RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 HLA-DMBP28068 263 aa1.56□□□□□ -2.16
SNRNP27-204ENST00000487029 GCHFRP30047 84 aa1.56□□□□□ -2.16
SNRNP27-204ENST00000487029 FXYD4P59646 89 aa1.56□□□□□ -2.16
SNRNP27-204ENST00000487029 BSPH1Q075Z2 132 aa1.56□□□□□ -2.16
SNRNP27-204ENST00000487029 NUMA1Q14980 2115 aa1.56□□□□□ -2.16
SNRNP27-204ENST00000487029 ZNF56Q15929 161 aa1.56□□□□□ -2.16
SNRNP27-204ENST00000487029 C12orf74Q32Q52 190 aa1.56□□□□□ -2.16
SNRNP27-204ENST00000487029 KRTAP6-3Q3LI67 103 aa1.56□□□□□ -2.16
SNRNP27-204ENST00000487029 SPANXN5Q5MJ07 72 aa1.56□□□□□ -2.16
SNRNP27-204ENST00000487029 S100A7L2Q5SY68 101 aa1.56□□□□□ -2.16
SNRNP27-204ENST00000487029 FAM201AQ5SY85 155 aa1.56□□□□□ -2.16
SNRNP27-204ENST00000487029 CFAP126Q5VTH2 177 aa1.56□□□□□ -2.16
SNRNP27-204ENST00000487029 C2orf91Q6ZV80 131 aa1.56□□□□□ -2.16
SNRNP27-204ENST00000487029 LINC00643Q86TS7 51 aa1.56□□□□□ -2.16
SNRNP27-204ENST00000487029 IFI27L1Q96BM0 104 aa1.56□□□□□ -2.16
SNRNP27-204ENST00000487029 BORCS8Q96FH0 119 aa1.56□□□□□ -2.16
SNRNP27-204ENST00000487029 ARHGAP5-AS1Q96IT6 56 aa1.56□□□□□ -2.16
SNRNP27-204ENST00000487029 AGPAT4-IT1Q9H0P7 198 aa1.56□□□□□ -2.16
SNRNP27-204ENST00000487029 LINC00527Q9UJ94 153 aa1.56□□□□□ -2.16
SNRNP27-204ENST00000487029 PKIGQ9Y2B9 76 aa1.56□□□□□ -2.16
SNRNP27-204ENST00000487029 AMMECR1Q9Y4X0 333 aaPredicted RBP1.56□□□□□ -2.16
SNRNP27-204ENST00000487029 SERP1Q9Y6X1 66 aa1.56□□□□□ -2.16
SNRNP27-204ENST00000487029 OBSL1O75147 1896 aa1.56□□□□□ -2.16
SNRNP27-204ENST00000487029 UBR3Q6ZT12 1888 aa1.56□□□□□ -2.16
SNRNP27-204ENST00000487029 PLXNA1Q9UIW2 1896 aa1.56□□□□□ -2.16
SNRNP27-204ENST00000487029 PLXNB1O43157 2135 aa1.55□□□□□ -2.16
SNRNP27-204ENST00000487029 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.55□□□□□ -2.16
SNRNP27-204ENST00000487029 A0A0J9YW62 118 aa1.55□□□□□ -2.16
SNRNP27-204ENST00000487029 CXorf51AA0A1B0GTR3 108 aa1.55□□□□□ -2.16
SNRNP27-204ENST00000487029 FAM236AA0A1B0GUQ0 79 aa1.55□□□□□ -2.16
SNRNP27-204ENST00000487029 FAM236BA0A1B0GV22 79 aa1.55□□□□□ -2.16
SNRNP27-204ENST00000487029 TCRBV4S1A1TA0A5B7 111 aa1.55□□□□□ -2.16
SNRNP27-204ENST00000487029 C17orf98A8MV24 154 aa1.55□□□□□ -2.16
SNRNP27-204ENST00000487029 F2Z2F3 143 aa1.55□□□□□ -2.16
SNRNP27-204ENST00000487029 H3BT86 120 aa1.55□□□□□ -2.16
SNRNP27-204ENST00000487029 NDUFB3O43676 98 aa1.55□□□□□ -2.16
SNRNP27-204ENST00000487029 NDUFC1O43677 76 aa1.55□□□□□ -2.16
SNRNP27-204ENST00000487029 SPINK4O60575 86 aa1.55□□□□□ -2.16
SNRNP27-204ENST00000487029 PPYP01298 95 aa1.55□□□□□ -2.16
SNRNP27-204ENST00000487029 CD7P09564 240 aa1.55□□□□□ -2.16
SNRNP27-204ENST00000487029 PIRTP0C851 137 aa1.55□□□□□ -2.16
SNRNP27-204ENST00000487029 HMGA1P17096 107 aaKnown RBP1.55□□□□□ -2.16
SNRNP27-204ENST00000487029 PSMB8P28062 276 aa1.55□□□□□ -2.16
SNRNP27-204ENST00000487029 CCL8P80075 99 aa1.55□□□□□ -2.16
SNRNP27-204ENST00000487029 PMAIP1Q13794 54 aa1.55□□□□□ -2.16
SNRNP27-204ENST00000487029 DIAPH2-AS1Q14236 149 aa1.55□□□□□ -2.16
SNRNP27-204ENST00000487029 TMEM155Q4W5P6 130 aa1.55□□□□□ -2.16
SNRNP27-204ENST00000487029 SPRNQ5BIV9 151 aa1.55□□□□□ -2.16
SNRNP27-204ENST00000487029 SLC48A1Q6P1K1 146 aa1.55□□□□□ -2.16
SNRNP27-204ENST00000487029 HRCT1Q6UXD1 115 aa1.55□□□□□ -2.16
SNRNP27-204ENST00000487029 AAED1Q7RTV5 226 aa1.55□□□□□ -2.16
SNRNP27-204ENST00000487029 RPS19BP1Q86WX3 136 aaKnown RBP1.55□□□□□ -2.16
SNRNP27-204ENST00000487029 TMEM75Q8N9X5 138 aa1.55□□□□□ -2.16
SNRNP27-204ENST00000487029 PFN4Q8NHR9 129 aa1.55□□□□□ -2.16
SNRNP27-204ENST00000487029 MYOZ3Q8TDC0 251 aa1.55□□□□□ -2.16
SNRNP27-204ENST00000487029 DPH3Q96FX2 82 aa1.55□□□□□ -2.16
SNRNP27-204ENST00000487029 AMELYQ99218 206 aa1.55□□□□□ -2.16
SNRNP27-204ENST00000487029 TRGV9Q99603 122 aa1.55□□□□□ -2.16
SNRNP27-204ENST00000487029 NAA38Q9BRA0 125 aaKnown RBP1.55□□□□□ -2.16
SNRNP27-204ENST00000487029 RTL8AQ9BWD3 113 aa1.55□□□□□ -2.16
SNRNP27-204ENST00000487029 CXCL16Q9H2A7 254 aa1.55□□□□□ -2.16
SNRNP27-204ENST00000487029 TIMM8BQ9Y5J9 83 aaPredicted RBP1.55□□□□□ -2.16
SNRNP27-204ENST00000487029 V9GYV3 84 aa1.55□□□□□ -2.16
SNRNP27-204ENST00000487029 FCGBPQ9Y6R7 5405 aaPredicted RBP1.55□□□□□ -2.16
SNRNP27-204ENST00000487029 COL5A3P25940 1745 aaPredicted RBP1.54□□□□□ -2.16
SNRNP27-204ENST00000487029 NLRC5Q86WI3 1866 aa1.54□□□□□ -2.16
SNRNP27-204ENST00000487029 CPAMD8Q8IZJ3 1885 aa1.54□□□□□ -2.16
SNRNP27-204ENST00000487029 EXPH5Q8NEV8 1989 aa1.54□□□□□ -2.16
SNRNP27-204ENST00000487029 DOCK3Q8IZD9 2030 aa1.54□□□□□ -2.16
SNRNP27-204ENST00000487029 TRAV4A0A0B4J268 109 aa1.54□□□□□ -2.16
SNRNP27-204ENST00000487029 TRAV17A0A0B4J275 112 aa1.54□□□□□ -2.16
SNRNP27-204ENST00000487029 TRBV10-2A0A0K0K1G8 114 aa1.54□□□□□ -2.16
SNRNP27-204ENST00000487029 LOC107984640A0A0U1RRK4 108 aa1.54□□□□□ -2.16
SNRNP27-204ENST00000487029 FAM236DA0A1B0GTK5 79 aa1.54□□□□□ -2.16
SNRNP27-204ENST00000487029 J3QQQ9 107 aa1.54□□□□□ -2.16
SNRNP27-204ENST00000487029 BCE1O60756 84 aa1.54□□□□□ -2.16
SNRNP27-204ENST00000487029 ARL14EPLP0DKL9 152 aa1.54□□□□□ -2.16
SNRNP27-204ENST00000487029 P0DMU3 169 aa1.54□□□□□ -2.16
SNRNP27-204ENST00000487029 FAM231AP0DMU4 169 aa1.54□□□□□ -2.16
SNRNP27-204ENST00000487029 FAM231CP0DMU5 169 aa1.54□□□□□ -2.16
SNRNP27-204ENST00000487029 FAM236CP0DP71 79 aa1.54□□□□□ -2.16
SNRNP27-204ENST00000487029 IAPPP10997 89 aa1.54□□□□□ -2.16
SNRNP27-204ENST00000487029 IL9P15248 144 aa1.54□□□□□ -2.16
SNRNP27-204ENST00000487029 FOXA3P55318 350 aaPredicted RBP1.54□□□□□ -2.16
SNRNP27-204ENST00000487029 FKBP1AP62942 108 aaKnown RBP1.54□□□□□ -2.16
SNRNP27-204ENST00000487029 QRFPP83859 136 aa1.54□□□□□ -2.16
SNRNP27-204ENST00000487029 RPL18Q07020 188 aaKnown RBP1.54□□□□□ -2.16
SNRNP27-204ENST00000487029 PLGLAQ15195 96 aa1.54□□□□□ -2.16
SNRNP27-204ENST00000487029 C4orf26Q17RF5 130 aa1.54□□□□□ -2.16
SNRNP27-204ENST00000487029 LINC01590Q5TEZ4 76 aa1.54□□□□□ -2.16
SNRNP27-204ENST00000487029 FKBP1CQ5VVH2 108 aa1.54□□□□□ -2.16
SNRNP27-204ENST00000487029 C22orf39Q6P5X5 142 aa1.54□□□□□ -2.16
SNRNP27-204ENST00000487029 TMEM14EPQ6UXP3 125 aa1.54□□□□□ -2.16
SNRNP27-204ENST00000487029 SCGB1D4Q6XE38 83 aa1.54□□□□□ -2.16
SNRNP27-204ENST00000487029 SDIM1Q6ZPB5 146 aa1.54□□□□□ -2.16
SNRNP27-204ENST00000487029 LINC00305Q7Z4B0 112 aa1.54□□□□□ -2.16
SNRNP27-204ENST00000487029 SBSPONQ8IVN8 264 aa1.54□□□□□ -2.16
SNRNP27-204ENST00000487029 RPP25LQ8N5L8 163 aaKnown RBP1.54□□□□□ -2.16
SNRNP27-204ENST00000487029 TMEM86BQ8N661 226 aa1.54□□□□□ -2.16
SNRNP27-204ENST00000487029 BRK1Q8WUW1 75 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms