RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 A0A1B0GW15 77 aa6.78□□□□□ -1.32
SND1-213ENST00000486037 NXPH4O95158 308 aa6.78□□□□□ -1.32
SND1-213ENST00000486037 RAB4BP61018 213 aa6.78□□□□□ -1.32
SND1-213ENST00000486037 CACNG7P62955 275 aa6.78□□□□□ -1.32
SND1-213ENST00000486037 TWIST1Q15672 202 aa6.78□□□□□ -1.32
SND1-213ENST00000486037 COX19Q49B96 90 aa6.78□□□□□ -1.32
SND1-213ENST00000486037 ZNF705AQ6ZN79 300 aaPredicted RBP6.78□□□□□ -1.32
SND1-213ENST00000486037 C11orf72Q8NBR9 251 aa6.78□□□□□ -1.32
SND1-213ENST00000486037 TMEM208Q9BTX3 173 aa6.78□□□□□ -1.32
SND1-213ENST00000486037 GOLT1BQ9Y3E0 138 aa6.78□□□□□ -1.32
SND1-213ENST00000486037 TNXBP22105 4242 aa6.77□□□□□ -1.33
SND1-213ENST00000486037 M0R381 172 aa6.77□□□□□ -1.33
SND1-213ENST00000486037 HLA-DQA1P01909 254 aa6.77□□□□□ -1.33
SND1-213ENST00000486037 MT-ND6P03923 174 aa6.77□□□□□ -1.33
SND1-213ENST00000486037 ZNF415Q09FC8 603 aa6.77□□□□□ -1.33
SND1-213ENST00000486037 SLAQ13239 276 aa6.77□□□□□ -1.33
SND1-213ENST00000486037 ZNF493Q6ZR52 646 aa6.77□□□□□ -1.33
SND1-213ENST00000486037 ZFP82Q8N141 532 aa6.77□□□□□ -1.33
SND1-213ENST00000486037 GSN-AS1Q9NRJ2 163 aa6.77□□□□□ -1.33
SND1-213ENST00000486037 PHLDA3Q9Y5J5 127 aa6.77□□□□□ -1.33
SND1-213ENST00000486037 C1orf196B1AJZ1 125 aa6.76□□□□□ -1.33
SND1-213ENST00000486037 FAM229AH3BQW9 127 aa6.76□□□□□ -1.33
SND1-213ENST00000486037 S100A8P05109 93 aa6.76□□□□□ -1.33
SND1-213ENST00000486037 SPANXN1Q5VSR9 72 aa6.76□□□□□ -1.33
SND1-213ENST00000486037 Q6ZRN7 208 aaPredicted RBP6.76□□□□□ -1.33
SND1-213ENST00000486037 C15orf53Q8NAA6 179 aa6.76□□□□□ -1.33
SND1-213ENST00000486037 RNASE8Q8TDE3 154 aaKnown RBP6.76□□□□□ -1.33
SND1-213ENST00000486037 TMEM191AQ9H0A3 160 aa6.76□□□□□ -1.33
SND1-213ENST00000486037 PLAC8L1A1L4L8 177 aa6.75□□□□□ -1.33
SND1-213ENST00000486037 NUDT3O95989 172 aa6.75□□□□□ -1.33
SND1-213ENST00000486037 APCSP02743 223 aa6.75□□□□□ -1.33
SND1-213ENST00000486037 TRGC1P0CF51 173 aa6.75□□□□□ -1.33
SND1-213ENST00000486037 KIAA1644Q3SXP7 199 aa6.75□□□□□ -1.33
SND1-213ENST00000486037 AMN1Q8IY45 258 aa6.75□□□□□ -1.33
SND1-213ENST00000486037 TMEM263Q8WUH6 116 aaKnown RBP6.75□□□□□ -1.33
SND1-213ENST00000486037 Q9H8V8 135 aa6.75□□□□□ -1.33
SND1-213ENST00000486037 HIST1H2BKO60814 126 aa6.74□□□□□ -1.33
SND1-213ENST00000486037 HIST1H2BJP06899 126 aa6.74□□□□□ -1.33
SND1-213ENST00000486037 EVI2AP22794 236 aa6.74□□□□□ -1.33
SND1-213ENST00000486037 HIST1H2BOP23527 126 aa6.74□□□□□ -1.33
SND1-213ENST00000486037 HIST1H2BBP33778 126 aa6.74□□□□□ -1.33
SND1-213ENST00000486037 HIST1H2BDP58876 126 aa6.74□□□□□ -1.33
SND1-213ENST00000486037 RAB5BP61020 215 aa6.74□□□□□ -1.33
SND1-213ENST00000486037 HIST1H2BCP62807 126 aa6.74□□□□□ -1.33
SND1-213ENST00000486037 HIST2H2BEQ16778 126 aa6.74□□□□□ -1.33
SND1-213ENST00000486037 MRPL51Q4U2R6 128 aaKnown RBP6.74□□□□□ -1.33
SND1-213ENST00000486037 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.74□□□□□ -1.33
SND1-213ENST00000486037 FAM104BQ5XKR9 115 aa6.74□□□□□ -1.33
SND1-213ENST00000486037 HIST1H2BHQ93079 126 aa6.74□□□□□ -1.33
SND1-213ENST00000486037 RNF185Q96GF1 192 aa6.74□□□□□ -1.33
SND1-213ENST00000486037 HIST1H2BNQ99877 126 aa6.74□□□□□ -1.33
SND1-213ENST00000486037 HIST1H2BMQ99879 126 aa6.74□□□□□ -1.33
SND1-213ENST00000486037 JPT2Q9H910 190 aa6.74□□□□□ -1.33
SND1-213ENST00000486037 KIF25-AS1Q9Y6Z4 181 aa6.74□□□□□ -1.33
SND1-213ENST00000486037 M0R2P5 195 aa6.73□□□□□ -1.33
SND1-213ENST00000486037 DNAH10OSP0CZ25 163 aa6.73□□□□□ -1.33
SND1-213ENST00000486037 RAB4AP20338 218 aa6.73□□□□□ -1.33
SND1-213ENST00000486037 LINC00315P59091 139 aa6.73□□□□□ -1.33
SND1-213ENST00000486037 DAD1P61803 113 aa6.73□□□□□ -1.33
SND1-213ENST00000486037 RRN3P1Q2M238 152 aa6.73□□□□□ -1.33
SND1-213ENST00000486037 ZNF876PQ49A33 203 aa6.73□□□□□ -1.33
SND1-213ENST00000486037 C14orf178Q8N769 122 aaPredicted RBP6.73□□□□□ -1.33
SND1-213ENST00000486037 PTH2Q96A98 100 aa6.73□□□□□ -1.33
SND1-213ENST00000486037 C16orf74Q96GX8 76 aa6.73□□□□□ -1.33
SND1-213ENST00000486037 SPXQ9BT56 116 aa6.73□□□□□ -1.33
SND1-213ENST00000486037 MRPL16Q9NX20 251 aaKnown RBP6.73□□□□□ -1.33
SND1-213ENST00000486037 SMKR1H3BMG3 65 aa6.72□□□□□ -1.33
SND1-213ENST00000486037 SRIP30626 198 aa6.72□□□□□ -1.33
SND1-213ENST00000486037 CCL18P55774 89 aa6.72□□□□□ -1.33
SND1-213ENST00000486037 SMIM15Q7Z3B0 74 aa6.72□□□□□ -1.33
SND1-213ENST00000486037 AP1S3Q96PC3 154 aa6.72□□□□□ -1.33
SND1-213ENST00000486037 ALKBH7Q9BT30 221 aaPredicted RBP6.72□□□□□ -1.33
SND1-213ENST00000486037 SAMD10Q9BYL1 202 aa6.72□□□□□ -1.33
SND1-213ENST00000486037 DPH3P1Q9H4G8 78 aa6.72□□□□□ -1.33
SND1-213ENST00000486037 A0A087WWL8 130 aa6.71□□□□□ -1.34
SND1-213ENST00000486037 TEX48A0A1B0GUV7 120 aa6.71□□□□□ -1.34
SND1-213ENST00000486037 SMIM9A6NGZ8 99 aa6.71□□□□□ -1.34
SND1-213ENST00000486037 GAS8-AS1O95177 125 aa6.71□□□□□ -1.34
SND1-213ENST00000486037 NCR2O95944 276 aa6.71□□□□□ -1.34
SND1-213ENST00000486037 CRYGDP07320 174 aa6.71□□□□□ -1.34
SND1-213ENST00000486037 DAZ2Q13117 558 aaKnown RBP6.71□□□□□ -1.34
SND1-213ENST00000486037 PIK3CD-AS1Q5SR53 167 aa6.71□□□□□ -1.34
SND1-213ENST00000486037 Q6ZTI0 123 aa6.71□□□□□ -1.34
SND1-213ENST00000486037 NOP10Q9NPE3 64 aaKnown RBP6.71□□□□□ -1.34
SND1-213ENST00000486037 D6R8Y8 96 aa6.7□□□□□ -1.34
SND1-213ENST00000486037 RS1O15537 224 aa6.7□□□□□ -1.34
SND1-213ENST00000486037 MGPP08493 103 aa6.7□□□□□ -1.34
SND1-213ENST00000486037 GATA1P15976 413 aaPredicted RBP6.7□□□□□ -1.34
SND1-213ENST00000486037 NDUFA6P56556 154 aa6.7□□□□□ -1.34
SND1-213ENST00000486037 IQCJQ1A5X6 159 aa6.7□□□□□ -1.34
SND1-213ENST00000486037 TTC32Q5I0X7 151 aa6.7□□□□□ -1.34
SND1-213ENST00000486037 CDPF1Q6NVV7 123 aa6.7□□□□□ -1.34
SND1-213ENST00000486037 C18orf32Q8TCD1 76 aa6.7□□□□□ -1.34
SND1-213ENST00000486037 RASL10AQ92737 203 aa6.7□□□□□ -1.34
SND1-213ENST00000486037 TNFRSF18Q9Y5U5 241 aa6.7□□□□□ -1.34
SND1-213ENST00000486037 TRGV1A0A0A0MS02 117 aa6.69□□□□□ -1.34
SND1-213ENST00000486037 TRAV26-2A0A0B4J265 109 aa6.69□□□□□ -1.34
SND1-213ENST00000486037 A8MWV9 139 aa6.69□□□□□ -1.34
SND1-213ENST00000486037 F5H768 121 aa6.69□□□□□ -1.34
SND1-213ENST00000486037 LCE2BO14633 110 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms