RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 INO80EQ8NBZ0 244 aaPredicted RBP8.06□□□□□ -1.12
UBR4-213ENST00000483922 ACTR3CQ9C0K3 210 aaPredicted RBP8.06□□□□□ -1.12
UBR4-213ENST00000483922 TNFSF18Q9UNG2 199 aa8.06□□□□□ -1.12
UBR4-213ENST00000483922 IGLV4-60A0A075B6I1 120 aa8.05□□□□□ -1.12
UBR4-213ENST00000483922 TRBV6-1A0A0K0K1D8 114 aa8.05□□□□□ -1.12
UBR4-213ENST00000483922 SSNA1O43805 119 aa8.05□□□□□ -1.12
UBR4-213ENST00000483922 UPK1BO75841 260 aa8.05□□□□□ -1.12
UBR4-213ENST00000483922 RAB5CP51148 216 aa8.05□□□□□ -1.12
UBR4-213ENST00000483922 REG3AQ06141 175 aa8.05□□□□□ -1.12
UBR4-213ENST00000483922 DERL1Q9BUN8 251 aa8.05□□□□□ -1.12
UBR4-213ENST00000483922 ZFP30Q9Y2G7 519 aa8.05□□□□□ -1.12
UBR4-213ENST00000483922 DEFA3P59666 94 aa8.04□□□□□ -1.12
UBR4-213ENST00000483922 PRR3P79522 188 aaKnown RBP8.04□□□□□ -1.12
UBR4-213ENST00000483922 ZNF56Q15929 161 aa8.04□□□□□ -1.12
UBR4-213ENST00000483922 Q5BKY6 102 aa8.04□□□□□ -1.12
UBR4-213ENST00000483922 PRSS3P2Q8NHM4 247 aa8.04□□□□□ -1.12
UBR4-213ENST00000483922 HIST1H2BAQ96A08 127 aa8.04□□□□□ -1.12
UBR4-213ENST00000483922 SSBP4Q9BWG4 385 aaPredicted RBP8.04□□□□□ -1.12
UBR4-213ENST00000483922 ZNF471Q9BX82 626 aaPredicted RBP8.04□□□□□ -1.12
UBR4-213ENST00000483922 LTAP01374 205 aa8.03□□□□□ -1.12
UBR4-213ENST00000483922 MBP02144 154 aa8.03□□□□□ -1.12
UBR4-213ENST00000483922 COX6A2Q02221 97 aa8.03□□□□□ -1.12
UBR4-213ENST00000483922 SRSF9Q13242 221 aaKnown RBP eCLIP8.03□□□□□ -1.12
UBR4-213ENST00000483922 IQCJQ1A5X6 159 aa8.03□□□□□ -1.12
UBR4-213ENST00000483922 WDR73Q6P4I2 378 aa8.03□□□□□ -1.12
UBR4-213ENST00000483922 C15orf56Q8N910 161 aa8.03□□□□□ -1.12
UBR4-213ENST00000483922 AQP10Q96PS8 301 aa8.03□□□□□ -1.12
UBR4-213ENST00000483922 SNAI2O43623 268 aa8.02□□□□□ -1.13
UBR4-213ENST00000483922 GTSF1Q8WW33 167 aa8.02□□□□□ -1.13
UBR4-213ENST00000483922 DPH3P1Q9H4G8 78 aa8.02□□□□□ -1.13
UBR4-213ENST00000483922 SSTP61278 116 aa8.01□□□□□ -1.13
UBR4-213ENST00000483922 PKIAP61925 76 aa8.01□□□□□ -1.13
UBR4-213ENST00000483922 RPL7L1Q6DKI1 246 aaKnown RBP8.01□□□□□ -1.13
UBR4-213ENST00000483922 LINC00299Q6ZSB3 139 aa8.01□□□□□ -1.13
UBR4-213ENST00000483922 LYPD6BQ8NI32 183 aa8.01□□□□□ -1.13
UBR4-213ENST00000483922 FMC1Q96HJ9 113 aa8.01□□□□□ -1.13
UBR4-213ENST00000483922 TRBV25-1A0A075B6N4 114 aa8□□□□□ -1.13
UBR4-213ENST00000483922 CTXND1A0A1B0GTU2 59 aa8□□□□□ -1.13
UBR4-213ENST00000483922 M0QY20 66 aa8□□□□□ -1.13
UBR4-213ENST00000483922 MLST8Q9BVC4 326 aa8□□□□□ -1.13
UBR4-213ENST00000483922 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.99□□□□□ -1.13
UBR4-213ENST00000483922 TRAV8-4A0A0B4J246 113 aa7.99□□□□□ -1.13
UBR4-213ENST00000483922 IGHV1-24A0A0C4DH33 117 aa7.99□□□□□ -1.13
UBR4-213ENST00000483922 A0A1B0GUV1 79 aa7.99□□□□□ -1.13
UBR4-213ENST00000483922 F5H697 171 aa7.99□□□□□ -1.13
UBR4-213ENST00000483922 P01737 135 aa7.99□□□□□ -1.13
UBR4-213ENST00000483922 MAJINQ3KP22 176 aa7.99□□□□□ -1.13
UBR4-213ENST00000483922 TMEM97Q5BJF2 176 aa7.99□□□□□ -1.13
UBR4-213ENST00000483922 C7orf33Q8WU49 177 aa7.99□□□□□ -1.13
UBR4-213ENST00000483922 S100ZQ8WXG8 99 aa7.99□□□□□ -1.13
UBR4-213ENST00000483922 IGKV2-24A0A0C4DH68 120 aa7.98□□□□□ -1.13
UBR4-213ENST00000483922 OR5AL1P0C617 328 aa7.98□□□□□ -1.13
UBR4-213ENST00000483922 UBE2G1P62253 170 aa7.98□□□□□ -1.13
UBR4-213ENST00000483922 STPG4Q8N801 248 aa7.98□□□□□ -1.13
UBR4-213ENST00000483922 NKX6-2Q9C056 277 aaPredicted RBP7.98□□□□□ -1.13
UBR4-213ENST00000483922 AP5S1Q9NUS5 200 aa7.98□□□□□ -1.13
UBR4-213ENST00000483922 NDUFA13Q9P0J0 144 aa7.98□□□□□ -1.13
UBR4-213ENST00000483922 A0A096LNI7 61 aa7.97□□□□□ -1.13
UBR4-213ENST00000483922 NDUFS6O75380 124 aaKnown RBP7.97□□□□□ -1.13
UBR4-213ENST00000483922 CXCL1P09341 107 aa7.97□□□□□ -1.13
UBR4-213ENST00000483922 HIGD2BQ4VC39 106 aa7.97□□□□□ -1.13
UBR4-213ENST00000483922 SPINK6Q6UWN8 80 aa7.97□□□□□ -1.13
UBR4-213ENST00000483922 FAT4Q6V0I7 4981 aa7.97□□□□□ -1.13
UBR4-213ENST00000483922 GAGE12HA6NDE8 117 aa7.96□□□□□ -1.14
UBR4-213ENST00000483922 RPS10P46783 165 aaKnown RBP7.96□□□□□ -1.14
UBR4-213ENST00000483922 SPANXN1Q5VSR9 72 aa7.96□□□□□ -1.14
UBR4-213ENST00000483922 SUMO4Q6EEV6 95 aa7.96□□□□□ -1.14
UBR4-213ENST00000483922 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.96□□□□□ -1.14
UBR4-213ENST00000483922 ALG5Q9Y673 324 aa7.96□□□□□ -1.14
UBR4-213ENST00000483922 GZMBP10144 247 aa7.95□□□□□ -1.14
UBR4-213ENST00000483922 FHITP49789 147 aa7.95□□□□□ -1.14
UBR4-213ENST00000483922 NKX2-5P52952 324 aaPredicted RBP7.95□□□□□ -1.14
UBR4-213ENST00000483922 MAP1LC3B2A6NCE7 125 aa7.94□□□□□ -1.14
UBR4-213ENST00000483922 A6NHS1 94 aa7.94□□□□□ -1.14
UBR4-213ENST00000483922 PAGE4O60829 102 aa7.94□□□□□ -1.14
UBR4-213ENST00000483922 AKR1C3P42330 323 aa7.94□□□□□ -1.14
UBR4-213ENST00000483922 CST9LP1Q5W188 147 aa7.94□□□□□ -1.14
UBR4-213ENST00000483922 TMEM243Q9BU79 118 aa7.94□□□□□ -1.14
UBR4-213ENST00000483922 KRTAP9-2Q9BYQ4 174 aa7.94□□□□□ -1.14
UBR4-213ENST00000483922 MAP1LC3BQ9GZQ8 125 aa7.94□□□□□ -1.14
UBR4-213ENST00000483922 REG3GQ6UW15 175 aa7.93□□□□□ -1.14
UBR4-213ENST00000483922 CYTL1Q9NRR1 136 aa7.93□□□□□ -1.14
UBR4-213ENST00000483922 SCO2A0A1W2PP80 73 aa7.92□□□□□ -1.14
UBR4-213ENST00000483922 MGPP08493 103 aa7.92□□□□□ -1.14
UBR4-213ENST00000483922 IGLC6P0CF74 106 aa7.92□□□□□ -1.14
UBR4-213ENST00000483922 BAGE2Q86Y30 109 aa7.92□□□□□ -1.14
UBR4-213ENST00000483922 LINC00526Q96FQ7 95 aa7.92□□□□□ -1.14
UBR4-213ENST00000483922 GVQW2A0A096LPI5 108 aaPredicted RBP7.91□□□□□ -1.14
UBR4-213ENST00000483922 IGKV3OR2-268A0A0C4DH90 116 aa7.91□□□□□ -1.14
UBR4-213ENST00000483922 G3V3Q6 166 aa7.91□□□□□ -1.14
UBR4-213ENST00000483922 PGLYRP4Q96LB8 373 aa7.91□□□□□ -1.14
UBR4-213ENST00000483922 AP1S3Q96PC3 154 aa7.91□□□□□ -1.14
UBR4-213ENST00000483922 TCEAL7Q9BRU2 100 aa7.91□□□□□ -1.14
UBR4-213ENST00000483922 H7C1H1 209 aa7.9□□□□□ -1.14
UBR4-213ENST00000483922 SMIM17P0DL12 118 aa7.9□□□□□ -1.14
UBR4-213ENST00000483922 SULT1A2P50226 295 aa7.9□□□□□ -1.14
UBR4-213ENST00000483922 FOXI1Q12951 378 aa7.9□□□□□ -1.14
UBR4-213ENST00000483922 AKR1C8PQ5T2L2 129 aa7.9□□□□□ -1.14
UBR4-213ENST00000483922 CFAP161Q6P656 301 aa7.9□□□□□ -1.14
UBR4-213ENST00000483922 RASL11AQ6T310 242 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms