RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 CFAP126Q5VTH2 177 aa4.86□□□□□ -1.63
CSDE1-206ENST00000483030 DPPA3Q6W0C5 159 aa4.86□□□□□ -1.63
CSDE1-206ENST00000483030 OR5C1Q8NGR4 320 aa4.86□□□□□ -1.63
CSDE1-206ENST00000483030 ATP6V0E2Q8NHE4 81 aa4.86□□□□□ -1.63
CSDE1-206ENST00000483030 BAALCQ8WXS3 180 aa4.86□□□□□ -1.63
CSDE1-206ENST00000483030 CHAC1Q9BUX1 264 aa4.86□□□□□ -1.63
CSDE1-206ENST00000483030 CTDSP1Q9GZU7 261 aa4.86□□□□□ -1.63
CSDE1-206ENST00000483030 CSDC2Q9Y534 153 aaKnown RBP4.86□□□□□ -1.63
CSDE1-206ENST00000483030 UBR4Q5T4S7 5183 aa4.86□□□□□ -1.63
CSDE1-206ENST00000483030 TRAV8-3A0A0A6YYJ7 113 aa4.85□□□□□ -1.63
CSDE1-206ENST00000483030 TRAV21A0A0B4J279 112 aa4.85□□□□□ -1.63
CSDE1-206ENST00000483030 SCO2A0A1W2PP80 73 aa4.85□□□□□ -1.63
CSDE1-206ENST00000483030 PGPA6NDG6 321 aa4.85□□□□□ -1.63
CSDE1-206ENST00000483030 RBFOX3A6NFN3 312 aa4.85□□□□□ -1.63
CSDE1-206ENST00000483030 UBE2L3P68036 154 aaKnown RBP4.85□□□□□ -1.63
CSDE1-206ENST00000483030 RHOHQ15669 191 aa4.85□□□□□ -1.63
CSDE1-206ENST00000483030 AKR1C8PQ5T2L2 129 aa4.85□□□□□ -1.63
CSDE1-206ENST00000483030 DAZ4Q86SG3 579 aaKnown RBP4.85□□□□□ -1.63
CSDE1-206ENST00000483030 SVBPQ8N300 66 aa4.85□□□□□ -1.63
CSDE1-206ENST00000483030 CIRBP-AS1Q8TBR5 109 aa4.85□□□□□ -1.63
CSDE1-206ENST00000483030 TMED6Q8WW62 240 aa4.85□□□□□ -1.63
CSDE1-206ENST00000483030 TVP23CQ96ET8 276 aa4.85□□□□□ -1.63
CSDE1-206ENST00000483030 ATP5SQ99766 215 aa4.85□□□□□ -1.63
CSDE1-206ENST00000483030 NMES1Q9C002 83 aa4.85□□□□□ -1.63
CSDE1-206ENST00000483030 SDF2L1Q9HCN8 221 aa4.85□□□□□ -1.63
CSDE1-206ENST00000483030 DAZ3Q9NR90 486 aaKnown RBP4.85□□□□□ -1.63
CSDE1-206ENST00000483030 HMCN2Q8NDA2 5059 aa4.85□□□□□ -1.63
CSDE1-206ENST00000483030 LRP1Q07954 4544 aaKnown RBP4.85□□□□□ -1.63
CSDE1-206ENST00000483030 TRAV8-1A0A0A6YYK1 113 aa4.84□□□□□ -1.63
CSDE1-206ENST00000483030 TMEM218A2RU14 115 aa4.84□□□□□ -1.63
CSDE1-206ENST00000483030 LYRM1O43325 122 aa4.84□□□□□ -1.63
CSDE1-206ENST00000483030 APOC3P02656 99 aa4.84□□□□□ -1.63
CSDE1-206ENST00000483030 FAM74A1Q5RGS3 127 aa4.84□□□□□ -1.63
CSDE1-206ENST00000483030 COL5A1-AS1Q5SY13 56 aa4.84□□□□□ -1.63
CSDE1-206ENST00000483030 KCNIP4Q6PIL6 250 aa4.84□□□□□ -1.63
CSDE1-206ENST00000483030 UQCC3Q6UW78 93 aa4.84□□□□□ -1.63
CSDE1-206ENST00000483030 GOLT1AQ6ZVE7 132 aa4.84□□□□□ -1.63
CSDE1-206ENST00000483030 C15orf54Q8N8G6 183 aa4.84□□□□□ -1.63
CSDE1-206ENST00000483030 Q8N976 141 aa4.84□□□□□ -1.63
CSDE1-206ENST00000483030 CMTM2Q8TAZ6 248 aa4.84□□□□□ -1.63
CSDE1-206ENST00000483030 ISOC2Q96AB3 205 aa4.84□□□□□ -1.63
CSDE1-206ENST00000483030 KCNS1Q96KK3 526 aa4.84□□□□□ -1.63
CSDE1-206ENST00000483030 WDR61Q9GZS3 305 aaKnown RBP4.84□□□□□ -1.63
CSDE1-206ENST00000483030 OTORQ9NRC9 128 aa4.84□□□□□ -1.63
CSDE1-206ENST00000483030 KCNIP2Q9NS61 270 aa4.84□□□□□ -1.63
CSDE1-206ENST00000483030 RNF222A6NCQ9 220 aa4.83□□□□□ -1.64
CSDE1-206ENST00000483030 GAGE12JA6NER3 117 aa4.83□□□□□ -1.64
CSDE1-206ENST00000483030 GGTLC3B5MD39 225 aa4.83□□□□□ -1.64
CSDE1-206ENST00000483030 C17orf112F2Z3M2 114 aa4.83□□□□□ -1.64
CSDE1-206ENST00000483030 PPP1R2P9O14990 202 aa4.83□□□□□ -1.64
CSDE1-206ENST00000483030 CCL25O15444 150 aa4.83□□□□□ -1.64
CSDE1-206ENST00000483030 MGST1P10620 155 aaKnown RBP4.83□□□□□ -1.64
CSDE1-206ENST00000483030 PMCHP20382 165 aa4.83□□□□□ -1.64
CSDE1-206ENST00000483030 GAGE4Q13068 117 aa4.83□□□□□ -1.64
CSDE1-206ENST00000483030 GAGE5Q13069 117 aa4.83□□□□□ -1.64
CSDE1-206ENST00000483030 TMEM241Q24JQ0 296 aa4.83□□□□□ -1.64
CSDE1-206ENST00000483030 FFAR4Q5NUL3 377 aa4.83□□□□□ -1.64
CSDE1-206ENST00000483030 MRAP2Q96G30 205 aa4.83□□□□□ -1.64
CSDE1-206ENST00000483030 DNAJC30Q96LL9 226 aa4.83□□□□□ -1.64
CSDE1-206ENST00000483030 SGK494Q96LW2 274 aa4.83□□□□□ -1.64
CSDE1-206ENST00000483030 CST9LQ9H4G1 147 aa4.83□□□□□ -1.64
CSDE1-206ENST00000483030 OR5AC2Q9NZP5 309 aa4.83□□□□□ -1.64
CSDE1-206ENST00000483030 C11orf21Q9P2W6 132 aa4.83□□□□□ -1.64
CSDE1-206ENST00000483030 Q9UF83 564 aa4.83□□□□□ -1.64
CSDE1-206ENST00000483030 COX11Q9Y6N1 276 aa4.83□□□□□ -1.64
CSDE1-206ENST00000483030 IGKV2D-24A0A075B6R9 120 aa4.82□□□□□ -1.64
CSDE1-206ENST00000483030 SIX6O95475 246 aa4.82□□□□□ -1.64
CSDE1-206ENST00000483030 IGLV2-8P01709 118 aa4.82□□□□□ -1.64
CSDE1-206ENST00000483030 ZNF80P51504 273 aaPredicted RBP4.82□□□□□ -1.64
CSDE1-206ENST00000483030 TAS2R45P59539 299 aa4.82□□□□□ -1.64
CSDE1-206ENST00000483030 GNG5P63218 68 aa4.82□□□□□ -1.64
CSDE1-206ENST00000483030 ACOT6Q3I5F7 207 aaPredicted RBP4.82□□□□□ -1.64
CSDE1-206ENST00000483030 LRRC37A5PQ49AS3 106 aa4.82□□□□□ -1.64
CSDE1-206ENST00000483030 KHDC3LQ587J8 217 aa4.82□□□□□ -1.64
CSDE1-206ENST00000483030 ZNF506Q5JVG8 444 aa4.82□□□□□ -1.64
CSDE1-206ENST00000483030 PRR27Q6MZM9 219 aa4.82□□□□□ -1.64
CSDE1-206ENST00000483030 OR2T35Q8NGX2 323 aa4.82□□□□□ -1.64
CSDE1-206ENST00000483030 RMI2Q96E14 147 aa4.82□□□□□ -1.64
CSDE1-206ENST00000483030 C9orf85Q96MD7 179 aa4.82□□□□□ -1.64
CSDE1-206ENST00000483030 SH3BGRL3Q9H299 93 aa4.82□□□□□ -1.64
CSDE1-206ENST00000483030 H0YIZ8 118 aa4.81□□□□□ -1.64
CSDE1-206ENST00000483030 TAAR5O14804 337 aa4.81□□□□□ -1.64
CSDE1-206ENST00000483030 IFNA1P01562 189 aa4.81□□□□□ -1.64
CSDE1-206ENST00000483030 RNASE3P12724 160 aaKnown RBP4.81□□□□□ -1.64
CSDE1-206ENST00000483030 RPL37AP61513 92 aaKnown RBP4.81□□□□□ -1.64
CSDE1-206ENST00000483030 EIF5AP63241 154 aaKnown RBP4.81□□□□□ -1.64
CSDE1-206ENST00000483030 GAGE6Q13070 117 aa4.81□□□□□ -1.64
CSDE1-206ENST00000483030 PEA15Q15121 130 aa4.81□□□□□ -1.64
CSDE1-206ENST00000483030 NIT1Q86X76 327 aa4.81□□□□□ -1.64
CSDE1-206ENST00000483030 SMIM20Q8N5G0 67 aa4.81□□□□□ -1.64
CSDE1-206ENST00000483030 CYB561D1Q8N8Q1 229 aa4.81□□□□□ -1.64
CSDE1-206ENST00000483030 TMEM75Q8N9X5 138 aa4.81□□□□□ -1.64
CSDE1-206ENST00000483030 INO80EQ8NBZ0 244 aaPredicted RBP4.81□□□□□ -1.64
CSDE1-206ENST00000483030 SAMD10Q9BYL1 202 aa4.81□□□□□ -1.64
CSDE1-206ENST00000483030 ACTR3CQ9C0K3 210 aaPredicted RBP4.81□□□□□ -1.64
CSDE1-206ENST00000483030 KLK12Q9UKR0 248 aa4.81□□□□□ -1.64
CSDE1-206ENST00000483030 A0A087WWC5 75 aa4.8□□□□□ -1.64
CSDE1-206ENST00000483030 USP17L23D6RBM5 183 aa4.8□□□□□ -1.64
CSDE1-206ENST00000483030 GCGP01275 180 aa4.8□□□□□ -1.64
CSDE1-206ENST00000483030 MT-ND4LP03901 98 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms