RNA–Protein interactions for RNA: ENST00000487539.1

CNN3-206, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-206ENST00000487539 EIF5AP63241 154 aaKnown RBP2.33□□□□□ -2.04
CNN3-206ENST00000487539 MLLT11Q13015 90 aaPredicted RBP2.33□□□□□ -2.04
CNN3-206ENST00000487539 TRAM1Q15629 374 aa2.33□□□□□ -2.04
CNN3-206ENST00000487539 DNAL1Q4LDG9 190 aa2.33□□□□□ -2.04
CNN3-206ENST00000487539 C20orf203Q8NBC4 194 aa2.33□□□□□ -2.04
CNN3-206ENST00000487539 YIPF6Q96EC8 236 aa2.33□□□□□ -2.04
CNN3-206ENST00000487539 TVP23CQ96ET8 276 aa2.33□□□□□ -2.04
CNN3-206ENST00000487539 C9orf16Q9BUW7 83 aa2.33□□□□□ -2.04
CNN3-206ENST00000487539 KRTAP2-4Q9BYR9 128 aa2.33□□□□□ -2.04
CNN3-206ENST00000487539 SH3BGRL3Q9H299 93 aa2.33□□□□□ -2.04
CNN3-206ENST00000487539 COPZ2Q9P299 210 aa2.33□□□□□ -2.04
CNN3-206ENST00000487539 A0A0U1RRA0 63 aa2.32□□□□□ -2.04
CNN3-206ENST00000487539 WRBO00258 174 aa2.32□□□□□ -2.04
CNN3-206ENST00000487539 PTTG1O95997 202 aa2.32□□□□□ -2.04
CNN3-206ENST00000487539 BCL2P10415 239 aa2.32□□□□□ -2.04
CNN3-206ENST00000487539 RNASE3P12724 160 aaKnown RBP2.32□□□□□ -2.04
CNN3-206ENST00000487539 S100A7P31151 101 aa2.32□□□□□ -2.04
CNN3-206ENST00000487539 FGF8P55075 233 aaPredicted RBP2.32□□□□□ -2.04
CNN3-206ENST00000487539 RAB11AP62491 216 aa2.32□□□□□ -2.04
CNN3-206ENST00000487539 MXD1Q05195 221 aa2.32□□□□□ -2.04
CNN3-206ENST00000487539 SMCO1Q147U7 214 aa2.32□□□□□ -2.04
CNN3-206ENST00000487539 GUK1Q16774 197 aa2.32□□□□□ -2.04
CNN3-206ENST00000487539 GPX8Q8TED1 209 aa2.32□□□□□ -2.04
CNN3-206ENST00000487539 NAA60Q9H7X0 242 aa2.32□□□□□ -2.04
CNN3-206ENST00000487539 LINC00474Q9P2X8 69 aa2.32□□□□□ -2.04
CNN3-206ENST00000487539 COX7A2P2O60397 106 aa2.31□□□□□ -2.04
CNN3-206ENST00000487539 HIST1H1EP10412 219 aaKnown RBP2.31□□□□□ -2.04
CNN3-206ENST00000487539 SDC2P34741 201 aa2.31□□□□□ -2.04
CNN3-206ENST00000487539 PRSS3P35030 304 aa2.31□□□□□ -2.04
CNN3-206ENST00000487539 ZNF80P51504 273 aaPredicted RBP2.31□□□□□ -2.04
CNN3-206ENST00000487539 ATP5IP56385 69 aaPredicted RBP2.31□□□□□ -2.04
CNN3-206ENST00000487539 LGALSLQ3ZCW2 172 aaPredicted RBP2.31□□□□□ -2.04
CNN3-206ENST00000487539 PCOTHQ58A44 107 aa2.31□□□□□ -2.04
CNN3-206ENST00000487539 SPANXN5Q5MJ07 72 aa2.31□□□□□ -2.04
CNN3-206ENST00000487539 C10orf113Q5VZT2 155 aa2.31□□□□□ -2.04
CNN3-206ENST00000487539 ZFP2Q6ZN57 461 aa2.31□□□□□ -2.04
CNN3-206ENST00000487539 LINC00304Q8N9R0 145 aa2.31□□□□□ -2.04
CNN3-206ENST00000487539 ASB13Q8WXK3 278 aa2.31□□□□□ -2.04
CNN3-206ENST00000487539 MGST2Q99735 147 aa2.31□□□□□ -2.04
CNN3-206ENST00000487539 BCL7BQ9BQE9 202 aa2.31□□□□□ -2.04
CNN3-206ENST00000487539 SLC39A9Q9NUM3 307 aa2.31□□□□□ -2.04
CNN3-206ENST00000487539 TXNL4BQ9NX01 149 aaKnown RBP2.31□□□□□ -2.04
CNN3-206ENST00000487539 GVQW2A0A096LPI5 108 aaPredicted RBP2.3□□□□□ -2.04
CNN3-206ENST00000487539 A0A0A6YYH2 397 aa2.3□□□□□ -2.04
CNN3-206ENST00000487539 IGKV3OR2-268A0A0C4DH90 116 aa2.3□□□□□ -2.04
CNN3-206ENST00000487539 A6NJ64 397 aa2.3□□□□□ -2.04
CNN3-206ENST00000487539 MT2AP02795 61 aa2.3□□□□□ -2.04
CNN3-206ENST00000487539 CD3DP04234 171 aa2.3□□□□□ -2.04
CNN3-206ENST00000487539 RAB2AP61019 212 aa2.3□□□□□ -2.04
CNN3-206ENST00000487539 SELENOTP62341 195 aa2.3□□□□□ -2.04
CNN3-206ENST00000487539 MIC13Q5XKP0 118 aa2.3□□□□□ -2.04
CNN3-206ENST00000487539 SNX29P2Q8IUI4 249 aa2.3□□□□□ -2.04
CNN3-206ENST00000487539 C8orf59Q8N0T1 100 aaPredicted RBP2.3□□□□□ -2.04
CNN3-206ENST00000487539 COMMD3Q9UBI1 195 aa2.3□□□□□ -2.04
CNN3-206ENST00000487539 RAB26Q9ULW5 256 aa2.3□□□□□ -2.04
CNN3-206ENST00000487539 PRELID1Q9Y255 219 aa2.3□□□□□ -2.04
CNN3-206ENST00000487539 TIMM9Q9Y5J7 89 aa2.3□□□□□ -2.04
CNN3-206ENST00000487539 TRBV7-3A0A075B6L6 115 aa2.29□□□□□ -2.04
CNN3-206ENST00000487539 TRAV21A0A0B4J279 112 aa2.29□□□□□ -2.04
CNN3-206ENST00000487539 DUXBA0A1W2PPF3 345 aa2.29□□□□□ -2.04
CNN3-206ENST00000487539 RBAKDNA6NC62 111 aa2.29□□□□□ -2.04
CNN3-206ENST00000487539 K7EPK0 472 aa2.29□□□□□ -2.04
CNN3-206ENST00000487539 GOSR2O14653 212 aa2.29□□□□□ -2.04
CNN3-206ENST00000487539 MT1FP04733 61 aa2.29□□□□□ -2.04
CNN3-206ENST00000487539 RPL29P47914 159 aaKnown RBP2.29□□□□□ -2.04
CNN3-206ENST00000487539 SCGB2B2Q4G0G5 96 aa2.29□□□□□ -2.04
CNN3-206ENST00000487539 GCSAMLQ5JQS6 135 aa2.29□□□□□ -2.04
CNN3-206ENST00000487539 FAM74A4Q5TZK3 123 aa2.29□□□□□ -2.04
CNN3-206ENST00000487539 TERB2Q8NHR7 220 aa2.29□□□□□ -2.04
CNN3-206ENST00000487539 TSKUQ8WUA8 353 aa2.29□□□□□ -2.04
CNN3-206ENST00000487539 FAM104AQ969W3 186 aa2.29□□□□□ -2.04
CNN3-206ENST00000487539 PTH2Q96A98 100 aa2.29□□□□□ -2.04
CNN3-206ENST00000487539 DIRAS2Q96HU8 199 aa2.29□□□□□ -2.04
CNN3-206ENST00000487539 CARD19Q96LW7 228 aa2.29□□□□□ -2.04
CNN3-206ENST00000487539 NDUFB11Q9NX14 153 aa2.29□□□□□ -2.04
CNN3-206ENST00000487539 STRAPQ9Y3F4 350 aaKnown RBP2.29□□□□□ -2.04
CNN3-206ENST00000487539 TRAV8-4A0A0B4J246 113 aa2.28□□□□□ -2.04
CNN3-206ENST00000487539 LOC107984640A0A0U1RRK4 108 aa2.28□□□□□ -2.04
CNN3-206ENST00000487539 A8MWV9 139 aa2.28□□□□□ -2.04
CNN3-206ENST00000487539 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.28□□□□□ -2.04
CNN3-206ENST00000487539 SYNGR2O43760 224 aa2.28□□□□□ -2.04
CNN3-206ENST00000487539 P01737 135 aa2.28□□□□□ -2.04
CNN3-206ENST00000487539 AKR1C4P17516 323 aa2.28□□□□□ -2.04
CNN3-206ENST00000487539 TGFBR1P36897 503 aa2.28□□□□□ -2.04
CNN3-206ENST00000487539 MEF2BQ02080 365 aaPredicted RBP2.28□□□□□ -2.04
CNN3-206ENST00000487539 OR51S1Q8NGJ8 323 aa2.28□□□□□ -2.04
CNN3-206ENST00000487539 ZFAND1Q8TCF1 268 aa2.28□□□□□ -2.04
CNN3-206ENST00000487539 S100A16Q96FQ6 103 aaKnown RBP2.28□□□□□ -2.04
CNN3-206ENST00000487539 FAM167A-AS1Q96KT0 104 aa2.28□□□□□ -2.04
CNN3-206ENST00000487539 ATP5SQ99766 215 aa2.28□□□□□ -2.04
CNN3-206ENST00000487539 SLC25A2Q9BXI2 301 aa2.28□□□□□ -2.04
CNN3-206ENST00000487539 WFDC1Q9HC57 220 aa2.28□□□□□ -2.04
CNN3-206ENST00000487539 NPVFQ9HCQ7 196 aa2.28□□□□□ -2.04
CNN3-206ENST00000487539 CCDC59Q9P031 241 aaKnown RBP2.28□□□□□ -2.04
CNN3-206ENST00000487539 A0A0B4J2A0 478 aa2.27□□□□□ -2.05
CNN3-206ENST00000487539 METTL15P1P0C7V9 234 aa2.27□□□□□ -2.05
CNN3-206ENST00000487539 GZMBP10144 247 aa2.27□□□□□ -2.05
CNN3-206ENST00000487539 SYCNQ0VAF6 134 aa2.27□□□□□ -2.05
CNN3-206ENST00000487539 COX6B2Q6YFQ2 88 aa2.27□□□□□ -2.05
CNN3-206ENST00000487539 FAM19A5Q7Z5A7 132 aaPredicted RBP2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms