RNA–Protein interactions for RNA: ENST00000483128.1

SHANK1-207, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 3

Gene SHANK1, Length 780 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-207ENST00000483128 MGPP08493 103 aa9.27□□□□□ -0.93
SHANK1-207ENST00000483128 INAFM2P0DMQ5 153 aa9.27□□□□□ -0.93
SHANK1-207ENST00000483128 ELOBQ15370 118 aa9.27□□□□□ -0.93
SHANK1-207ENST00000483128 SLC51BQ86UW2 128 aa9.27□□□□□ -0.93
SHANK1-207ENST00000483128 FER1L6-AS1Q8NA97 138 aa9.27□□□□□ -0.93
SHANK1-207ENST00000483128 AP1S3Q96PC3 154 aa9.27□□□□□ -0.93
SHANK1-207ENST00000483128 TMEM70Q9BUB7 260 aa9.27□□□□□ -0.93
SHANK1-207ENST00000483128 COX11Q9Y6N1 276 aa9.27□□□□□ -0.93
SHANK1-207ENST00000483128 KIF25-AS1Q9Y6Z4 181 aa9.27□□□□□ -0.93
SHANK1-207ENST00000483128 C19orf71A6NCJ1 209 aa9.26□□□□□ -0.93
SHANK1-207ENST00000483128 PDE6DO43924 150 aa9.26□□□□□ -0.93
SHANK1-207ENST00000483128 C1QBP02746 253 aa9.26□□□□□ -0.93
SHANK1-207ENST00000483128 LINC01620Q4KN68 170 aa9.26□□□□□ -0.93
SHANK1-207ENST00000483128 C15orf54Q8N8G6 183 aa9.26□□□□□ -0.93
SHANK1-207ENST00000483128 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.26□□□□□ -0.93
SHANK1-207ENST00000483128 CHCHD5Q9BSY4 110 aa9.26□□□□□ -0.93
SHANK1-207ENST00000483128 CHCHD7Q9BUK0 85 aa9.26□□□□□ -0.93
SHANK1-207ENST00000483128 DNAH8Q96JB1 4490 aa9.26□□□□□ -0.93
SHANK1-207ENST00000483128 TRBV20OR9-2A0A075B6H5 130 aa9.25□□□□□ -0.93
SHANK1-207ENST00000483128 P01737 135 aa9.25□□□□□ -0.93
SHANK1-207ENST00000483128 IGLC6P0CF74 106 aa9.25□□□□□ -0.93
SHANK1-207ENST00000483128 BCL2P10415 239 aa9.25□□□□□ -0.93
SHANK1-207ENST00000483128 RPS20P60866 119 aaKnown RBP9.25□□□□□ -0.93
SHANK1-207ENST00000483128 MPV17L2Q567V2 206 aa9.25□□□□□ -0.93
SHANK1-207ENST00000483128 hCG_2014768A0A024R1R8 64 aa9.24□□□□□ -0.93
SHANK1-207ENST00000483128 ANGP03950 147 aaKnown RBP9.24□□□□□ -0.93
SHANK1-207ENST00000483128 ENHOQ6UWT2 76 aa9.24□□□□□ -0.93
SHANK1-207ENST00000483128 Q6ZNX1 250 aa9.24□□□□□ -0.93
SHANK1-207ENST00000483128 NTM-AS1Q6ZSK4 140 aa9.24□□□□□ -0.93
SHANK1-207ENST00000483128 Q8N976 141 aa9.24□□□□□ -0.93
SHANK1-207ENST00000483128 VAX2Q9UIW0 290 aa9.24□□□□□ -0.93
SHANK1-207ENST00000483128 VPS13BQ7Z7G8 4022 aa9.24□□□□□ -0.93
SHANK1-207ENST00000483128 XKRY2A2RUG3 117 aa9.23□□□□□ -0.93
SHANK1-207ENST00000483128 FAM229AH3BQW9 127 aa9.23□□□□□ -0.93
SHANK1-207ENST00000483128 CRPP02741 224 aa9.23□□□□□ -0.93
SHANK1-207ENST00000483128 CACNG7P62955 275 aa9.23□□□□□ -0.93
SHANK1-207ENST00000483128 Q0VG73 95 aa9.23□□□□□ -0.93
SHANK1-207ENST00000483128 LYZL1Q6UWQ5 148 aa9.23□□□□□ -0.93
SHANK1-207ENST00000483128 SMIM12Q96EX1 92 aa9.23□□□□□ -0.93
SHANK1-207ENST00000483128 M0QY20 66 aa9.22□□□□□ -0.93
SHANK1-207ENST00000483128 GAGE6Q13070 117 aa9.22□□□□□ -0.93
SHANK1-207ENST00000483128 SUMO4Q6EEV6 95 aa9.22□□□□□ -0.93
SHANK1-207ENST00000483128 ATRAIDQ6UW56 229 aa9.22□□□□□ -0.93
SHANK1-207ENST00000483128 AKAP14Q86UN6 197 aa9.22□□□□□ -0.93
SHANK1-207ENST00000483128 NUDT10Q8NFP7 164 aa9.22□□□□□ -0.93
SHANK1-207ENST00000483128 NUDT11Q96G61 164 aa9.22□□□□□ -0.93
SHANK1-207ENST00000483128 C1orf43Q9BWL3 253 aa9.22□□□□□ -0.93
SHANK1-207ENST00000483128 F2Z2F3 143 aa9.21□□□□□ -0.94
SHANK1-207ENST00000483128 NKX2-5P52952 324 aaPredicted RBP9.21□□□□□ -0.94
SHANK1-207ENST00000483128 TMEM97Q5BJF2 176 aa9.21□□□□□ -0.94
SHANK1-207ENST00000483128 CLPSL2Q6UWE3 100 aa9.21□□□□□ -0.94
SHANK1-207ENST00000483128 C9orf62Q8N4C0 152 aa9.21□□□□□ -0.94
SHANK1-207ENST00000483128 BIN3Q9NQY0 253 aa9.21□□□□□ -0.94
SHANK1-207ENST00000483128 TRBV25-1A0A075B6N4 114 aa9.2□□□□□ -0.94
SHANK1-207ENST00000483128 H7C1H1 209 aa9.2□□□□□ -0.94
SHANK1-207ENST00000483128 NTF3P20783 257 aa9.2□□□□□ -0.94
SHANK1-207ENST00000483128 RBX1P62877 108 aa9.2□□□□□ -0.94
SHANK1-207ENST00000483128 ALKAL2Q6UX46 152 aa9.2□□□□□ -0.94
SHANK1-207ENST00000483128 DEFB104AQ8WTQ1 72 aa9.2□□□□□ -0.94
SHANK1-207ENST00000483128 RNASE7Q9H1E1 156 aaKnown RBP9.2□□□□□ -0.94
SHANK1-207ENST00000483128 FLG2Q5D862 2391 aaPredicted RBP9.2□□□□□ -0.94
SHANK1-207ENST00000483128 K7EN84 100 aa9.19□□□□□ -0.94
SHANK1-207ENST00000483128 HLA-DQA1P01909 254 aa9.19□□□□□ -0.94
SHANK1-207ENST00000483128 TRGC1P0CF51 173 aa9.19□□□□□ -0.94
SHANK1-207ENST00000483128 TAGLN2P37802 199 aaKnown RBP9.19□□□□□ -0.94
SHANK1-207ENST00000483128 PKIAP61925 76 aa9.19□□□□□ -0.94
SHANK1-207ENST00000483128 Q6ZSA8 131 aa9.19□□□□□ -0.94
SHANK1-207ENST00000483128 OCC1Q8TAD7 63 aa9.19□□□□□ -0.94
SHANK1-207ENST00000483128 IGHV1-24A0A0C4DH33 117 aa9.18□□□□□ -0.94
SHANK1-207ENST00000483128 TWIST1Q15672 202 aa9.18□□□□□ -0.94
SHANK1-207ENST00000483128 RASL11AQ6T310 242 aa9.18□□□□□ -0.94
SHANK1-207ENST00000483128 LINC00269Q8N2A0 174 aa9.18□□□□□ -0.94
SHANK1-207ENST00000483128 DPH3P1Q9H4G8 78 aa9.18□□□□□ -0.94
SHANK1-207ENST00000483128 RPP21Q9H633 154 aaKnown RBP9.18□□□□□ -0.94
SHANK1-207ENST00000483128 CTRLP40313 264 aa9.17□□□□□ -0.94
SHANK1-207ENST00000483128 MIAQ16674 131 aa9.17□□□□□ -0.94
SHANK1-207ENST00000483128 IQCJQ1A5X6 159 aa9.17□□□□□ -0.94
SHANK1-207ENST00000483128 NIT2Q9NQR4 276 aa9.17□□□□□ -0.94
SHANK1-207ENST00000483128 USP17L23D6RBM5 183 aa9.16□□□□□ -0.94
SHANK1-207ENST00000483128 CEBPGP53567 150 aa9.16□□□□□ -0.94
SHANK1-207ENST00000483128 BLOC1S1P78537 153 aa9.16□□□□□ -0.94
SHANK1-207ENST00000483128 C14orf177Q52M58 125 aa9.16□□□□□ -0.94
SHANK1-207ENST00000483128 SCXQ7RTU7 201 aa9.16□□□□□ -0.94
SHANK1-207ENST00000483128 LINC00528Q8N1L1 170 aa9.16□□□□□ -0.94
SHANK1-207ENST00000483128 PRR34Q9NV39 138 aa9.16□□□□□ -0.94
SHANK1-207ENST00000483128 IGLV10-54A0A075B6I4 117 aa9.15□□□□□ -0.94
SHANK1-207ENST00000483128 TRAV26-2A0A0B4J265 109 aa9.15□□□□□ -0.94
SHANK1-207ENST00000483128 WDR73Q6P4I2 378 aa9.15□□□□□ -0.94
SHANK1-207ENST00000483128 GTSF1Q8WW33 167 aa9.15□□□□□ -0.94
SHANK1-207ENST00000483128 TMEM243Q9BU79 118 aa9.15□□□□□ -0.94
SHANK1-207ENST00000483128 SRRM2Q9UQ35 2752 aaKnown RBP9.14□□□□□ -0.95
SHANK1-207ENST00000483128 REG3AQ06141 175 aa9.14□□□□□ -0.95
SHANK1-207ENST00000483128 CNFNQ9BYD5 112 aa9.14□□□□□ -0.95
SHANK1-207ENST00000483128 DMBT1Q9UGM3 2413 aaPredicted RBP9.13□□□□□ -0.95
SHANK1-207ENST00000483128 IGLV4-60A0A075B6I1 120 aa9.13□□□□□ -0.95
SHANK1-207ENST00000483128 TMEM250H0YL14 139 aa9.13□□□□□ -0.95
SHANK1-207ENST00000483128 GATCO43716 136 aaKnown RBP9.13□□□□□ -0.95
SHANK1-207ENST00000483128 PLA2G1BP04054 148 aaKnown RBP9.13□□□□□ -0.95
SHANK1-207ENST00000483128 PRSS1P07477 247 aa9.13□□□□□ -0.95
SHANK1-207ENST00000483128 FOXA3P55318 350 aaPredicted RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms