RNA–Protein interactions for RNA: ENST00000484729.2

HLA-DQB1-208, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-208ENST00000484729 CENPWQ5EE01 88 aa10.08□□□□□ -0.8
HLA-DQB1-208ENST00000484729 NIT1Q86X76 327 aa10.08□□□□□ -0.8
HLA-DQB1-208ENST00000484729 BAGE2Q86Y30 109 aa10.08□□□□□ -0.8
HLA-DQB1-208ENST00000484729 SFRP2Q96HF1 295 aa10.08□□□□□ -0.8
HLA-DQB1-208ENST00000484729 FAT3Q8TDW7 4589 aa10.07□□□□□ -0.8
HLA-DQB1-208ENST00000484729 GNG4P50150 75 aa10.07□□□□□ -0.8
HLA-DQB1-208ENST00000484729 ZNF674Q2M3X9 581 aa10.07□□□□□ -0.8
HLA-DQB1-208ENST00000484729 COX8CQ7Z4L0 72 aa10.07□□□□□ -0.8
HLA-DQB1-208ENST00000484729 ZFP82Q8N141 532 aa10.07□□□□□ -0.8
HLA-DQB1-208ENST00000484729 KLK12Q9UKR0 248 aa10.07□□□□□ -0.8
HLA-DQB1-208ENST00000484729 A0A087WX48 190 aa10.06□□□□□ -0.8
HLA-DQB1-208ENST00000484729 RAB19A4D1S5 217 aa10.06□□□□□ -0.8
HLA-DQB1-208ENST00000484729 TMEM250H0YL14 139 aa10.06□□□□□ -0.8
HLA-DQB1-208ENST00000484729 RPL36AP83881 106 aaKnown RBP10.06□□□□□ -0.8
HLA-DQB1-208ENST00000484729 LINC01559Q495D7 138 aa10.06□□□□□ -0.8
HLA-DQB1-208ENST00000484729 PRR27Q6MZM9 219 aa10.06□□□□□ -0.8
HLA-DQB1-208ENST00000484729 KCNIP4Q6PIL6 250 aa10.06□□□□□ -0.8
HLA-DQB1-208ENST00000484729 RPL36ALQ969Q0 106 aaKnown RBP10.06□□□□□ -0.8
HLA-DQB1-208ENST00000484729 UBE2WQ96B02 151 aa10.06□□□□□ -0.8
HLA-DQB1-208ENST00000484729 DNAJC30Q96LL9 226 aa10.06□□□□□ -0.8
HLA-DQB1-208ENST00000484729 TRBV10-1A0A0K0K1A3 114 aa10.04□□□□□ -0.8
HLA-DQB1-208ENST00000484729 IFITM2Q01629 132 aa10.04□□□□□ -0.8
HLA-DQB1-208ENST00000484729 Q8N976 141 aa10.04□□□□□ -0.8
HLA-DQB1-208ENST00000484729 UBE2D3P61077 147 aa10.03□□□□□ -0.8
HLA-DQB1-208ENST00000484729 UBE2D2P62837 147 aa10.03□□□□□ -0.8
HLA-DQB1-208ENST00000484729 PEA15Q15121 130 aa10.03□□□□□ -0.8
HLA-DQB1-208ENST00000484729 ELOBQ15370 118 aa10.03□□□□□ -0.8
HLA-DQB1-208ENST00000484729 SMIM12Q96EX1 92 aa10.03□□□□□ -0.8
HLA-DQB1-208ENST00000484729 CHCHD7Q9BUK0 85 aa10.03□□□□□ -0.8
HLA-DQB1-208ENST00000484729 TRBV20OR9-2A0A075B6H5 130 aa10.02□□□□□ -0.81
HLA-DQB1-208ENST00000484729 TRBV7-3A0A075B6L6 115 aa10.02□□□□□ -0.81
HLA-DQB1-208ENST00000484729 NDUFS6O75380 124 aaKnown RBP10.02□□□□□ -0.81
HLA-DQB1-208ENST00000484729 ZNF56Q15929 161 aa10.02□□□□□ -0.81
HLA-DQB1-208ENST00000484729 SMIM7Q9BQ49 75 aa10.02□□□□□ -0.81
HLA-DQB1-208ENST00000484729 CHAC1Q9BUX1 264 aa10.02□□□□□ -0.81
HLA-DQB1-208ENST00000484729 MLST8Q9BVC4 326 aa10.02□□□□□ -0.81
HLA-DQB1-208ENST00000484729 BIN3Q9NQY0 253 aa10.02□□□□□ -0.81
HLA-DQB1-208ENST00000484729 TMEM262E9PQX1 116 aa10.01□□□□□ -0.81
HLA-DQB1-208ENST00000484729 SRP19P09132 144 aaKnown RBP10.01□□□□□ -0.81
HLA-DQB1-208ENST00000484729 RPL19P84098 196 aaKnown RBP10.01□□□□□ -0.81
HLA-DQB1-208ENST00000484729 CLLU1Q5K131 121 aa10.01□□□□□ -0.81
HLA-DQB1-208ENST00000484729 OR10AG1Q8NH19 301 aa10.01□□□□□ -0.81
HLA-DQB1-208ENST00000484729 CIRBP-AS1Q8TBR5 109 aa10.01□□□□□ -0.81
HLA-DQB1-208ENST00000484729 DAZAP1Q96EP5 407 aaKnown RBP10.01□□□□□ -0.81
HLA-DQB1-208ENST00000484729 IGLV2-8P01709 118 aa10□□□□□ -0.81
HLA-DQB1-208ENST00000484729 CRPP02741 224 aa10□□□□□ -0.81
HLA-DQB1-208ENST00000484729 Q0VG73 95 aa10□□□□□ -0.81
HLA-DQB1-208ENST00000484729 C1orf43Q9BWL3 253 aa10□□□□□ -0.81
HLA-DQB1-208ENST00000484729 TRBV6-8A0A0A6YYG3 113 aa9.99□□□□□ -0.81
HLA-DQB1-208ENST00000484729 ZNF727A8MUV8 499 aa9.99□□□□□ -0.81
HLA-DQB1-208ENST00000484729 RAB4BP61018 213 aa9.99□□□□□ -0.81
HLA-DQB1-208ENST00000484729 SRSF3P84103 164 aaKnown RBP9.99□□□□□ -0.81
HLA-DQB1-208ENST00000484729 ATRAIDQ6UW56 229 aa9.99□□□□□ -0.81
HLA-DQB1-208ENST00000484729 C15orf54Q8N8G6 183 aa9.99□□□□□ -0.81
HLA-DQB1-208ENST00000484729 NEXN-AS1Q8NBZ9 246 aa9.99□□□□□ -0.81
HLA-DQB1-208ENST00000484729 OR10G8Q8NGN5 311 aa9.99□□□□□ -0.81
HLA-DQB1-208ENST00000484729 RNF213Q63HN8 5207 aa9.98□□□□□ -0.81
HLA-DQB1-208ENST00000484729 MUC21A0A0G2JKD1 596 aa9.98□□□□□ -0.81
HLA-DQB1-208ENST00000484729 MUC21A0A140T8X8 626 aa9.98□□□□□ -0.81
HLA-DQB1-208ENST00000484729 CXCL1P09341 107 aa9.98□□□□□ -0.81
HLA-DQB1-208ENST00000484729 HNRNPA3P51991 378 aaKnown RBP9.98□□□□□ -0.81
HLA-DQB1-208ENST00000484729 SPANXN1Q5VSR9 72 aa9.98□□□□□ -0.81
HLA-DQB1-208ENST00000484729 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.98□□□□□ -0.81
HLA-DQB1-208ENST00000484729 SMDT1Q9H4I9 107 aa9.98□□□□□ -0.81
HLA-DQB1-208ENST00000484729 F5H697 171 aa9.97□□□□□ -0.81
HLA-DQB1-208ENST00000484729 P01737 135 aa9.97□□□□□ -0.81
HLA-DQB1-208ENST00000484729 ANGP03950 147 aaKnown RBP9.97□□□□□ -0.81
HLA-DQB1-208ENST00000484729 C14orf177Q52M58 125 aa9.97□□□□□ -0.81
HLA-DQB1-208ENST00000484729 MPV17L2Q567V2 206 aa9.97□□□□□ -0.81
HLA-DQB1-208ENST00000484729 OCC1Q8TAD7 63 aa9.97□□□□□ -0.81
HLA-DQB1-208ENST00000484729 CHCHD5Q9BSY4 110 aa9.97□□□□□ -0.81
HLA-DQB1-208ENST00000484729 C9JQL5 133 aa9.96□□□□□ -0.82
HLA-DQB1-208ENST00000484729 K7EN84 100 aa9.96□□□□□ -0.82
HLA-DQB1-208ENST00000484729 HLA-DQA1P01909 254 aa9.96□□□□□ -0.82
HLA-DQB1-208ENST00000484729 SSTP61278 116 aa9.96□□□□□ -0.82
HLA-DQB1-208ENST00000484729 FAM74A3Q4VXF1 159 aa9.96□□□□□ -0.82
HLA-DQB1-208ENST00000484729 ENHOQ6UWT2 76 aa9.96□□□□□ -0.82
HLA-DQB1-208ENST00000484729 OR2D3Q8NGH3 330 aa9.96□□□□□ -0.82
HLA-DQB1-208ENST00000484729 C19orf71A6NCJ1 209 aa9.95□□□□□ -0.82
HLA-DQB1-208ENST00000484729 SNAI2O43623 268 aa9.95□□□□□ -0.82
HLA-DQB1-208ENST00000484729 RNASE7Q9H1E1 156 aaKnown RBP9.95□□□□□ -0.82
HLA-DQB1-208ENST00000484729 XKRY2A2RUG3 117 aa9.94□□□□□ -0.82
HLA-DQB1-208ENST00000484729 OR5AL1P0C617 328 aa9.94□□□□□ -0.82
HLA-DQB1-208ENST00000484729 SMIM17P0DL12 118 aa9.94□□□□□ -0.82
HLA-DQB1-208ENST00000484729 MT1HL1P0DM35 61 aa9.94□□□□□ -0.82
HLA-DQB1-208ENST00000484729 RPS20P60866 119 aaKnown RBP9.94□□□□□ -0.82
HLA-DQB1-208ENST00000484729 RPL37AP61513 92 aaKnown RBP9.94□□□□□ -0.82
HLA-DQB1-208ENST00000484729 PKIAP61925 76 aa9.94□□□□□ -0.82
HLA-DQB1-208ENST00000484729 TMEM241Q24JQ0 296 aa9.94□□□□□ -0.82
HLA-DQB1-208ENST00000484729 AP1S3Q96PC3 154 aa9.94□□□□□ -0.82
HLA-DQB1-208ENST00000484729 SSBP4Q9BWG4 385 aaPredicted RBP9.94□□□□□ -0.82
HLA-DQB1-208ENST00000484729 RPP21Q9H633 154 aaKnown RBP9.94□□□□□ -0.82
HLA-DQB1-208ENST00000484729 USP17L23D6RBM5 183 aa9.93□□□□□ -0.82
HLA-DQB1-208ENST00000484729 ADIRFQ15847 76 aa9.93□□□□□ -0.82
HLA-DQB1-208ENST00000484729 CLPSL2Q6UWE3 100 aa9.93□□□□□ -0.82
HLA-DQB1-208ENST00000484729 LINC01551Q86U37 167 aa9.93□□□□□ -0.82
HLA-DQB1-208ENST00000484729 NUDT10Q8NFP7 164 aa9.93□□□□□ -0.82
HLA-DQB1-208ENST00000484729 NUDT11Q96G61 164 aa9.93□□□□□ -0.82
HLA-DQB1-208ENST00000484729 TPPP3Q9BW30 176 aa9.93□□□□□ -0.82
HLA-DQB1-208ENST00000484729 NAT8Q9UHE5 227 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms