RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 IGKV2D-24A0A075B6R9 120 aa13.26□□□□□ -0.29
MSH5-215ENST00000482280 TRBV6-8A0A0A6YYG3 113 aa13.26□□□□□ -0.29
MSH5-215ENST00000482280 EPM2AB3EWF7 344 aa13.26□□□□□ -0.29
MSH5-215ENST00000482280 F2Z2F3 143 aa13.26□□□□□ -0.29
MSH5-215ENST00000482280 CRPP02741 224 aa13.26□□□□□ -0.29
MSH5-215ENST00000482280 GZMBP10144 247 aa13.26□□□□□ -0.29
MSH5-215ENST00000482280 Q0VG73 95 aa13.26□□□□□ -0.29
MSH5-215ENST00000482280 UBE2WQ96B02 151 aa13.26□□□□□ -0.29
MSH5-215ENST00000482280 CHCHD5Q9BSY4 110 aa13.26□□□□□ -0.29
MSH5-215ENST00000482280 PCLOQ9Y6V0 5065 aa13.26□□□□□ -0.29
MSH5-215ENST00000482280 BLOC1S1P78537 153 aa13.25□□□□□ -0.29
MSH5-215ENST00000482280 FRZBQ92765 325 aa13.25□□□□□ -0.29
MSH5-215ENST00000482280 IGLV2-8P01709 118 aa13.24□□□□□ -0.29
MSH5-215ENST00000482280 TRGC1P0CF51 173 aa13.24□□□□□ -0.29
MSH5-215ENST00000482280 C19orf71A6NCJ1 209 aa13.23□□□□□ -0.29
MSH5-215ENST00000482280 LECT2O14960 151 aa13.23□□□□□ -0.29
MSH5-215ENST00000482280 IGLC6P0CF74 106 aa13.23□□□□□ -0.29
MSH5-215ENST00000482280 C9orf62Q8N4C0 152 aa13.23□□□□□ -0.29
MSH5-215ENST00000482280 TMEM70Q9BUB7 260 aa13.22□□□□□ -0.29
MSH5-215ENST00000482280 ANGP03950 147 aaKnown RBP13.21□□□□□ -0.29
MSH5-215ENST00000482280 ALKAL2Q6UX46 152 aa13.21□□□□□ -0.29
MSH5-215ENST00000482280 C15orf54Q8N8G6 183 aa13.21□□□□□ -0.29
MSH5-215ENST00000482280 Q8N976 141 aa13.21□□□□□ -0.29
MSH5-215ENST00000482280 BAALCQ8WXS3 180 aa13.21□□□□□ -0.29
MSH5-215ENST00000482280 DNAJC30Q96LL9 226 aa13.21□□□□□ -0.29
MSH5-215ENST00000482280 C1orf43Q9BWL3 253 aa13.21□□□□□ -0.29
MSH5-215ENST00000482280 TRBV20OR9-2A0A075B6H5 130 aa13.2□□□□□ -0.3
MSH5-215ENST00000482280 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.2□□□□□ -0.3
MSH5-215ENST00000482280 TRBV25-1A0A075B6N4 114 aa13.2□□□□□ -0.3
MSH5-215ENST00000482280 XGP55808 180 aa13.2□□□□□ -0.3
MSH5-215ENST00000482280 LYZL1Q6UWQ5 148 aa13.2□□□□□ -0.3
MSH5-215ENST00000482280 KIF25-AS1Q9Y6Z4 181 aa13.2□□□□□ -0.3
MSH5-215ENST00000482280 RYR1P21817 5038 aa13.2□□□□□ -0.3
MSH5-215ENST00000482280 RPP21Q9H633 154 aaKnown RBP13.19□□□□□ -0.3
MSH5-215ENST00000482280 NTF3P20783 257 aa13.18□□□□□ -0.3
MSH5-215ENST00000482280 CEBPGP53567 150 aa13.18□□□□□ -0.3
MSH5-215ENST00000482280 TWIST1Q15672 202 aa13.18□□□□□ -0.3
MSH5-215ENST00000482280 SMIM15Q7Z3B0 74 aa13.18□□□□□ -0.3
MSH5-215ENST00000482280 NUDT10Q8NFP7 164 aa13.18□□□□□ -0.3
MSH5-215ENST00000482280 NUDT11Q96G61 164 aa13.18□□□□□ -0.3
MSH5-215ENST00000482280 DPH3P1Q9H4G8 78 aa13.18□□□□□ -0.3
MSH5-215ENST00000482280 IGHV1-24A0A0C4DH33 117 aa13.17□□□□□ -0.3
MSH5-215ENST00000482280 TMEM250H0YL14 139 aa13.17□□□□□ -0.3
MSH5-215ENST00000482280 FAM229AH3BQW9 127 aa13.17□□□□□ -0.3
MSH5-215ENST00000482280 C14orf177Q52M58 125 aa13.17□□□□□ -0.3
MSH5-215ENST00000482280 MPV17L2Q567V2 206 aa13.17□□□□□ -0.3
MSH5-215ENST00000482280 SUMO4Q6EEV6 95 aa13.17□□□□□ -0.3
MSH5-215ENST00000482280 RASL11AQ6T310 242 aa13.17□□□□□ -0.3
MSH5-215ENST00000482280 M0QY20 66 aa13.16□□□□□ -0.3
MSH5-215ENST00000482280 WFDC2Q14508 124 aa13.16□□□□□ -0.3
MSH5-215ENST00000482280 Q5VSD8 79 aa13.16□□□□□ -0.3
MSH5-215ENST00000482280 WDR73Q6P4I2 378 aa13.16□□□□□ -0.3
MSH5-215ENST00000482280 RNASE7Q9H1E1 156 aaKnown RBP13.16□□□□□ -0.3
MSH5-215ENST00000482280 LRP1BQ9NZR2 4599 aa13.15□□□□□ -0.3
MSH5-215ENST00000482280 NKX2-5P52952 324 aaPredicted RBP13.15□□□□□ -0.3
MSH5-215ENST00000482280 GAGE6Q13070 117 aa13.15□□□□□ -0.3
MSH5-215ENST00000482280 OCC1Q8TAD7 63 aa13.15□□□□□ -0.3
MSH5-215ENST00000482280 EIF5A2Q9GZV4 153 aaKnown RBP13.15□□□□□ -0.3
MSH5-215ENST00000482280 CTRLP40313 264 aa13.14□□□□□ -0.31
MSH5-215ENST00000482280 MIAQ16674 131 aa13.14□□□□□ -0.31
MSH5-215ENST00000482280 ATRAIDQ6UW56 229 aa13.14□□□□□ -0.31
MSH5-215ENST00000482280 NIT2Q9NQR4 276 aa13.14□□□□□ -0.31
MSH5-215ENST00000482280 HSPG2P98160 4391 aa13.13□□□□□ -0.31
MSH5-215ENST00000482280 GATCO43716 136 aaKnown RBP13.13□□□□□ -0.31
MSH5-215ENST00000482280 SMR3BP02814 79 aaPredicted RBP13.13□□□□□ -0.31
MSH5-215ENST00000482280 NTM-AS1Q6ZSK4 140 aa13.13□□□□□ -0.31
MSH5-215ENST00000482280 BORCS7Q96B45 105 aa13.13□□□□□ -0.31
MSH5-215ENST00000482280 UBE2L6O14933 153 aa13.12□□□□□ -0.31
MSH5-215ENST00000482280 HLA-DQA1P01909 254 aa13.12□□□□□ -0.31
MSH5-215ENST00000482280 HAMPP81172 84 aa13.12□□□□□ -0.31
MSH5-215ENST00000482280 IQCJQ1A5X6 159 aa13.12□□□□□ -0.31
MSH5-215ENST00000482280 ENHOQ6UWT2 76 aa13.12□□□□□ -0.31
MSH5-215ENST00000482280 TMEM243Q9BU79 118 aa13.12□□□□□ -0.31
MSH5-215ENST00000482280 A8MWL6 223 aa13.11□□□□□ -0.31
MSH5-215ENST00000482280 K7EN84 100 aa13.11□□□□□ -0.31
MSH5-215ENST00000482280 INAFM2P0DMQ5 153 aa13.11□□□□□ -0.31
MSH5-215ENST00000482280 RBX1P62877 108 aa13.11□□□□□ -0.31
MSH5-215ENST00000482280 COTL1Q14019 142 aa13.1□□□□□ -0.31
MSH5-215ENST00000482280 CLPSL2Q6UWE3 100 aa13.1□□□□□ -0.31
MSH5-215ENST00000482280 LINC00269Q8N2A0 174 aa13.1□□□□□ -0.31
MSH5-215ENST00000482280 SMIM7Q9BQ49 75 aa13.09□□□□□ -0.31
MSH5-215ENST00000482280 CNFNQ9BYD5 112 aa13.09□□□□□ -0.31
MSH5-215ENST00000482280 AMTP48728 403 aa13.08□□□□□ -0.32
MSH5-215ENST00000482280 TEX261Q6UWH6 196 aa13.08□□□□□ -0.32
MSH5-215ENST00000482280 FAM231DQ6ZW35 169 aa13.08□□□□□ -0.32
MSH5-215ENST00000482280 LYPD6BQ8NI32 183 aa13.08□□□□□ -0.32
MSH5-215ENST00000482280 PGLYRP4Q96LB8 373 aa13.08□□□□□ -0.32
MSH5-215ENST00000482280 ZNF727A8MUV8 499 aa13.06□□□□□ -0.32
MSH5-215ENST00000482280 REG3AQ06141 175 aa13.06□□□□□ -0.32
MSH5-215ENST00000482280 PRR34Q9NV39 138 aa13.06□□□□□ -0.32
MSH5-215ENST00000482280 FAM30AQ9NZY2 134 aa13.06□□□□□ -0.32
MSH5-215ENST00000482280 DNAH5Q8TE73 4624 aa13.05□□□□□ -0.32
MSH5-215ENST00000482280 CT83Q5H943 113 aa13.05□□□□□ -0.32
MSH5-215ENST00000482280 GTSF1Q8WW33 167 aa13.05□□□□□ -0.32
MSH5-215ENST00000482280 FAM210AQ96ND0 272 aa13.05□□□□□ -0.32
MSH5-215ENST00000482280 TRAV8-4A0A0B4J246 113 aa13.04□□□□□ -0.32
MSH5-215ENST00000482280 USP17L23D6RBM5 183 aa13.04□□□□□ -0.32
MSH5-215ENST00000482280 NDUFS6O75380 124 aaKnown RBP13.04□□□□□ -0.32
MSH5-215ENST00000482280 LINC01620Q4KN68 170 aa13.04□□□□□ -0.32
MSH5-215ENST00000482280 APOBP04114 4563 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms