□ -2.11
UBR3-211ENST00000487689 KDELR1P24390 212 aa1.88□□□□□ -2.11
UBR3-211ENST00000487689 EIF2B2P49770 351 aaKnown RBP1.88□□□□□ -2.11
UBR3-211ENST00000487689 RAB5CP51148 216 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms