RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 C20orf203Q8NBC4 194 aa9.61□□□□□ -0.87
MCF2L-228ENST00000487354 ACTR3CQ9C0K3 210 aaPredicted RBP9.61□□□□□ -0.87
MCF2L-228ENST00000487354 TRBV6-1A0A0K0K1D8 114 aa9.6□□□□□ -0.87
MCF2L-228ENST00000487354 SSNA1O43805 119 aa9.6□□□□□ -0.87
MCF2L-228ENST00000487354 UPK1BO75841 260 aa9.6□□□□□ -0.87
MCF2L-228ENST00000487354 LTAP01374 205 aa9.6□□□□□ -0.87
MCF2L-228ENST00000487354 MBP02144 154 aa9.6□□□□□ -0.87
MCF2L-228ENST00000487354 IQCJQ1A5X6 159 aa9.6□□□□□ -0.87
MCF2L-228ENST00000487354 WDR73Q6P4I2 378 aa9.6□□□□□ -0.87
MCF2L-228ENST00000487354 HIST1H2BAQ96A08 127 aa9.6□□□□□ -0.87
MCF2L-228ENST00000487354 TNFSF18Q9UNG2 199 aa9.6□□□□□ -0.87
MCF2L-228ENST00000487354 ZFP30Q9Y2G7 519 aa9.6□□□□□ -0.87
MCF2L-228ENST00000487354 C15orf56Q8N910 161 aa9.59□□□□□ -0.87
MCF2L-228ENST00000487354 DERL1Q9BUN8 251 aa9.59□□□□□ -0.87
MCF2L-228ENST00000487354 IGLV4-60A0A075B6I1 120 aa9.58□□□□□ -0.88
MCF2L-228ENST00000487354 C7orf33Q8WU49 177 aa9.58□□□□□ -0.88
MCF2L-228ENST00000487354 FMC1Q96HJ9 113 aa9.58□□□□□ -0.88
MCF2L-228ENST00000487354 AQP10Q96PS8 301 aa9.58□□□□□ -0.88
MCF2L-228ENST00000487354 SSBP4Q9BWG4 385 aaPredicted RBP9.58□□□□□ -0.88
MCF2L-228ENST00000487354 TRBV25-1A0A075B6N4 114 aa9.57□□□□□ -0.88
MCF2L-228ENST00000487354 SNAI2O43623 268 aa9.57□□□□□ -0.88
MCF2L-228ENST00000487354 COX6A2Q02221 97 aa9.57□□□□□ -0.88
MCF2L-228ENST00000487354 TMEM97Q5BJF2 176 aa9.57□□□□□ -0.88
MCF2L-228ENST00000487354 LINC00299Q6ZSB3 139 aa9.57□□□□□ -0.88
MCF2L-228ENST00000487354 INO80EQ8NBZ0 244 aaPredicted RBP9.57□□□□□ -0.88
MCF2L-228ENST00000487354 DPH3Q96FX2 82 aa9.57□□□□□ -0.88
MCF2L-228ENST00000487354 DPH3P1Q9H4G8 78 aa9.57□□□□□ -0.88
MCF2L-228ENST00000487354 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.56□□□□□ -0.88
MCF2L-228ENST00000487354 MUC21A0A140T8X8 626 aa9.56□□□□□ -0.88
MCF2L-228ENST00000487354 CTXND1A0A1B0GTU2 59 aa9.56□□□□□ -0.88
MCF2L-228ENST00000487354 CXCL1P09341 107 aa9.56□□□□□ -0.88
MCF2L-228ENST00000487354 PRSS3P2Q8NHM4 247 aa9.56□□□□□ -0.88
MCF2L-228ENST00000487354 TRAV8-4A0A0B4J246 113 aa9.55□□□□□ -0.88
MCF2L-228ENST00000487354 P01737 135 aa9.55□□□□□ -0.88
MCF2L-228ENST00000487354 DEFA3P59666 94 aa9.55□□□□□ -0.88
MCF2L-228ENST00000487354 S100ZQ8WXG8 99 aa9.55□□□□□ -0.88
MCF2L-228ENST00000487354 AP5S1Q9NUS5 200 aa9.55□□□□□ -0.88
MCF2L-228ENST00000487354 IGHV1-24A0A0C4DH33 117 aa9.54□□□□□ -0.88
MCF2L-228ENST00000487354 RAB5CP51148 216 aa9.54□□□□□ -0.88
MCF2L-228ENST00000487354 UBE2G1P62253 170 aa9.54□□□□□ -0.88
MCF2L-228ENST00000487354 SRSF9Q13242 221 aaKnown RBP eCLIP9.54□□□□□ -0.88
MCF2L-228ENST00000487354 RPL7L1Q6DKI1 246 aaKnown RBP9.54□□□□□ -0.88
MCF2L-228ENST00000487354 GTSF1Q8WW33 167 aa9.54□□□□□ -0.88
MCF2L-228ENST00000487354 ZNF471Q9BX82 626 aaPredicted RBP9.54□□□□□ -0.88
MCF2L-228ENST00000487354 NKX6-2Q9C056 277 aaPredicted RBP9.54□□□□□ -0.88
MCF2L-228ENST00000487354 MUC2Q02817 5179 aa9.54□□□□□ -0.88
MCF2L-228ENST00000487354 IGKV2-24A0A0C4DH68 120 aa9.53□□□□□ -0.88
MCF2L-228ENST00000487354 A0A1B0GUV1 79 aa9.53□□□□□ -0.88
MCF2L-228ENST00000487354 F5H697 171 aa9.53□□□□□ -0.88
MCF2L-228ENST00000487354 OR5AL1P0C617 328 aa9.53□□□□□ -0.88
MCF2L-228ENST00000487354 MAJINQ3KP22 176 aa9.53□□□□□ -0.88
MCF2L-228ENST00000487354 Q5BKY6 102 aa9.53□□□□□ -0.88
MCF2L-228ENST00000487354 SPINK6Q6UWN8 80 aa9.53□□□□□ -0.88
MCF2L-228ENST00000487354 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.53□□□□□ -0.88
MCF2L-228ENST00000487354 M0QY20 66 aa9.52□□□□□ -0.89
MCF2L-228ENST00000487354 NDUFS6O75380 124 aaKnown RBP9.52□□□□□ -0.89
MCF2L-228ENST00000487354 STPG4Q8N801 248 aa9.52□□□□□ -0.89
MCF2L-228ENST00000487354 MLST8Q9BVC4 326 aa9.52□□□□□ -0.89
MCF2L-228ENST00000487354 A0A096LNI7 61 aa9.51□□□□□ -0.89
MCF2L-228ENST00000487354 GZMBP10144 247 aa9.51□□□□□ -0.89
MCF2L-228ENST00000487354 LYPD6BQ8NI32 183 aa9.51□□□□□ -0.89
MCF2L-228ENST00000487354 NDUFA13Q9P0J0 144 aa9.51□□□□□ -0.89
MCF2L-228ENST00000487354 RPS10P46783 165 aaKnown RBP9.5□□□□□ -0.89
MCF2L-228ENST00000487354 FHITP49789 147 aa9.5□□□□□ -0.89
MCF2L-228ENST00000487354 HIGD2BQ4VC39 106 aa9.5□□□□□ -0.89
MCF2L-228ENST00000487354 SPANXN1Q5VSR9 72 aa9.5□□□□□ -0.89
MCF2L-228ENST00000487354 TCEAL7Q9BRU2 100 aa9.5□□□□□ -0.89
MCF2L-228ENST00000487354 MAP1LC3B2A6NCE7 125 aa9.49□□□□□ -0.89
MCF2L-228ENST00000487354 GAGE12HA6NDE8 117 aa9.49□□□□□ -0.89
MCF2L-228ENST00000487354 AKR1C3P42330 323 aa9.49□□□□□ -0.89
MCF2L-228ENST00000487354 SSTP61278 116 aa9.49□□□□□ -0.89
MCF2L-228ENST00000487354 SUMO4Q6EEV6 95 aa9.49□□□□□ -0.89
MCF2L-228ENST00000487354 REG3GQ6UW15 175 aa9.49□□□□□ -0.89
MCF2L-228ENST00000487354 AP1S3Q96PC3 154 aa9.49□□□□□ -0.89
MCF2L-228ENST00000487354 TMEM243Q9BU79 118 aa9.49□□□□□ -0.89
MCF2L-228ENST00000487354 MAP1LC3BQ9GZQ8 125 aa9.49□□□□□ -0.89
MCF2L-228ENST00000487354 GVQW2A0A096LPI5 108 aaPredicted RBP9.48□□□□□ -0.89
MCF2L-228ENST00000487354 ALG5Q9Y673 324 aa9.48□□□□□ -0.89
MCF2L-228ENST00000487354 NKX2-5P52952 324 aaPredicted RBP9.47□□□□□ -0.89
MCF2L-228ENST00000487354 PGLYRP4Q96LB8 373 aa9.47□□□□□ -0.89
MCF2L-228ENST00000487354 KRTAP9-2Q9BYQ4 174 aa9.47□□□□□ -0.89
MCF2L-228ENST00000487354 SCO2A0A1W2PP80 73 aa9.46□□□□□ -0.9
MCF2L-228ENST00000487354 A6NHS1 94 aa9.46□□□□□ -0.9
MCF2L-228ENST00000487354 CST9LP1Q5W188 147 aa9.46□□□□□ -0.9
MCF2L-228ENST00000487354 MGPP08493 103 aa9.45□□□□□ -0.9
MCF2L-228ENST00000487354 IGLC6P0CF74 106 aa9.45□□□□□ -0.9
MCF2L-228ENST00000487354 SMIM17P0DL12 118 aa9.45□□□□□ -0.9
MCF2L-228ENST00000487354 PAGE4O60829 102 aa9.44□□□□□ -0.9
MCF2L-228ENST00000487354 SULT1A2P50226 295 aa9.44□□□□□ -0.9
MCF2L-228ENST00000487354 AKR1C8PQ5T2L2 129 aa9.44□□□□□ -0.9
MCF2L-228ENST00000487354 STOML3Q8TAV4 291 aa9.44□□□□□ -0.9
MCF2L-228ENST00000487354 BORCS7-ASMTA0A0B4J1R7 106 aa9.43□□□□□ -0.9
MCF2L-228ENST00000487354 CFAP161Q6P656 301 aa9.43□□□□□ -0.9
MCF2L-228ENST00000487354 Q6ZRP5 223 aa9.43□□□□□ -0.9
MCF2L-228ENST00000487354 BAGE2Q86Y30 109 aa9.43□□□□□ -0.9
MCF2L-228ENST00000487354 CHCHD10Q8WYQ3 142 aaPredicted RBP9.43□□□□□ -0.9
MCF2L-228ENST00000487354 CYTL1Q9NRR1 136 aa9.43□□□□□ -0.9
MCF2L-228ENST00000487354 G3V3Q6 166 aa9.42□□□□□ -0.9
MCF2L-228ENST00000487354 H7C1H1 209 aa9.42□□□□□ -0.9
MCF2L-228ENST00000487354 FOXI1Q12951 378 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms