RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 EVI2AP22794 236 aa5.74□□□□□ -1.49
SF3A1-208ENST00000485618 PKIAP61925 76 aa5.74□□□□□ -1.49
SF3A1-208ENST00000485618 GAGE1Q13065 139 aa5.74□□□□□ -1.49
SF3A1-208ENST00000485618 GAGE4Q13068 117 aa5.74□□□□□ -1.49
SF3A1-208ENST00000485618 GAGE5Q13069 117 aa5.74□□□□□ -1.49
SF3A1-208ENST00000485618 ESRGQ1W209 222 aa5.74□□□□□ -1.49
SF3A1-208ENST00000485618 GAGE13Q4V321 117 aa5.74□□□□□ -1.49
SF3A1-208ENST00000485618 TTC32Q5I0X7 151 aa5.74□□□□□ -1.49
SF3A1-208ENST00000485618 RASL11AQ6T310 242 aa5.74□□□□□ -1.49
SF3A1-208ENST00000485618 DAZ4Q86SG3 579 aaKnown RBP5.74□□□□□ -1.49
SF3A1-208ENST00000485618 ZNRF2Q8NHG8 242 aa5.74□□□□□ -1.49
SF3A1-208ENST00000485618 TMEM191AQ9H0A3 160 aa5.74□□□□□ -1.49
SF3A1-208ENST00000485618 GTSF1LQ9H1H1 148 aa5.74□□□□□ -1.49
SF3A1-208ENST00000485618 DAZ3Q9NR90 486 aaKnown RBP5.74□□□□□ -1.49
SF3A1-208ENST00000485618 MSRB1Q9NZV6 116 aa5.74□□□□□ -1.49
SF3A1-208ENST00000485618 MRPS16Q9Y3D3 137 aaKnown RBP5.74□□□□□ -1.49
SF3A1-208ENST00000485618 TRAV9-1A0A075B6T8 112 aa5.73□□□□□ -1.49
SF3A1-208ENST00000485618 CAMPP49913 170 aa5.73□□□□□ -1.49
SF3A1-208ENST00000485618 HBBP68871 147 aa5.73□□□□□ -1.49
SF3A1-208ENST00000485618 C10orf91Q5T1B1 145 aa5.73□□□□□ -1.49
SF3A1-208ENST00000485618 MRAP2Q96G30 205 aa5.73□□□□□ -1.49
SF3A1-208ENST00000485618 UPK3BQ9BT76 320 aa5.73□□□□□ -1.49
SF3A1-208ENST00000485618 Q9H8V8 135 aa5.73□□□□□ -1.49
SF3A1-208ENST00000485618 NIT2Q9NQR4 276 aa5.73□□□□□ -1.49
SF3A1-208ENST00000485618 CARHSP1Q9Y2V2 147 aaKnown RBP5.73□□□□□ -1.49
SF3A1-208ENST00000485618 LINC00588Q9Y4M8 146 aa5.73□□□□□ -1.49
SF3A1-208ENST00000485618 KIF25-AS1Q9Y6Z4 181 aa5.73□□□□□ -1.49
SF3A1-208ENST00000485618 URGCP-MRPS24S4R325 110 aa5.73□□□□□ -1.49
SF3A1-208ENST00000485618 M0QY20 66 aa5.72□□□□□ -1.49
SF3A1-208ENST00000485618 SIVA1O15304 175 aa5.72□□□□□ -1.49
SF3A1-208ENST00000485618 APOC3P02656 99 aa5.72□□□□□ -1.49
SF3A1-208ENST00000485618 BTF3P20290 206 aaKnown RBP5.72□□□□□ -1.49
SF3A1-208ENST00000485618 OR10J3Q5JRS4 329 aa5.72□□□□□ -1.49
SF3A1-208ENST00000485618 LELP1Q5T871 98 aa5.72□□□□□ -1.49
SF3A1-208ENST00000485618 SUMO4Q6EEV6 95 aa5.72□□□□□ -1.49
SF3A1-208ENST00000485618 Q6ZSN1 163 aa5.72□□□□□ -1.49
SF3A1-208ENST00000485618 CLRN3Q8NCR9 226 aa5.72□□□□□ -1.49
SF3A1-208ENST00000485618 HECTD4Q9Y4D8 3996 aa5.71□□□□□ -1.49
SF3A1-208ENST00000485618 LOC100131303A0A0U1RQF7 123 aa5.71□□□□□ -1.5
SF3A1-208ENST00000485618 C7orf77A4D0Y5 90 aa5.71□□□□□ -1.5
SF3A1-208ENST00000485618 PPBPP02775 128 aa5.71□□□□□ -1.5
SF3A1-208ENST00000485618 LINC00315P59091 139 aa5.71□□□□□ -1.5
SF3A1-208ENST00000485618 UBE2D3P61077 147 aa5.71□□□□□ -1.5
SF3A1-208ENST00000485618 UBE2D2P62837 147 aa5.71□□□□□ -1.5
SF3A1-208ENST00000485618 COX19Q49B96 90 aa5.71□□□□□ -1.5
SF3A1-208ENST00000485618 C10orf126Q8N4M7 172 aa5.71□□□□□ -1.5
SF3A1-208ENST00000485618 RPS10P5Q9NQ39 176 aa5.71□□□□□ -1.5
SF3A1-208ENST00000485618 IGHV3-38A0A0C4DH36 116 aa5.7□□□□□ -1.5
SF3A1-208ENST00000485618 TCAPO15273 167 aa5.7□□□□□ -1.5
SF3A1-208ENST00000485618 ADCYAP1P18509 176 aa5.7□□□□□ -1.5
SF3A1-208ENST00000485618 CKS2P33552 79 aa5.7□□□□□ -1.5
SF3A1-208ENST00000485618 ELOBQ15370 118 aa5.7□□□□□ -1.5
SF3A1-208ENST00000485618 FAM104BQ5XKR9 115 aa5.7□□□□□ -1.5
SF3A1-208ENST00000485618 MRPL54Q6P161 138 aaKnown RBP5.7□□□□□ -1.5
SF3A1-208ENST00000485618 NEXN-AS1Q8NBZ9 246 aa5.7□□□□□ -1.5
SF3A1-208ENST00000485618 ST20Q9HBF5 79 aa5.7□□□□□ -1.5
SF3A1-208ENST00000485618 TRBV25-1A0A075B6N4 114 aa5.69□□□□□ -1.5
SF3A1-208ENST00000485618 A0A087WX48 190 aa5.69□□□□□ -1.5
SF3A1-208ENST00000485618 NBDYA0A0U1RRE5 68 aa5.69□□□□□ -1.5
SF3A1-208ENST00000485618 TMEM262E9PQX1 116 aa5.69□□□□□ -1.5
SF3A1-208ENST00000485618 VCYO14598 125 aa5.69□□□□□ -1.5
SF3A1-208ENST00000485618 NCR2O95944 276 aa5.69□□□□□ -1.5
SF3A1-208ENST00000485618 RAB4AP20338 218 aa5.69□□□□□ -1.5
SF3A1-208ENST00000485618 PMCHP20382 165 aa5.69□□□□□ -1.5
SF3A1-208ENST00000485618 SMAGPQ0VAQ4 97 aa5.69□□□□□ -1.5
SF3A1-208ENST00000485618 COTL1Q14019 142 aa5.69□□□□□ -1.5
SF3A1-208ENST00000485618 GATD1Q8NB37 220 aa5.69□□□□□ -1.5
SF3A1-208ENST00000485618 IGLV2-18A0A075B6J9 118 aa5.68□□□□□ -1.5
SF3A1-208ENST00000485618 TRBV6-8A0A0A6YYG3 113 aa5.68□□□□□ -1.5
SF3A1-208ENST00000485618 IGHV1-24A0A0C4DH33 117 aa5.68□□□□□ -1.5
SF3A1-208ENST00000485618 TRBV6-5A0A0K0K1A5 114 aa5.68□□□□□ -1.5
SF3A1-208ENST00000485618 I3L3M4 83 aa5.68□□□□□ -1.5
SF3A1-208ENST00000485618 PHOX2AO14813 284 aa5.68□□□□□ -1.5
SF3A1-208ENST00000485618 UBE2L6O14933 153 aa5.68□□□□□ -1.5
SF3A1-208ENST00000485618 DNAH10OSP0CZ25 163 aa5.68□□□□□ -1.5
SF3A1-208ENST00000485618 LINC00694P0DN24 101 aa5.68□□□□□ -1.5
SF3A1-208ENST00000485618 NFE4Q86UQ8 179 aa5.68□□□□□ -1.5
SF3A1-208ENST00000485618 AMN1Q8IY45 258 aa5.68□□□□□ -1.5
SF3A1-208ENST00000485618 ORMDL3Q8N138 153 aa5.68□□□□□ -1.5
SF3A1-208ENST00000485618 KIR2DL4Q99706 377 aa5.68□□□□□ -1.5
SF3A1-208ENST00000485618 C20orf78Q9BR46 151 aa5.68□□□□□ -1.5
SF3A1-208ENST00000485618 CHCHD7Q9BUK0 85 aa5.68□□□□□ -1.5
SF3A1-208ENST00000485618 LAMTOR2Q9Y2Q5 125 aa5.68□□□□□ -1.5
SF3A1-208ENST00000485618 TRAV26-2A0A0B4J265 109 aa5.67□□□□□ -1.5
SF3A1-208ENST00000485618 A0A1B0GXF2 115 aa5.67□□□□□ -1.5
SF3A1-208ENST00000485618 M0R2N4 97 aa5.67□□□□□ -1.5
SF3A1-208ENST00000485618 MT-ND6P03923 174 aa5.67□□□□□ -1.5
SF3A1-208ENST00000485618 LINC01556Q5JQF7 62 aa5.67□□□□□ -1.5
SF3A1-208ENST00000485618 C1orf134Q5TEV5 83 aa5.67□□□□□ -1.5
SF3A1-208ENST00000485618 CHCHD5Q9BSY4 110 aa5.67□□□□□ -1.5
SF3A1-208ENST00000485618 TMEM243Q9BU79 118 aa5.67□□□□□ -1.5
SF3A1-208ENST00000485618 SDHAF1A6NFY7 115 aa5.66□□□□□ -1.5
SF3A1-208ENST00000485618 HLA-DQA1P01909 254 aa5.66□□□□□ -1.5
SF3A1-208ENST00000485618 G0S2P27469 103 aa5.66□□□□□ -1.5
SF3A1-208ENST00000485618 FCER1GP30273 86 aa5.66□□□□□ -1.5
SF3A1-208ENST00000485618 AMTP48728 403 aa5.66□□□□□ -1.5
SF3A1-208ENST00000485618 SUMO2P61956 95 aaKnown RBP5.66□□□□□ -1.5
SF3A1-208ENST00000485618 IQCJQ1A5X6 159 aa5.66□□□□□ -1.5
SF3A1-208ENST00000485618 MRPL51Q4U2R6 128 aaKnown RBP5.66□□□□□ -1.5
SF3A1-208ENST00000485618 TMEM136Q6ZRR5 245 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms