RNA–Protein interactions for RNA: ENST00000484746.1

ATP2B4-207, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 1 (best)

Gene ATP2B4, Length 4,697 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-207ENST00000484746 Q6ZSV7 163 aa4.28□□□□□ -1.72
ATP2B4-207ENST00000484746 CITED2Q99967 270 aaPredicted RBP4.28□□□□□ -1.72
ATP2B4-207ENST00000484746 ZNF702PQ9H963 129 aa4.28□□□□□ -1.72
ATP2B4-207ENST00000484746 A4D1N5 150 aa4.28□□□□□ -1.72
ATP2B4-207ENST00000484746 FOXI1Q12951 378 aa4.28□□□□□ -1.72
ATP2B4-207ENST00000484746 CHAC1Q9BUX1 264 aa4.28□□□□□ -1.72
ATP2B4-207ENST00000484746 CCDC179H3BU77 68 aa4.28□□□□□ -1.72
ATP2B4-207ENST00000484746 I3L3M4 83 aa4.28□□□□□ -1.72
ATP2B4-207ENST00000484746 K7EQG2 157 aa4.28□□□□□ -1.72
ATP2B4-207ENST00000484746 XGP55808 180 aa4.28□□□□□ -1.72
ATP2B4-207ENST00000484746 MEIG1Q5JSS6 88 aa4.28□□□□□ -1.72
ATP2B4-207ENST00000484746 ZNF493Q6ZR52 646 aa4.28□□□□□ -1.72
ATP2B4-207ENST00000484746 TMEM61Q8N0U2 210 aa4.28□□□□□ -1.72
ATP2B4-207ENST00000484746 DLX4Q92988 240 aaPredicted RBP4.28□□□□□ -1.72
ATP2B4-207ENST00000484746 MSRB1Q9NZV6 116 aa4.28□□□□□ -1.72
ATP2B4-207ENST00000484746 ADARB2-AS1A8MUL3 147 aa4.28□□□□□ -1.72
ATP2B4-207ENST00000484746 ZNF80P51504 273 aaPredicted RBP4.28□□□□□ -1.72
ATP2B4-207ENST00000484746 LGALS9BQ3B8N2 356 aa4.28□□□□□ -1.72
ATP2B4-207ENST00000484746 LGALS9CQ6DKI2 356 aa4.28□□□□□ -1.72
ATP2B4-207ENST00000484746 APRG1Q8IVJ8 170 aa4.28□□□□□ -1.72
ATP2B4-207ENST00000484746 TMEM141Q96I45 108 aa4.28□□□□□ -1.72
ATP2B4-207ENST00000484746 CHCHD5Q9BSY4 110 aa4.28□□□□□ -1.72
ATP2B4-207ENST00000484746 ZNF462Q96JM2 2506 aa4.28□□□□□ -1.72
ATP2B4-207ENST00000484746 A0A096LNJ9 63 aa4.27□□□□□ -1.73
ATP2B4-207ENST00000484746 GAS8-AS1O95177 125 aa4.27□□□□□ -1.73
ATP2B4-207ENST00000484746 GATA1P15976 413 aaPredicted RBP4.27□□□□□ -1.73
ATP2B4-207ENST00000484746 DEFB1P60022 68 aa4.27□□□□□ -1.73
ATP2B4-207ENST00000484746 C9orf66Q5T8R8 295 aa4.27□□□□□ -1.73
ATP2B4-207ENST00000484746 Q6ZS46 218 aa4.27□□□□□ -1.73
ATP2B4-207ENST00000484746 ODF3Q96PU9 254 aa4.27□□□□□ -1.73
ATP2B4-207ENST00000484746 ZNF580Q9UK33 172 aa4.27□□□□□ -1.73
ATP2B4-207ENST00000484746 CUBNO60494 3623 aa4.27□□□□□ -1.73
ATP2B4-207ENST00000484746 IFITM1P13164 125 aa4.27□□□□□ -1.73
ATP2B4-207ENST00000484746 APOC4P55056 127 aa4.27□□□□□ -1.73
ATP2B4-207ENST00000484746 PIFOQ8TCI5 191 aa4.27□□□□□ -1.73
ATP2B4-207ENST00000484746 PPDPFQ9H3Y8 114 aa4.27□□□□□ -1.73
ATP2B4-207ENST00000484746 TP53TG1Q9Y2A0 90 aa4.27□□□□□ -1.73
ATP2B4-207ENST00000484746 U3KQE9 123 aa4.27□□□□□ -1.73
ATP2B4-207ENST00000484746 RELNP78509 3460 aa4.27□□□□□ -1.73
ATP2B4-207ENST00000484746 LRBAP50851 2863 aa4.27□□□□□ -1.73
ATP2B4-207ENST00000484746 DOPEY1Q5JWR5 2465 aa4.27□□□□□ -1.73
ATP2B4-207ENST00000484746 IGLV2-11P01706 119 aa4.27□□□□□ -1.73
ATP2B4-207ENST00000484746 MORN3Q6PF18 240 aaPredicted RBP4.27□□□□□ -1.73
ATP2B4-207ENST00000484746 C10orf99Q6UWK7 81 aa4.27□□□□□ -1.73
ATP2B4-207ENST00000484746 USP9YO00507 2555 aaPredicted RBP4.27□□□□□ -1.73
ATP2B4-207ENST00000484746 TRBV25-1A0A075B6N4 114 aa4.27□□□□□ -1.73
ATP2B4-207ENST00000484746 TRAV8-2A0A0B4J237 113 aa4.27□□□□□ -1.73
ATP2B4-207ENST00000484746 ZNF815PA8K554 130 aa4.27□□□□□ -1.73
ATP2B4-207ENST00000484746 PHLDA1Q8WV24 401 aaPredicted RBP4.27□□□□□ -1.73
ATP2B4-207ENST00000484746 TM2D2Q9BX73 214 aa4.27□□□□□ -1.73
ATP2B4-207ENST00000484746 WNK1Q9H4A3 2382 aa4.26□□□□□ -1.73
ATP2B4-207ENST00000484746 IGLC6P0CF74 106 aa4.26□□□□□ -1.73
ATP2B4-207ENST00000484746 DEFB130BP0DP73 79 aa4.26□□□□□ -1.73
ATP2B4-207ENST00000484746 DEFB130AP0DP74 79 aa4.26□□□□□ -1.73
ATP2B4-207ENST00000484746 PLEKHB2Q96CS7 222 aa4.26□□□□□ -1.73
ATP2B4-207ENST00000484746 USP9XQ93008 2570 aaPredicted RBP4.26□□□□□ -1.73
ATP2B4-207ENST00000484746 TRAV2A0A0B4J234 112 aa4.26□□□□□ -1.73
ATP2B4-207ENST00000484746 IGKV3D-20A0A0C4DH25 116 aa4.26□□□□□ -1.73
ATP2B4-207ENST00000484746 IGHV3-16A0A0C4DH30 117 aa4.26□□□□□ -1.73
ATP2B4-207ENST00000484746 F8W735 103 aaPredicted RBP4.26□□□□□ -1.73
ATP2B4-207ENST00000484746 MRPS12O15235 138 aaKnown RBP4.26□□□□□ -1.73
ATP2B4-207ENST00000484746 SPRY2O43597 315 aa4.26□□□□□ -1.73
ATP2B4-207ENST00000484746 COX6CP09669 75 aa4.26□□□□□ -1.73
ATP2B4-207ENST00000484746 C20orf173Q96LM9 149 aa4.26□□□□□ -1.73
ATP2B4-207ENST00000484746 ZFYVE26Q68DK2 2539 aa4.26□□□□□ -1.73
ATP2B4-207ENST00000484746 IGLL5B9A064 214 aa4.26□□□□□ -1.73
ATP2B4-207ENST00000484746 HLA-DRB4P13762 266 aa4.26□□□□□ -1.73
ATP2B4-207ENST00000484746 PMVKQ15126 192 aa4.26□□□□□ -1.73
ATP2B4-207ENST00000484746 HLA-DRB4X5D2U9 266 aa4.26□□□□□ -1.73
ATP2B4-207ENST00000484746 RNASE1P07998 156 aaKnown RBP4.25□□□□□ -1.73
ATP2B4-207ENST00000484746 CRIP1P50238 77 aa4.25□□□□□ -1.73
ATP2B4-207ENST00000484746 NDUFV3P56181 108 aaKnown RBP4.25□□□□□ -1.73
ATP2B4-207ENST00000484746 Q8N1Y9 231 aa4.25□□□□□ -1.73
ATP2B4-207ENST00000484746 COL12A1Q99715 3063 aa4.25□□□□□ -1.73
ATP2B4-207ENST00000484746 LRRK2Q5S007 2527 aa4.25□□□□□ -1.73
ATP2B4-207ENST00000484746 RHOHQ15669 191 aa4.25□□□□□ -1.73
ATP2B4-207ENST00000484746 DEFB114Q30KQ6 69 aa4.25□□□□□ -1.73
ATP2B4-207ENST00000484746 CDIP1Q9H305 208 aa4.25□□□□□ -1.73
ATP2B4-207ENST00000484746 MAP6D1Q9H9H5 199 aa4.25□□□□□ -1.73
ATP2B4-207ENST00000484746 SONP18583 2426 aaKnown RBP4.25□□□□□ -1.73
ATP2B4-207ENST00000484746 H7C2G1 150 aa4.25□□□□□ -1.73
ATP2B4-207ENST00000484746 NDUFA11Q86Y39 141 aa4.25□□□□□ -1.73
ATP2B4-207ENST00000484746 MAPKAPK5-AS1Q8N8E1 139 aa4.25□□□□□ -1.73
ATP2B4-207ENST00000484746 ZNRF2Q8NHG8 242 aa4.25□□□□□ -1.73
ATP2B4-207ENST00000484746 TOMM7Q9P0U1 55 aa4.25□□□□□ -1.73
ATP2B4-207ENST00000484746 NACAE9PAV3 2078 aa4.25□□□□□ -1.73
ATP2B4-207ENST00000484746 CFHR3Q02985 330 aa4.25□□□□□ -1.73
ATP2B4-207ENST00000484746 SUMO4Q6EEV6 95 aa4.25□□□□□ -1.73
ATP2B4-207ENST00000484746 ZFAND2AQ8N6M9 145 aa4.25□□□□□ -1.73
ATP2B4-207ENST00000484746 MYO9AB2RTY4 2548 aa4.25□□□□□ -1.73
ATP2B4-207ENST00000484746 F8VRH5 84 aa4.24□□□□□ -1.73
ATP2B4-207ENST00000484746 RPL13AP40429 203 aaKnown RBP4.24□□□□□ -1.73
ATP2B4-207ENST00000484746 PPDPFLQ8WWR9 84 aa4.24□□□□□ -1.73
ATP2B4-207ENST00000484746 MRPL35Q9NZE8 188 aaKnown RBP4.24□□□□□ -1.73
ATP2B4-207ENST00000484746 CSDC2Q9Y534 153 aaKnown RBP4.24□□□□□ -1.73
ATP2B4-207ENST00000484746 LY6G6DO95868 133 aa4.24□□□□□ -1.73
ATP2B4-207ENST00000484746 DAD1P61803 113 aa4.24□□□□□ -1.73
ATP2B4-207ENST00000484746 C12orf74Q32Q52 190 aa4.24□□□□□ -1.73
ATP2B4-207ENST00000484746 CEND1Q8N111 149 aa4.24□□□□□ -1.73
ATP2B4-207ENST00000484746 SPANXA1Q9NS26 97 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms