RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 NCR2O95944 276 aa8.13□□□□□ -1.11
APTX-227ENST00000485479 APOC3P02656 99 aa8.13□□□□□ -1.11
APTX-227ENST00000485479 MT-ND4LP03901 98 aa8.13□□□□□ -1.11
APTX-227ENST00000485479 WDR73Q6P4I2 378 aa8.13□□□□□ -1.11
APTX-227ENST00000485479 TRBV7-3A0A075B6L6 115 aa8.12□□□□□ -1.11
APTX-227ENST00000485479 RPL36AP83881 106 aaKnown RBP8.12□□□□□ -1.11
APTX-227ENST00000485479 RPL36ALQ969Q0 106 aaKnown RBP8.12□□□□□ -1.11
APTX-227ENST00000485479 URGCP-MRPS24S4R325 110 aa8.12□□□□□ -1.11
APTX-227ENST00000485479 UBE2D3P61077 147 aa8.11□□□□□ -1.11
APTX-227ENST00000485479 UBE2D2P62837 147 aa8.11□□□□□ -1.11
APTX-227ENST00000485479 OR10J3Q5JRS4 329 aa8.11□□□□□ -1.11
APTX-227ENST00000485479 C10orf91Q5T1B1 145 aa8.11□□□□□ -1.11
APTX-227ENST00000485479 SMIM15Q7Z3B0 74 aa8.11□□□□□ -1.11
APTX-227ENST00000485479 RNF185Q96GF1 192 aa8.11□□□□□ -1.11
APTX-227ENST00000485479 GTSF1LQ9H1H1 148 aa8.11□□□□□ -1.11
APTX-227ENST00000485479 PPP1R2P9O14990 202 aa8.11□□□□□ -1.11
APTX-227ENST00000485479 RPS10P46783 165 aaKnown RBP8.11□□□□□ -1.11
APTX-227ENST00000485479 RIGQ13278 110 aa8.11□□□□□ -1.11
APTX-227ENST00000485479 ANAPC16Q96DE5 110 aa8.11□□□□□ -1.11
APTX-227ENST00000485479 CARHSP1Q9Y2V2 147 aaKnown RBP8.11□□□□□ -1.11
APTX-227ENST00000485479 DNAH6Q9C0G6 4158 aa8.1□□□□□ -1.11
APTX-227ENST00000485479 TRBV10-1A0A0K0K1A3 114 aa8.1□□□□□ -1.11
APTX-227ENST00000485479 C7orf77A4D0Y5 90 aa8.1□□□□□ -1.11
APTX-227ENST00000485479 SIVA1O15304 175 aa8.1□□□□□ -1.11
APTX-227ENST00000485479 RASL11AQ6T310 242 aa8.1□□□□□ -1.11
APTX-227ENST00000485479 CLRN3Q8NCR9 226 aa8.1□□□□□ -1.11
APTX-227ENST00000485479 UPK3BQ9BT76 320 aa8.1□□□□□ -1.11
APTX-227ENST00000485479 TMEM191AQ9H0A3 160 aa8.1□□□□□ -1.11
APTX-227ENST00000485479 RPS10P5Q9NQ39 176 aa8.1□□□□□ -1.11
APTX-227ENST00000485479 TNFRSF18Q9Y5U5 241 aa8.1□□□□□ -1.11
APTX-227ENST00000485479 IGHV3-30P01768 117 aa8.1□□□□□ -1.11
APTX-227ENST00000485479 IGHV3-33P01772 117 aa8.1□□□□□ -1.11
APTX-227ENST00000485479 IGHV3-30-3P0DP02 117 aa8.1□□□□□ -1.11
APTX-227ENST00000485479 IGHV3-30-5P0DP03 117 aa8.1□□□□□ -1.11
APTX-227ENST00000485479 RAB4AP20338 218 aa8.1□□□□□ -1.11
APTX-227ENST00000485479 HBBP68871 147 aa8.1□□□□□ -1.11
APTX-227ENST00000485479 NBDYA0A0U1RRE5 68 aa8.09□□□□□ -1.11
APTX-227ENST00000485479 A0A1B0GXF2 115 aa8.09□□□□□ -1.11
APTX-227ENST00000485479 Q6ZR54 194 aa8.08□□□□□ -1.12
APTX-227ENST00000485479 SH2D6Q7Z4S9 175 aa8.08□□□□□ -1.12
APTX-227ENST00000485479 H7C1H1 209 aa8.08□□□□□ -1.12
APTX-227ENST00000485479 LELP1Q5T871 98 aa8.08□□□□□ -1.12
APTX-227ENST00000485479 ATRAIDQ6UW56 229 aa8.08□□□□□ -1.12
APTX-227ENST00000485479 NTM-AS1Q6ZSK4 140 aa8.08□□□□□ -1.12
APTX-227ENST00000485479 NIT2Q9NQR4 276 aa8.08□□□□□ -1.12
APTX-227ENST00000485479 EPPK1P58107 5090 aaKnown RBP8.07□□□□□ -1.12
APTX-227ENST00000485479 MRPL51Q4U2R6 128 aaKnown RBP8.07□□□□□ -1.12
APTX-227ENST00000485479 FAM104BQ5XKR9 115 aa8.06□□□□□ -1.12
APTX-227ENST00000485479 TRAV8-6A0A0B4J262 113 aa8.06□□□□□ -1.12
APTX-227ENST00000485479 DNAJC30Q96LL9 226 aa8.06□□□□□ -1.12
APTX-227ENST00000485479 TRBV6-8A0A0A6YYG3 113 aa8.05□□□□□ -1.12
APTX-227ENST00000485479 SDHAF1A6NFY7 115 aa8.05□□□□□ -1.12
APTX-227ENST00000485479 D6R8Y8 96 aa8.05□□□□□ -1.12
APTX-227ENST00000485479 RHEBQ15382 184 aa8.05□□□□□ -1.12
APTX-227ENST00000485479 DAZ4Q86SG3 579 aaKnown RBP8.05□□□□□ -1.12
APTX-227ENST00000485479 CTDSP1Q9GZU7 261 aa8.05□□□□□ -1.12
APTX-227ENST00000485479 DAZ3Q9NR90 486 aaKnown RBP8.05□□□□□ -1.12
APTX-227ENST00000485479 RTL8CO15255 209 aa8.04□□□□□ -1.12
APTX-227ENST00000485479 TIRAPP58753 221 aa8.04□□□□□ -1.12
APTX-227ENST00000485479 NDUFA5Q16718 116 aa8.04□□□□□ -1.12
APTX-227ENST00000485479 SVBPQ8N300 66 aa8.04□□□□□ -1.12
APTX-227ENST00000485479 BTF3L4Q96K17 158 aa8.04□□□□□ -1.12
APTX-227ENST00000485479 DNAH10OSP0CZ25 163 aa8.04□□□□□ -1.12
APTX-227ENST00000485479 CKS2P33552 79 aa8.04□□□□□ -1.12
APTX-227ENST00000485479 KCNIP4Q6PIL6 250 aa8.04□□□□□ -1.12
APTX-227ENST00000485479 ATP5L2Q7Z4Y8 100 aa8.04□□□□□ -1.12
APTX-227ENST00000485479 NRACQ8N912 160 aa8.04□□□□□ -1.12
APTX-227ENST00000485479 Q8N976 141 aa8.04□□□□□ -1.12
APTX-227ENST00000485479 CHCHD5Q9BSY4 110 aa8.04□□□□□ -1.12
APTX-227ENST00000485479 FAT2Q9NYQ8 4349 aa8.03□□□□□ -1.12
APTX-227ENST00000485479 TMEM262E9PQX1 116 aa8.03□□□□□ -1.12
APTX-227ENST00000485479 SNAPINO95295 136 aa8.03□□□□□ -1.12
APTX-227ENST00000485479 GAGE6Q13070 117 aa8.03□□□□□ -1.12
APTX-227ENST00000485479 KIAA1644Q3SXP7 199 aa8.03□□□□□ -1.12
APTX-227ENST00000485479 MPV17L2Q567V2 206 aa8.03□□□□□ -1.12
APTX-227ENST00000485479 MRAP2Q96G30 205 aa8.03□□□□□ -1.12
APTX-227ENST00000485479 Q9HAA7 133 aa8.03□□□□□ -1.12
APTX-227ENST00000485479 A0A087WWC5 75 aa8.02□□□□□ -1.12
APTX-227ENST00000485479 TGIF2-C20orf24A0A0A6YYL0 155 aa8.02□□□□□ -1.12
APTX-227ENST00000485479 A0A1B0GW15 77 aa8.02□□□□□ -1.12
APTX-227ENST00000485479 NPYP01303 97 aa8.02□□□□□ -1.12
APTX-227ENST00000485479 C1orf134Q5TEV5 83 aa8.02□□□□□ -1.12
APTX-227ENST00000485479 NIT1Q86X76 327 aa8.02□□□□□ -1.12
APTX-227ENST00000485479 IMMP2LQ96T52 175 aa8.02□□□□□ -1.12
APTX-227ENST00000485479 ST20Q9HBF5 79 aa8.02□□□□□ -1.12
APTX-227ENST00000485479 TMA7Q9Y2S6 64 aaKnown RBP8.02□□□□□ -1.12
APTX-227ENST00000485479 S100PP25815 95 aa8.02□□□□□ -1.13
APTX-227ENST00000485479 LINC01556Q5JQF7 62 aa8.02□□□□□ -1.13
APTX-227ENST00000485479 CLPSL2Q6UWE3 100 aa8.02□□□□□ -1.13
APTX-227ENST00000485479 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.02□□□□□ -1.13
APTX-227ENST00000485479 TMEM70Q9BUB7 260 aa8.02□□□□□ -1.13
APTX-227ENST00000485479 TMEM242Q9NWH2 141 aa8.02□□□□□ -1.13
APTX-227ENST00000485479 TRBV25-1A0A075B6N4 114 aa8.01□□□□□ -1.13
APTX-227ENST00000485479 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.01□□□□□ -1.13
APTX-227ENST00000485479 IGKV2-29A2NJV5 120 aaPredicted RBP8.01□□□□□ -1.13
APTX-227ENST00000485479 S100A8P05109 93 aa8.01□□□□□ -1.13
APTX-227ENST00000485479 COTL1Q14019 142 aa8.01□□□□□ -1.13
APTX-227ENST00000485479 TTC32Q5I0X7 151 aa8.01□□□□□ -1.13
APTX-227ENST00000485479 TMEM136Q6ZRR5 245 aa8.01□□□□□ -1.13
APTX-227ENST00000485479 CBLN2Q8IUK8 224 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms