RNA–Protein interactions for RNA: ENST00000485592.5

SMARCD3-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 820 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-211ENST00000485592 VAX2Q9UIW0 290 aa8.95□□□□□ -0.98
SMARCD3-211ENST00000485592 HMCN2Q8NDA2 5059 aa8.95□□□□□ -0.98
SMARCD3-211ENST00000485592 KRBOX1C9JBD0 128 aa8.94□□□□□ -0.98
SMARCD3-211ENST00000485592 PDE6DO43924 150 aa8.94□□□□□ -0.98
SMARCD3-211ENST00000485592 IFNA1P01562 189 aa8.94□□□□□ -0.98
SMARCD3-211ENST00000485592 CRPP02741 224 aa8.94□□□□□ -0.98
SMARCD3-211ENST00000485592 LINC01559Q495D7 138 aa8.94□□□□□ -0.98
SMARCD3-211ENST00000485592 CENPWQ5EE01 88 aa8.94□□□□□ -0.98
SMARCD3-211ENST00000485592 M0R036 132 aa8.93□□□□□ -0.98
SMARCD3-211ENST00000485592 RPL36AP83881 106 aaKnown RBP8.93□□□□□ -0.98
SMARCD3-211ENST00000485592 DNLZQ5SXM8 178 aa8.93□□□□□ -0.98
SMARCD3-211ENST00000485592 TEX261Q6UWH6 196 aa8.93□□□□□ -0.98
SMARCD3-211ENST00000485592 BAGE2Q86Y30 109 aa8.93□□□□□ -0.98
SMARCD3-211ENST00000485592 RPL36ALQ969Q0 106 aaKnown RBP8.93□□□□□ -0.98
SMARCD3-211ENST00000485592 FAT3Q8TDW7 4589 aa8.93□□□□□ -0.98
SMARCD3-211ENST00000485592 A0A087WWL8 130 aa8.92□□□□□ -0.98
SMARCD3-211ENST00000485592 TRBV10-1A0A0K0K1A3 114 aa8.92□□□□□ -0.98
SMARCD3-211ENST00000485592 RAB19A4D1S5 217 aa8.92□□□□□ -0.98
SMARCD3-211ENST00000485592 TMEM262E9PQX1 116 aa8.92□□□□□ -0.98
SMARCD3-211ENST00000485592 ARMS2P0C7Q2 107 aa8.92□□□□□ -0.98
SMARCD3-211ENST00000485592 TAGLN2P37802 199 aaKnown RBP8.92□□□□□ -0.98
SMARCD3-211ENST00000485592 RPL19P84098 196 aaKnown RBP8.92□□□□□ -0.98
SMARCD3-211ENST00000485592 PHLDA3Q9Y5J5 127 aa8.92□□□□□ -0.98
SMARCD3-211ENST00000485592 SFRP2Q96HF1 295 aa8.91□□□□□ -0.98
SMARCD3-211ENST00000485592 TRBV7-3A0A075B6L6 115 aa8.9□□□□□ -0.98
SMARCD3-211ENST00000485592 TMSB15BA0A087X1C1 80 aa8.9□□□□□ -0.98
SMARCD3-211ENST00000485592 GRIFINA4D1Z8 144 aa8.9□□□□□ -0.98
SMARCD3-211ENST00000485592 M0R381 172 aa8.9□□□□□ -0.98
SMARCD3-211ENST00000485592 HLA-DQA1P01909 254 aa8.9□□□□□ -0.98
SMARCD3-211ENST00000485592 PRR27Q6MZM9 219 aa8.9□□□□□ -0.98
SMARCD3-211ENST00000485592 MED9Q9NWA0 146 aa8.9□□□□□ -0.98
SMARCD3-211ENST00000485592 C19orf71A6NCJ1 209 aa8.89□□□□□ -0.99
SMARCD3-211ENST00000485592 TMEM250H0YL14 139 aa8.89□□□□□ -0.99
SMARCD3-211ENST00000485592 ANGP03950 147 aaKnown RBP8.89□□□□□ -0.99
SMARCD3-211ENST00000485592 GNG4P50150 75 aa8.89□□□□□ -0.99
SMARCD3-211ENST00000485592 UBE2D3P61077 147 aa8.89□□□□□ -0.99
SMARCD3-211ENST00000485592 PKIAP61925 76 aa8.89□□□□□ -0.99
SMARCD3-211ENST00000485592 UBE2D2P62837 147 aa8.89□□□□□ -0.99
SMARCD3-211ENST00000485592 ENHOQ6UWT2 76 aa8.89□□□□□ -0.99
SMARCD3-211ENST00000485592 ZFP82Q8N141 532 aa8.89□□□□□ -0.99
SMARCD3-211ENST00000485592 C15orf54Q8N8G6 183 aa8.89□□□□□ -0.99
SMARCD3-211ENST00000485592 SMIM12Q96EX1 92 aa8.89□□□□□ -0.99
SMARCD3-211ENST00000485592 FAM210AQ96ND0 272 aa8.89□□□□□ -0.99
SMARCD3-211ENST00000485592 UBR4Q5T4S7 5183 aa8.88□□□□□ -0.99
SMARCD3-211ENST00000485592 TRBV6-8A0A0A6YYG3 113 aa8.88□□□□□ -0.99
SMARCD3-211ENST00000485592 USP17L23D6RBM5 183 aa8.88□□□□□ -0.99
SMARCD3-211ENST00000485592 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.88□□□□□ -0.99
SMARCD3-211ENST00000485592 DAZAP1Q96EP5 407 aaKnown RBP8.88□□□□□ -0.99
SMARCD3-211ENST00000485592 K7EN84 100 aa8.87□□□□□ -0.99
SMARCD3-211ENST00000485592 CXCL1P09341 107 aa8.87□□□□□ -0.99
SMARCD3-211ENST00000485592 HNRNPA3P51991 378 aaKnown RBP8.87□□□□□ -0.99
SMARCD3-211ENST00000485592 MPV17L2Q567V2 206 aa8.87□□□□□ -0.99
SMARCD3-211ENST00000485592 DGAT2L7PQ6IED9 249 aa8.87□□□□□ -0.99
SMARCD3-211ENST00000485592 OR10G8Q8NGN5 311 aa8.87□□□□□ -0.99
SMARCD3-211ENST00000485592 PKHD1L1Q86WI1 4243 aa8.87□□□□□ -0.99
SMARCD3-211ENST00000485592 SNAI2O43623 268 aa8.86□□□□□ -0.99
SMARCD3-211ENST00000485592 NDUFS6O75380 124 aaKnown RBP8.86□□□□□ -0.99
SMARCD3-211ENST00000485592 SRSF3P84103 164 aaKnown RBP8.86□□□□□ -0.99
SMARCD3-211ENST00000485592 ZNF56Q15929 161 aa8.86□□□□□ -0.99
SMARCD3-211ENST00000485592 MIAQ16674 131 aa8.86□□□□□ -0.99
SMARCD3-211ENST00000485592 C9orf163Q8N9P6 203 aa8.86□□□□□ -0.99
SMARCD3-211ENST00000485592 CHCHD5Q9BSY4 110 aa8.86□□□□□ -0.99
SMARCD3-211ENST00000485592 SSBP4Q9BWG4 385 aaPredicted RBP8.86□□□□□ -0.99
SMARCD3-211ENST00000485592 C9JQL5 133 aa8.85□□□□□ -0.99
SMARCD3-211ENST00000485592 PRSS1P07477 247 aa8.85□□□□□ -0.99
SMARCD3-211ENST00000485592 SRP19P09132 144 aaKnown RBP8.85□□□□□ -0.99
SMARCD3-211ENST00000485592 RAB4BP61018 213 aa8.85□□□□□ -0.99
SMARCD3-211ENST00000485592 OR10AG1Q8NH19 301 aa8.85□□□□□ -0.99
SMARCD3-211ENST00000485592 OR5AL1P0C617 328 aa8.84□□□□□ -0.99
SMARCD3-211ENST00000485592 IGLC6P0CF74 106 aa8.84□□□□□ -0.99
SMARCD3-211ENST00000485592 GZMBP10144 247 aa8.84□□□□□ -0.99
SMARCD3-211ENST00000485592 Q6ZRU5 148 aa8.84□□□□□ -0.99
SMARCD3-211ENST00000485592 NEXN-AS1Q8NBZ9 246 aa8.84□□□□□ -0.99
SMARCD3-211ENST00000485592 OCC1Q8TAD7 63 aa8.84□□□□□ -0.99
SMARCD3-211ENST00000485592 EIF5A2Q9GZV4 153 aaKnown RBP8.84□□□□□ -0.99
SMARCD3-211ENST00000485592 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.84□□□□□ -0.99
SMARCD3-211ENST00000485592 TMEM97Q5BJF2 176 aa8.83□□□□□ -1
SMARCD3-211ENST00000485592 CEBPGP53567 150 aa8.82□□□□□ -1
SMARCD3-211ENST00000485592 IFITM2Q01629 132 aa8.82□□□□□ -1
SMARCD3-211ENST00000485592 CLPSL2Q6UWE3 100 aa8.82□□□□□ -1
SMARCD3-211ENST00000485592 NUDT10Q8NFP7 164 aa8.82□□□□□ -1
SMARCD3-211ENST00000485592 OR2D3Q8NGH3 330 aa8.82□□□□□ -1
SMARCD3-211ENST00000485592 NUDT11Q96G61 164 aa8.82□□□□□ -1
SMARCD3-211ENST00000485592 RNASE7Q9H1E1 156 aaKnown RBP8.82□□□□□ -1
SMARCD3-211ENST00000485592 MUC21A0A0G2JKD1 596 aa8.81□□□□□ -1
SMARCD3-211ENST00000485592 MUC21A0A140T8X8 626 aa8.81□□□□□ -1
SMARCD3-211ENST00000485592 P01737 135 aa8.81□□□□□ -1
SMARCD3-211ENST00000485592 MT1HL1P0DM35 61 aa8.81□□□□□ -1
SMARCD3-211ENST00000485592 LINC01551Q86U37 167 aa8.81□□□□□ -1
SMARCD3-211ENST00000485592 CLRN3Q8NCR9 226 aa8.81□□□□□ -1
SMARCD3-211ENST00000485592 SMIM7Q9BQ49 75 aa8.81□□□□□ -1
SMARCD3-211ENST00000485592 PRR34Q9NV39 138 aa8.81□□□□□ -1
SMARCD3-211ENST00000485592 TRBV25-1A0A075B6N4 114 aa8.8□□□□□ -1
SMARCD3-211ENST00000485592 F5H697 171 aa8.8□□□□□ -1
SMARCD3-211ENST00000485592 CTRLP40313 264 aa8.8□□□□□ -1
SMARCD3-211ENST00000485592 SDIM1Q6ZPB5 146 aa8.8□□□□□ -1
SMARCD3-211ENST00000485592 LINC00269Q8N2A0 174 aa8.8□□□□□ -1
SMARCD3-211ENST00000485592 RPP21Q9H633 154 aaKnown RBP8.8□□□□□ -1
SMARCD3-211ENST00000485592 PANO1I0J062 215 aa8.79□□□□□ -1
SMARCD3-211ENST00000485592 RPS20P60866 119 aaKnown RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms