RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 GFRA4Q9GZZ7 299 aa3.93□□□□□ -1.78
SMC4-217ENST00000485867 C11orf1Q9H5F2 150 aa3.93□□□□□ -1.78
SMC4-217ENST00000485867 VCX3AQ9NNX9 186 aa3.93□□□□□ -1.78
SMC4-217ENST00000485867 OTORQ9NRC9 128 aa3.93□□□□□ -1.78
SMC4-217ENST00000485867 LYRM2Q9NU23 88 aaPredicted RBP3.93□□□□□ -1.78
SMC4-217ENST00000485867 GSKIPQ9P0R6 139 aa3.93□□□□□ -1.78
SMC4-217ENST00000485867 TRAV8-4A0A0B4J246 113 aa3.92□□□□□ -1.78
SMC4-217ENST00000485867 GCGP01275 180 aa3.92□□□□□ -1.78
SMC4-217ENST00000485867 P01737 135 aa3.92□□□□□ -1.78
SMC4-217ENST00000485867 GZMBP10144 247 aa3.92□□□□□ -1.78
SMC4-217ENST00000485867 S100A4P26447 101 aaKnown RBP3.92□□□□□ -1.78
SMC4-217ENST00000485867 GNG5P63218 68 aa3.92□□□□□ -1.78
SMC4-217ENST00000485867 GAGE6Q13070 117 aa3.92□□□□□ -1.78
SMC4-217ENST00000485867 CTF1Q16619 201 aa3.92□□□□□ -1.78
SMC4-217ENST00000485867 HIGD2BQ4VC39 106 aa3.92□□□□□ -1.78
SMC4-217ENST00000485867 NTM-AS1Q6ZSK4 140 aa3.92□□□□□ -1.78
SMC4-217ENST00000485867 FER1L6-AS1Q8NA97 138 aa3.92□□□□□ -1.78
SMC4-217ENST00000485867 DIRC1Q969H9 104 aa3.92□□□□□ -1.78
SMC4-217ENST00000485867 TRIM63Q969Q1 353 aa3.92□□□□□ -1.78
SMC4-217ENST00000485867 SGK494Q96LW2 274 aa3.92□□□□□ -1.78
SMC4-217ENST00000485867 NDFIP1Q9BT67 221 aa3.92□□□□□ -1.78
SMC4-217ENST00000485867 NAA50Q9GZZ1 169 aaKnown RBP3.92□□□□□ -1.78
SMC4-217ENST00000485867 IL36BQ9NZH7 164 aa3.92□□□□□ -1.78
SMC4-217ENST00000485867 OR5AC2Q9NZP5 309 aa3.92□□□□□ -1.78
SMC4-217ENST00000485867 LINC00474Q9P2X8 69 aa3.92□□□□□ -1.78
SMC4-217ENST00000485867 RSL24D1Q9UHA3 163 aaKnown RBP3.92□□□□□ -1.78
SMC4-217ENST00000485867 A0A087WXM4 84 aa3.91□□□□□ -1.78
SMC4-217ENST00000485867 IGKV3D-20A0A0C4DH25 116 aa3.91□□□□□ -1.78
SMC4-217ENST00000485867 IGSF23A1L1A6 192 aa3.91□□□□□ -1.78
SMC4-217ENST00000485867 H3BVH4 76 aa3.91□□□□□ -1.78
SMC4-217ENST00000485867 KRTAP1-4P0C5Y4 121 aa3.91□□□□□ -1.78
SMC4-217ENST00000485867 S100A11P31949 105 aa3.91□□□□□ -1.78
SMC4-217ENST00000485867 SULT1A1P50225 295 aa3.91□□□□□ -1.78
SMC4-217ENST00000485867 RAB5CP51148 216 aa3.91□□□□□ -1.78
SMC4-217ENST00000485867 LINC01547P58512 204 aaPredicted RBP3.91□□□□□ -1.78
SMC4-217ENST00000485867 ARL6IP6Q8N6S5 226 aa3.91□□□□□ -1.78
SMC4-217ENST00000485867 C20orf203Q8NBC4 194 aa3.91□□□□□ -1.78
SMC4-217ENST00000485867 SUN5Q8TC36 379 aa3.91□□□□□ -1.78
SMC4-217ENST00000485867 MITD1Q8WV92 249 aa3.91□□□□□ -1.78
SMC4-217ENST00000485867 SFRP2Q96HF1 295 aa3.91□□□□□ -1.78
SMC4-217ENST00000485867 LSM5Q9Y4Y9 91 aaKnown RBP3.91□□□□□ -1.78
SMC4-217ENST00000485867 H0Y9J4 135 aa3.9□□□□□ -1.79
SMC4-217ENST00000485867 MT-ND6P03923 174 aa3.9□□□□□ -1.79
SMC4-217ENST00000485867 AP3S2P59780 193 aa3.9□□□□□ -1.79
SMC4-217ENST00000485867 HBG1P69891 147 aa3.9□□□□□ -1.79
SMC4-217ENST00000485867 HBG2P69892 147 aa3.9□□□□□ -1.79
SMC4-217ENST00000485867 SMUG1Q53HV7 270 aa3.9□□□□□ -1.79
SMC4-217ENST00000485867 FAM74A1Q5RGS3 127 aa3.9□□□□□ -1.79
SMC4-217ENST00000485867 CFAP161Q6P656 301 aa3.9□□□□□ -1.79
SMC4-217ENST00000485867 OR11H4Q8NGC9 324 aa3.9□□□□□ -1.79
SMC4-217ENST00000485867 THAP6Q8TBB0 222 aa3.9□□□□□ -1.79
SMC4-217ENST00000485867 IGLV4-60A0A075B6I1 120 aa3.89□□□□□ -1.79
SMC4-217ENST00000485867 GVQW2A0A096LPI5 108 aaPredicted RBP3.89□□□□□ -1.79
SMC4-217ENST00000485867 TRAV1-1A0A0B4J248 108 aa3.89□□□□□ -1.79
SMC4-217ENST00000485867 EIF3GO75821 320 aaKnown RBP eCLIP3.89□□□□□ -1.79
SMC4-217ENST00000485867 ARMS2P0C7Q2 107 aa3.89□□□□□ -1.79
SMC4-217ENST00000485867 ATP6V1FQ16864 119 aa3.89□□□□□ -1.79
SMC4-217ENST00000485867 ZFP69Q49AA0 526 aa3.89□□□□□ -1.79
SMC4-217ENST00000485867 KHDC3LQ587J8 217 aa3.89□□□□□ -1.79
SMC4-217ENST00000485867 TMEM97Q5BJF2 176 aa3.89□□□□□ -1.79
SMC4-217ENST00000485867 C1orf137Q5JT78 98 aa3.89□□□□□ -1.79
SMC4-217ENST00000485867 PRR27Q6MZM9 219 aa3.89□□□□□ -1.79
SMC4-217ENST00000485867 STX12Q86Y82 276 aa3.89□□□□□ -1.79
SMC4-217ENST00000485867 TOMM5Q8N4H5 51 aa3.89□□□□□ -1.79
SMC4-217ENST00000485867 TMEM252Q8N6L7 170 aa3.89□□□□□ -1.79
SMC4-217ENST00000485867 MBD2Q9UBB5 411 aa3.89□□□□□ -1.79
SMC4-217ENST00000485867 PKIGQ9Y2B9 76 aa3.89□□□□□ -1.79
SMC4-217ENST00000485867 PAM16Q9Y3D7 125 aa3.89□□□□□ -1.79
SMC4-217ENST00000485867 TRBV25-1A0A075B6N4 114 aa3.88□□□□□ -1.79
SMC4-217ENST00000485867 TRBV6-1A0A0K0K1D8 114 aa3.88□□□□□ -1.79
SMC4-217ENST00000485867 SERTM2A0A1B0GWG4 89 aa3.88□□□□□ -1.79
SMC4-217ENST00000485867 A0A1W2PNN7 141 aa3.88□□□□□ -1.79
SMC4-217ENST00000485867 M0R381 172 aa3.88□□□□□ -1.79
SMC4-217ENST00000485867 TSPAN13O95857 204 aa3.88□□□□□ -1.79
SMC4-217ENST00000485867 IGLV7-43P04211 117 aa3.88□□□□□ -1.79
SMC4-217ENST00000485867 RPL13AP40429 203 aaKnown RBP3.88□□□□□ -1.79
SMC4-217ENST00000485867 UBE2D1P51668 147 aa3.88□□□□□ -1.79
SMC4-217ENST00000485867 TAS2R45P59539 299 aa3.88□□□□□ -1.79
SMC4-217ENST00000485867 RAB2AP61019 212 aa3.88□□□□□ -1.79
SMC4-217ENST00000485867 IQCJQ1A5X6 159 aa3.88□□□□□ -1.79
SMC4-217ENST00000485867 DNLZQ5SXM8 178 aa3.88□□□□□ -1.79
SMC4-217ENST00000485867 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.88□□□□□ -1.79
SMC4-217ENST00000485867 DERL1Q9BUN8 251 aa3.88□□□□□ -1.79
SMC4-217ENST00000485867 KCNIP2Q9NS61 270 aa3.88□□□□□ -1.79
SMC4-217ENST00000485867 FLVCR2Q9UPI3 526 aa3.88□□□□□ -1.79
SMC4-217ENST00000485867 PSG8Q9UQ74 426 aa3.88□□□□□ -1.79
SMC4-217ENST00000485867 IGHV1-24A0A0C4DH33 117 aa3.87□□□□□ -1.79
SMC4-217ENST00000485867 B4DEV8 164 aa3.87□□□□□ -1.79
SMC4-217ENST00000485867 NDUFB6O95139 128 aa3.87□□□□□ -1.79
SMC4-217ENST00000485867 TCRAP04437 139 aa3.87□□□□□ -1.79
SMC4-217ENST00000485867 PVALBP20472 110 aaPredicted RBP3.87□□□□□ -1.79
SMC4-217ENST00000485867 KRTAP5-9P26371 169 aa3.87□□□□□ -1.79
SMC4-217ENST00000485867 RAB4BP61018 213 aa3.87□□□□□ -1.79
SMC4-217ENST00000485867 FLI1Q01543 452 aaPredicted RBP3.87□□□□□ -1.79
SMC4-217ENST00000485867 ZNF56Q15929 161 aa3.87□□□□□ -1.79
SMC4-217ENST00000485867 PRNTQ86SH4 94 aa3.87□□□□□ -1.79
SMC4-217ENST00000485867 OR5C1Q8NGR4 320 aa3.87□□□□□ -1.79
SMC4-217ENST00000485867 DEDD2Q8WXF8 326 aa3.87□□□□□ -1.79
SMC4-217ENST00000485867 MRPS26Q9BYN8 205 aaKnown RBP3.87□□□□□ -1.79
SMC4-217ENST00000485867 PHLDA3Q9Y5J5 127 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms