RNA–Protein interactions for RNA: ENST00000484378.1

HLA-C-207, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 862 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-207ENST00000484378 RAB5CP51148 216 aa18.67■□□□□ 0.58
HLA-C-207ENST00000484378 Q0VG73 95 aa18.67■□□□□ 0.58
HLA-C-207ENST00000484378 CENPWQ5EE01 88 aa18.67■□□□□ 0.58
HLA-C-207ENST00000484378 FLG2Q5D862 2391 aaPredicted RBP18.67■□□□□ 0.58
HLA-C-207ENST00000484378 TRAV1-1A0A0B4J248 108 aa18.66■□□□□ 0.58
HLA-C-207ENST00000484378 TEX46H3BTG2 121 aa18.66■□□□□ 0.58
HLA-C-207ENST00000484378 EIF5AL1Q6IS14 154 aaKnown RBP18.66■□□□□ 0.58
HLA-C-207ENST00000484378 ATRAIDQ6UW56 229 aa18.66■□□□□ 0.58
HLA-C-207ENST00000484378 CRPP02741 224 aa18.65■□□□□ 0.58
HLA-C-207ENST00000484378 LINC01620Q4KN68 170 aa18.65■□□□□ 0.58
HLA-C-207ENST00000484378 CHCHD5Q9BSY4 110 aa18.65■□□□□ 0.58
HLA-C-207ENST00000484378 TPPP3Q9BW30 176 aa18.65■□□□□ 0.58
HLA-C-207ENST00000484378 C1orf43Q9BWL3 253 aa18.65■□□□□ 0.58
HLA-C-207ENST00000484378 MPV17L2Q567V2 206 aa18.64■□□□□ 0.57
HLA-C-207ENST00000484378 C15orf54Q8N8G6 183 aa18.64■□□□□ 0.57
HLA-C-207ENST00000484378 DAZAP1Q96EP5 407 aaKnown RBP18.64■□□□□ 0.57
HLA-C-207ENST00000484378 PKIAP61925 76 aa18.63■□□□□ 0.57
HLA-C-207ENST00000484378 KIF25-AS1Q9Y6Z4 181 aa18.63■□□□□ 0.57
HLA-C-207ENST00000484378 ANGP03950 147 aaKnown RBP18.62■□□□□ 0.57
HLA-C-207ENST00000484378 GZMBP10144 247 aa18.62■□□□□ 0.57
HLA-C-207ENST00000484378 OR2D3Q8NGH3 330 aa18.62■□□□□ 0.57
HLA-C-207ENST00000484378 TMEM97Q5BJF2 176 aa18.61■□□□□ 0.57
HLA-C-207ENST00000484378 FER1L6-AS1Q8NA97 138 aa18.61■□□□□ 0.57
HLA-C-207ENST00000484378 IGLV2-8P01709 118 aa18.6■□□□□ 0.57
HLA-C-207ENST00000484378 GNG4P50150 75 aa18.6■□□□□ 0.57
HLA-C-207ENST00000484378 RPS20P60866 119 aaKnown RBP18.6■□□□□ 0.57
HLA-C-207ENST00000484378 ENHOQ6UWT2 76 aa18.6■□□□□ 0.57
HLA-C-207ENST00000484378 VAX2Q9UIW0 290 aa18.6■□□□□ 0.57
HLA-C-207ENST00000484378 MGPP08493 103 aa18.59■□□□□ 0.57
HLA-C-207ENST00000484378 IGLC6P0CF74 106 aa18.59■□□□□ 0.57
HLA-C-207ENST00000484378 SULT1A2P50226 295 aa18.59■□□□□ 0.57
HLA-C-207ENST00000484378 MEF2BQ02080 365 aaPredicted RBP18.59■□□□□ 0.57
HLA-C-207ENST00000484378 RAB19A4D1S5 217 aa18.58■□□□□ 0.56
HLA-C-207ENST00000484378 PDE6DO43924 150 aa18.58■□□□□ 0.56
HLA-C-207ENST00000484378 IFNA1P01562 189 aa18.58■□□□□ 0.56
HLA-C-207ENST00000484378 C14orf177Q52M58 125 aa18.58■□□□□ 0.56
HLA-C-207ENST00000484378 NTM-AS1Q6ZSK4 140 aa18.58■□□□□ 0.56
HLA-C-207ENST00000484378 LINC00528Q8N1L1 170 aa18.58■□□□□ 0.56
HLA-C-207ENST00000484378 SMIM12Q96EX1 92 aa18.58■□□□□ 0.56
HLA-C-207ENST00000484378 C19orf71A6NCJ1 209 aa18.57■□□□□ 0.56
HLA-C-207ENST00000484378 PLA2G1BP04054 148 aaKnown RBP18.57■□□□□ 0.56
HLA-C-207ENST00000484378 SCXQ7RTU7 201 aa18.56■□□□□ 0.56
HLA-C-207ENST00000484378 TRBV25-1A0A075B6N4 114 aa18.55■□□□□ 0.56
HLA-C-207ENST00000484378 XKRY2A2RUG3 117 aa18.55■□□□□ 0.56
HLA-C-207ENST00000484378 H7C1H1 209 aa18.55■□□□□ 0.56
HLA-C-207ENST00000484378 P01737 135 aa18.55■□□□□ 0.56
HLA-C-207ENST00000484378 CACNG7P62955 275 aa18.55■□□□□ 0.56
HLA-C-207ENST00000484378 MED9Q9NWA0 146 aa18.55■□□□□ 0.56
HLA-C-207ENST00000484378 HLA-DQA1P01909 254 aa18.54■□□□□ 0.56
HLA-C-207ENST00000484378 BCL2P10415 239 aa18.54■□□□□ 0.56
HLA-C-207ENST00000484378 GAGE6Q13070 117 aa18.54■□□□□ 0.56
HLA-C-207ENST00000484378 MIAQ16674 131 aa18.54■□□□□ 0.56
HLA-C-207ENST00000484378 TCTE3Q8IZS6 198 aa18.54■□□□□ 0.56
HLA-C-207ENST00000484378 M0QY20 66 aa18.53■□□□□ 0.56
HLA-C-207ENST00000484378 SUMO4Q6EEV6 95 aa18.53■□□□□ 0.56
HLA-C-207ENST00000484378 TRBV20OR9-2A0A075B6H5 130 aa18.52■□□□□ 0.56
HLA-C-207ENST00000484378 RBX1P62877 108 aa18.52■□□□□ 0.56
HLA-C-207ENST00000484378 CLPSL2Q6UWE3 100 aa18.52■□□□□ 0.56
HLA-C-207ENST00000484378 BIN3Q9NQY0 253 aa18.52■□□□□ 0.56
HLA-C-207ENST00000484378 IGHV1-24A0A0C4DH33 117 aa18.51■□□□□ 0.55
HLA-C-207ENST00000484378 F2Z2F3 143 aa18.51■□□□□ 0.55
HLA-C-207ENST00000484378 IQCJQ1A5X6 159 aa18.51■□□□□ 0.55
HLA-C-207ENST00000484378 SLC51BQ86UW2 128 aa18.51■□□□□ 0.55
HLA-C-207ENST00000484378 CHAC1Q9BUX1 264 aa18.51■□□□□ 0.55
HLA-C-207ENST00000484378 USP17L23D6RBM5 183 aa18.5■□□□□ 0.55
HLA-C-207ENST00000484378 TRGC1P0CF51 173 aa18.49■□□□□ 0.55
HLA-C-207ENST00000484378 LYZL1Q6UWQ5 148 aa18.49■□□□□ 0.55
HLA-C-207ENST00000484378 LINC00269Q8N2A0 174 aa18.49■□□□□ 0.55
HLA-C-207ENST00000484378 PRR34Q9NV39 138 aa18.49■□□□□ 0.55
HLA-C-207ENST00000484378 NKX2-5P52952 324 aaPredicted RBP18.48■□□□□ 0.55
HLA-C-207ENST00000484378 RASL11AQ6T310 242 aa18.47■□□□□ 0.55
HLA-C-207ENST00000484378 TAGLN2P37802 199 aaKnown RBP18.46■□□□□ 0.55
HLA-C-207ENST00000484378 DPH3P1Q9H4G8 78 aa18.46■□□□□ 0.55
HLA-C-207ENST00000484378 NTF3P20783 257 aa18.45■□□□□ 0.54
HLA-C-207ENST00000484378 CIRBP-AS1Q8TBR5 109 aa18.45■□□□□ 0.54
HLA-C-207ENST00000484378 CTRLP40313 264 aa18.44■□□□□ 0.54
HLA-C-207ENST00000484378 NUDT10Q8NFP7 164 aa18.44■□□□□ 0.54
HLA-C-207ENST00000484378 NUDT11Q96G61 164 aa18.44■□□□□ 0.54
HLA-C-207ENST00000484378 J3QL48 77 aa18.43■□□□□ 0.54
HLA-C-207ENST00000484378 C9orf62Q8N4C0 152 aa18.43■□□□□ 0.54
HLA-C-207ENST00000484378 TMEM243Q9BU79 118 aa18.43■□□□□ 0.54
HLA-C-207ENST00000484378 DEFB104AQ8WTQ1 72 aa18.42■□□□□ 0.54
HLA-C-207ENST00000484378 NIT2Q9NQR4 276 aa18.42■□□□□ 0.54
HLA-C-207ENST00000484378 PRSS1P07477 247 aa18.41■□□□□ 0.54
HLA-C-207ENST00000484378 REG3AQ06141 175 aa18.41■□□□□ 0.54
HLA-C-207ENST00000484378 RPP21Q9H633 154 aaKnown RBP18.41■□□□□ 0.54
HLA-C-207ENST00000484378 TWIST1Q15672 202 aa18.4■□□□□ 0.54
HLA-C-207ENST00000484378 WDR73Q6P4I2 378 aa18.4■□□□□ 0.54
HLA-C-207ENST00000484378 KRTAP26-1Q6PEX3 210 aa18.4■□□□□ 0.54
HLA-C-207ENST00000484378 PGLYRP4Q96LB8 373 aa18.4■□□□□ 0.54
HLA-C-207ENST00000484378 RNASE7Q9H1E1 156 aaKnown RBP18.4■□□□□ 0.54
HLA-C-207ENST00000484378 IGLV10-54A0A075B6I4 117 aa18.39■□□□□ 0.53
HLA-C-207ENST00000484378 DGAT2L7PQ6IED9 249 aa18.39■□□□□ 0.53
HLA-C-207ENST00000484378 C20orf203Q8NBC4 194 aa18.39■□□□□ 0.53
HLA-C-207ENST00000484378 K7EN84 100 aa18.38■□□□□ 0.53
HLA-C-207ENST00000484378 CNFNQ9BYD5 112 aa18.38■□□□□ 0.53
HLA-C-207ENST00000484378 UBE2L6O14933 153 aa18.37■□□□□ 0.53
HLA-C-207ENST00000484378 IGLV4-60A0A075B6I1 120 aa18.36■□□□□ 0.53
HLA-C-207ENST00000484378 A0A1B0GUV1 79 aa18.36■□□□□ 0.53
HLA-C-207ENST00000484378 AMTP48728 403 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms