RNA–Protein interactions for RNA: ENST00000484979.5

PCDH17-202, Transcript of protocadherin 17, humanhuman

TSL 1 (best)

Gene PCDH17, Length 4,471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17-202ENST00000484979 RPL18AQ02543 176 aaKnown RBP12.17□□□□□ -0.46
PCDH17-202ENST00000484979 EBI3Q14213 229 aa12.17□□□□□ -0.46
PCDH17-202ENST00000484979 DEFB125Q8N687 156 aa12.17□□□□□ -0.46
PCDH17-202ENST00000484979 TRBV6-1A0A0K0K1D8 114 aa12.17□□□□□ -0.46
PCDH17-202ENST00000484979 CEND1Q8N111 149 aa12.17□□□□□ -0.46
PCDH17-202ENST00000484979 PPDPFLQ8WWR9 84 aa12.17□□□□□ -0.46
PCDH17-202ENST00000484979 VSIG2Q96IQ7 327 aa12.17□□□□□ -0.46
PCDH17-202ENST00000484979 LINC01548A6NM66 108 aa12.17□□□□□ -0.46
PCDH17-202ENST00000484979 CTRLP40313 264 aa12.17□□□□□ -0.46
PCDH17-202ENST00000484979 COA6Q5JTJ3 125 aaKnown RBP12.17□□□□□ -0.46
PCDH17-202ENST00000484979 KLK12Q9UKR0 248 aa12.17□□□□□ -0.46
PCDH17-202ENST00000484979 DENND4AQ7Z401 1863 aa12.16□□□□□ -0.46
PCDH17-202ENST00000484979 LGALS9O00182 355 aa12.16□□□□□ -0.46
PCDH17-202ENST00000484979 P0C879 139 aa12.16□□□□□ -0.46
PCDH17-202ENST00000484979 TMEM131Q92545 1883 aa12.16□□□□□ -0.46
PCDH17-202ENST00000484979 CFC1BP0CG36 223 aa12.15□□□□□ -0.46
PCDH17-202ENST00000484979 CFC1P0CG37 223 aa12.15□□□□□ -0.46
PCDH17-202ENST00000484979 TIRAPP58753 221 aa12.15□□□□□ -0.46
PCDH17-202ENST00000484979 C11orf71Q6IPW1 123 aa12.15□□□□□ -0.46
PCDH17-202ENST00000484979 IGLL5B9A064 214 aa12.15□□□□□ -0.46
PCDH17-202ENST00000484979 LINC01545Q5VT33 79 aa12.15□□□□□ -0.47
PCDH17-202ENST00000484979 EPG5Q9HCE0 2579 aa12.14□□□□□ -0.47
PCDH17-202ENST00000484979 Q6ZSV7 163 aa12.14□□□□□ -0.47
PCDH17-202ENST00000484979 TIMM17AQ99595 171 aa12.14□□□□□ -0.47
PCDH17-202ENST00000484979 SMIM9A6NGZ8 99 aa12.14□□□□□ -0.47
PCDH17-202ENST00000484979 K7EQG2 157 aa12.14□□□□□ -0.47
PCDH17-202ENST00000484979 Q6ZVH6 145 aa12.14□□□□□ -0.47
PCDH17-202ENST00000484979 C11orf45Q8TAV5 145 aa12.14□□□□□ -0.47
PCDH17-202ENST00000484979 CARD19Q96LW7 228 aa12.14□□□□□ -0.47
PCDH17-202ENST00000484979 SND1-IT1Q9HBX3 110 aa12.14□□□□□ -0.47
PCDH17-202ENST00000484979 ARHGAP21Q5T5U3 1957 aa12.14□□□□□ -0.47
PCDH17-202ENST00000484979 CXCL5P42830 114 aa12.14□□□□□ -0.47
PCDH17-202ENST00000484979 MDFICQ9P1T7 246 aa12.14□□□□□ -0.47
PCDH17-202ENST00000484979 IGKV1D-37A0A075B6S9 117 aa12.13□□□□□ -0.47
PCDH17-202ENST00000484979 DEFB114Q30KQ6 69 aa12.13□□□□□ -0.47
PCDH17-202ENST00000484979 COL4A3Q01955 1670 aa12.13□□□□□ -0.47
PCDH17-202ENST00000484979 GTSF1Q8WW33 167 aa12.13□□□□□ -0.47
PCDH17-202ENST00000484979 F8W1H4 67 aa12.13□□□□□ -0.47
PCDH17-202ENST00000484979 GTSF1LQ9H1H1 148 aa12.12□□□□□ -0.47
PCDH17-202ENST00000484979 H0YGX0 51 aa12.12□□□□□ -0.47
PCDH17-202ENST00000484979 SPAG11BQ08648 103 aa12.12□□□□□ -0.47
PCDH17-202ENST00000484979 COX7B2Q8TF08 81 aa12.12□□□□□ -0.47
PCDH17-202ENST00000484979 C12orf74Q32Q52 190 aa12.12□□□□□ -0.47
PCDH17-202ENST00000484979 ODF3Q96PU9 254 aa12.12□□□□□ -0.47
PCDH17-202ENST00000484979 RPL39P62891 51 aaKnown RBP12.11□□□□□ -0.47
PCDH17-202ENST00000484979 PCP2Q8IVA1 136 aa12.11□□□□□ -0.47
PCDH17-202ENST00000484979 OPRPNQ99935 248 aaPredicted RBP12.1□□□□□ -0.47
PCDH17-202ENST00000484979 FUSP35637 526 aaKnown RBP eCLIP12.09□□□□□ -0.47
PCDH17-202ENST00000484979 BRWD1-AS2P59051 145 aa12.09□□□□□ -0.47
PCDH17-202ENST00000484979 C20orf203Q8NBC4 194 aa12.09□□□□□ -0.47
PCDH17-202ENST00000484979 PLA2G2EQ9NZK7 142 aa12.09□□□□□ -0.47
PCDH17-202ENST00000484979 ORMDL1Q9P0S3 153 aa12.09□□□□□ -0.47
PCDH17-202ENST00000484979 ARHGAP32A7KAX9 2087 aa12.09□□□□□ -0.47
PCDH17-202ENST00000484979 A0A1W2PPM0 123 aa12.09□□□□□ -0.47
PCDH17-202ENST00000484979 LYRM9A8MSI8 78 aa12.09□□□□□ -0.47
PCDH17-202ENST00000484979 DEFB105AQ8NG35 78 aa12.08□□□□□ -0.48
PCDH17-202ENST00000484979 FLNBO75369 2602 aaKnown RBP12.08□□□□□ -0.48
PCDH17-202ENST00000484979 TRAV12-1A0A0B4J245 112 aa12.08□□□□□ -0.48
PCDH17-202ENST00000484979 TINCRA0A1B0GVN0 87 aa12.08□□□□□ -0.48
PCDH17-202ENST00000484979 hADV29S1A0JD25 119 aa12.08□□□□□ -0.48
PCDH17-202ENST00000484979 FAM222AQ5U5X8 452 aa12.08□□□□□ -0.48
PCDH17-202ENST00000484979 C19orf71A6NCJ1 209 aa12.07□□□□□ -0.48
PCDH17-202ENST00000484979 CITED1Q99966 193 aa12.07□□□□□ -0.48
PCDH17-202ENST00000484979 LY6LH3BQJ8 138 aa12.07□□□□□ -0.48
PCDH17-202ENST00000484979 C10orf142B7Z368 130 aa12.07□□□□□ -0.48
PCDH17-202ENST00000484979 LY6G6DO95868 133 aa12.07□□□□□ -0.48
PCDH17-202ENST00000484979 H3BMG7 143 aa12.07□□□□□ -0.48
PCDH17-202ENST00000484979 CCL25O15444 150 aa12.07□□□□□ -0.48
PCDH17-202ENST00000484979 SPATA25Q9BR10 227 aa12.07□□□□□ -0.48
PCDH17-202ENST00000484979 SPANXDQ9BXN6 97 aa12.07□□□□□ -0.48
PCDH17-202ENST00000484979 K7EP34 96 aa12.06□□□□□ -0.48
PCDH17-202ENST00000484979 C14orf177Q52M58 125 aa12.06□□□□□ -0.48
PCDH17-202ENST00000484979 C11orf1Q9H5F2 150 aa12.06□□□□□ -0.48
PCDH17-202ENST00000484979 HILS1P60008 231 aa12.06□□□□□ -0.48
PCDH17-202ENST00000484979 Q6ZTI0 123 aa12.06□□□□□ -0.48
PCDH17-202ENST00000484979 BAALC-AS2P0C853 105 aa12.06□□□□□ -0.48
PCDH17-202ENST00000484979 TRAV26-1A0A087WT03 109 aa12.05□□□□□ -0.48
PCDH17-202ENST00000484979 K7ERJ3 54 aa12.05□□□□□ -0.48
PCDH17-202ENST00000484979 CRYGBP07316 175 aa12.05□□□□□ -0.48
PCDH17-202ENST00000484979 PSMG3-AS1Q96PY0 264 aa12.05□□□□□ -0.48
PCDH17-202ENST00000484979 K7EP13 123 aa12.05□□□□□ -0.48
PCDH17-202ENST00000484979 A4D1N5 150 aa12.04□□□□□ -0.48
PCDH17-202ENST00000484979 ANKRD39Q53RE8 183 aa12.04□□□□□ -0.48
PCDH17-202ENST00000484979 Q6ZPA2 131 aa12.04□□□□□ -0.48
PCDH17-202ENST00000484979 UBE2AP49459 152 aa12.04□□□□□ -0.48
PCDH17-202ENST00000484979 LINC01006Q8NI28 216 aa12.04□□□□□ -0.48
PCDH17-202ENST00000484979 NTN5Q8WTR8 489 aaPredicted RBP12.04□□□□□ -0.48
PCDH17-202ENST00000484979 TOMM6Q96B49 74 aa12.04□□□□□ -0.48
PCDH17-202ENST00000484979 IGHV4-4A0A075B6R2 117 aa12.04□□□□□ -0.48
PCDH17-202ENST00000484979 OBSL1O75147 1896 aa12.04□□□□□ -0.48
PCDH17-202ENST00000484979 TNRC6AQ8NDV7 1962 aaKnown RBP12.04□□□□□ -0.48
PCDH17-202ENST00000484979 DEFB131BA0A096LNP1 70 aa12.03□□□□□ -0.48
PCDH17-202ENST00000484979 F8P00451 2351 aa12.03□□□□□ -0.48
PCDH17-202ENST00000484979 MIFP14174 115 aa12.03□□□□□ -0.48
PCDH17-202ENST00000484979 MAJINQ3KP22 176 aa12.03□□□□□ -0.48
PCDH17-202ENST00000484979 ALPK3Q96L96 1907 aa12.03□□□□□ -0.48
PCDH17-202ENST00000484979 C4orf48Q5BLP8 95 aa12.03□□□□□ -0.48
PCDH17-202ENST00000484979 LINC00173Q6ZV60 143 aa12.02□□□□□ -0.48
PCDH17-202ENST00000484979 BAALCQ8WXS3 180 aa12.02□□□□□ -0.48
PCDH17-202ENST00000484979 RNF183Q96D59 192 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms