RNA–Protein interactions for RNA: ENST00000486148.1

TNXB-205, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-205ENST00000486148 C11orf86A6NJI1 115 aa13.01□□□□□ -0.33
TNXB-205ENST00000486148 PLEKHB2Q96CS7 222 aa13.01□□□□□ -0.33
TNXB-205ENST00000486148 ANKRD29Q8N6D5 301 aa13□□□□□ -0.33
TNXB-205ENST00000486148 MAPK1IP1LQ8NDC0 245 aa13□□□□□ -0.33
TNXB-205ENST00000486148 ZNF815PA8K554 130 aa13□□□□□ -0.33
TNXB-205ENST00000486148 K7EQG2 157 aa13□□□□□ -0.33
TNXB-205ENST00000486148 VCYO14598 125 aa13□□□□□ -0.33
TNXB-205ENST00000486148 TGFAP01135 160 aa13□□□□□ -0.33
TNXB-205ENST00000486148 COX6B1P14854 86 aa13□□□□□ -0.33
TNXB-205ENST00000486148 SYNJ2BPP57105 145 aa13□□□□□ -0.33
TNXB-205ENST00000486148 SBSPONQ8IVN8 264 aa13□□□□□ -0.33
TNXB-205ENST00000486148 FAM110AQ9BQ89 295 aa13□□□□□ -0.33
TNXB-205ENST00000486148 CCDC179H3BU77 68 aa12.99□□□□□ -0.33
TNXB-205ENST00000486148 LGALS9O00182 355 aa12.99□□□□□ -0.33
TNXB-205ENST00000486148 SPINK13Q1W4C9 94 aa12.99□□□□□ -0.33
TNXB-205ENST00000486148 Q8N1Y9 231 aa12.99□□□□□ -0.33
TNXB-205ENST00000486148 KLHL30-AS1Q8NEE0 82 aa12.99□□□□□ -0.33
TNXB-205ENST00000486148 DUX5Q96PT3 197 aa12.99□□□□□ -0.33
TNXB-205ENST00000486148 SNRPD3P62318 126 aaKnown RBP12.99□□□□□ -0.33
TNXB-205ENST00000486148 ODF3Q96PU9 254 aa12.99□□□□□ -0.33
TNXB-205ENST00000486148 DOPEY2Q9Y3R5 2298 aa12.99□□□□□ -0.33
TNXB-205ENST00000486148 LINC01356Q8N9X3 169 aa12.98□□□□□ -0.33
TNXB-205ENST00000486148 ZANQ9Y493 2812 aa12.98□□□□□ -0.33
TNXB-205ENST00000486148 SMIM20Q8N5G0 67 aa12.98□□□□□ -0.33
TNXB-205ENST00000486148 TRBV20-1A0A075B6N2 111 aa12.97□□□□□ -0.33
TNXB-205ENST00000486148 TRBV27A0A0K0K1C4 114 aa12.97□□□□□ -0.33
TNXB-205ENST00000486148 RHODO00212 210 aa12.97□□□□□ -0.33
TNXB-205ENST00000486148 PMVKQ15126 192 aa12.97□□□□□ -0.33
TNXB-205ENST00000486148 VCX2Q9H322 139 aa12.97□□□□□ -0.33
TNXB-205ENST00000486148 ZNF256Q9Y2P7 627 aaPredicted RBP12.97□□□□□ -0.33
TNXB-205ENST00000486148 A8MWV9 139 aa12.97□□□□□ -0.33
TNXB-205ENST00000486148 DSCR9P59020 149 aa12.97□□□□□ -0.33
TNXB-205ENST00000486148 SORL1Q92673 2214 aa12.97□□□□□ -0.33
TNXB-205ENST00000486148 A0A096LNT2 108 aa12.96□□□□□ -0.33
TNXB-205ENST00000486148 TRBV6-5A0A0K0K1A5 114 aa12.96□□□□□ -0.33
TNXB-205ENST00000486148 NDUFV3P56181 108 aaKnown RBP12.96□□□□□ -0.33
TNXB-205ENST00000486148 ZNF56Q15929 161 aa12.96□□□□□ -0.33
TNXB-205ENST00000486148 SCGB1D4Q6XE38 83 aa12.96□□□□□ -0.33
TNXB-205ENST00000486148 USP9YO00507 2555 aaPredicted RBP12.96□□□□□ -0.33
TNXB-205ENST00000486148 TMEM89A2RUT3 159 aa12.96□□□□□ -0.33
TNXB-205ENST00000486148 M0QY20 66 aa12.96□□□□□ -0.33
TNXB-205ENST00000486148 TMEM141Q96I45 108 aa12.96□□□□□ -0.33
TNXB-205ENST00000486148 IGHV1OR15-1A0A075B7D0 117 aa12.96□□□□□ -0.34
TNXB-205ENST00000486148 CRLF1O75462 422 aa12.96□□□□□ -0.34
TNXB-205ENST00000486148 TIMM17AQ99595 171 aa12.96□□□□□ -0.34
TNXB-205ENST00000486148 TRAV4A0A0B4J268 109 aa12.95□□□□□ -0.34
TNXB-205ENST00000486148 NDUFA11Q86Y39 141 aa12.95□□□□□ -0.34
TNXB-205ENST00000486148 SRSF9Q13242 221 aaKnown RBP eCLIP12.95□□□□□ -0.34
TNXB-205ENST00000486148 ZNRF2Q8NHG8 242 aa12.95□□□□□ -0.34
TNXB-205ENST00000486148 CACNA1AO00555 2505 aa12.94□□□□□ -0.34
TNXB-205ENST00000486148 GAGE12JA6NER3 117 aa12.94□□□□□ -0.34
TNXB-205ENST00000486148 TMEM262E9PQX1 116 aa12.94□□□□□ -0.34
TNXB-205ENST00000486148 GAGE7O76087 117 aa12.94□□□□□ -0.34
TNXB-205ENST00000486148 GAGE12FP0CL80 117 aa12.94□□□□□ -0.34
TNXB-205ENST00000486148 GAGE12GP0CL81 117 aa12.94□□□□□ -0.34
TNXB-205ENST00000486148 GAGE12IP0CL82 117 aa12.94□□□□□ -0.34
TNXB-205ENST00000486148 GAGE4Q13068 117 aa12.94□□□□□ -0.34
TNXB-205ENST00000486148 OPRPNQ99935 248 aaPredicted RBP12.94□□□□□ -0.34
TNXB-205ENST00000486148 FBN2P35556 2912 aa12.94□□□□□ -0.34
TNXB-205ENST00000486148 POLQO75417 2590 aa12.94□□□□□ -0.34
TNXB-205ENST00000486148 MYO18BQ8IUG5 2567 aa12.94□□□□□ -0.34
TNXB-205ENST00000486148 HOXD3P31249 432 aaPredicted RBP12.93□□□□□ -0.34
TNXB-205ENST00000486148 TSPEAR-AS2P59090 65 aa12.93□□□□□ -0.34
TNXB-205ENST00000486148 PAPPA-AS1Q5QFB9 102 aa12.93□□□□□ -0.34
TNXB-205ENST00000486148 ZNF876PQ49A33 203 aa12.93□□□□□ -0.34
TNXB-205ENST00000486148 ANKRD17O75179 2603 aaKnown RBP12.93□□□□□ -0.34
TNXB-205ENST00000486148 HERVK_113P61574 105 aa12.92□□□□□ -0.34
TNXB-205ENST00000486148 GAGE2BQ13066 116 aa12.92□□□□□ -0.34
TNXB-205ENST00000486148 GAGE2EQ4V326 116 aa12.92□□□□□ -0.34
TNXB-205ENST00000486148 TMEM170BQ5T4T1 132 aa12.92□□□□□ -0.34
TNXB-205ENST00000486148 GAGE2DQ9UEU5 116 aa12.92□□□□□ -0.34
TNXB-205ENST00000486148 VPREB3Q9UKI3 123 aa12.92□□□□□ -0.34
TNXB-205ENST00000486148 ZNF702PQ9H963 129 aa12.92□□□□□ -0.34
TNXB-205ENST00000486148 P0DMU3 169 aa12.91□□□□□ -0.34
TNXB-205ENST00000486148 FAM231AP0DMU4 169 aa12.91□□□□□ -0.34
TNXB-205ENST00000486148 FAM231CP0DMU5 169 aa12.91□□□□□ -0.34
TNXB-205ENST00000486148 LYRM7Q5U5X0 104 aa12.91□□□□□ -0.34
TNXB-205ENST00000486148 A0A0J9YY99 117 aa12.91□□□□□ -0.34
TNXB-205ENST00000486148 RBMY1A1P0DJD3 496 aaKnown RBP12.91□□□□□ -0.34
TNXB-205ENST00000486148 RBMY1CP0DJD4 496 aa12.91□□□□□ -0.34
TNXB-205ENST00000486148 RBMY1FQ15415 496 aaKnown RBP12.91□□□□□ -0.34
TNXB-205ENST00000486148 J3QLI3 93 aa12.9□□□□□ -0.34
TNXB-205ENST00000486148 CFC1BP0CG36 223 aa12.9□□□□□ -0.34
TNXB-205ENST00000486148 CFC1P0CG37 223 aa12.9□□□□□ -0.34
TNXB-205ENST00000486148 TRPT1Q86TN4 253 aaKnown RBP12.9□□□□□ -0.34
TNXB-205ENST00000486148 MXRA5Q9NR99 2828 aa12.9□□□□□ -0.34
TNXB-205ENST00000486148 ELANEP08246 267 aa12.9□□□□□ -0.34
TNXB-205ENST00000486148 NSUN5P1Q3KNT7 163 aa12.9□□□□□ -0.34
TNXB-205ENST00000486148 C18orf65Q6ZTR6 163 aa12.89□□□□□ -0.35
TNXB-205ENST00000486148 KNCNA6PVL3 124 aa12.89□□□□□ -0.35
TNXB-205ENST00000486148 SNCGO76070 127 aa12.89□□□□□ -0.35
TNXB-205ENST00000486148 UBE2E2Q96LR5 201 aa12.89□□□□□ -0.35
TNXB-205ENST00000486148 BEX4Q9NWD9 120 aaPredicted RBP12.89□□□□□ -0.35
TNXB-205ENST00000486148 SLC25A20O43772 301 aa12.88□□□□□ -0.35
TNXB-205ENST00000486148 DEFB136Q30KP8 78 aa12.88□□□□□ -0.35
TNXB-205ENST00000486148 Q6YL49 198 aa12.88□□□□□ -0.35
TNXB-205ENST00000486148 IFITM1P13164 125 aa12.88□□□□□ -0.35
TNXB-205ENST00000486148 RHOHQ15669 191 aa12.88□□□□□ -0.35
TNXB-205ENST00000486148 AMELXQ99217 191 aa12.88□□□□□ -0.35
TNXB-205ENST00000486148 HTN1P15515 57 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 158.9 ms