RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 C1orf43Q9BWL3 253 aa8.84□□□□□ -0.99
CTDSP1-208ENST00000482272 MANBALQ9NQG1 85 aa8.84□□□□□ -0.99
CTDSP1-208ENST00000482272 RAB5CP51148 216 aa8.83□□□□□ -1
CTDSP1-208ENST00000482272 C14orf177Q52M58 125 aa8.83□□□□□ -1
CTDSP1-208ENST00000482272 EIF5AL1Q6IS14 154 aaKnown RBP8.83□□□□□ -1
CTDSP1-208ENST00000482272 Q6ZSA8 131 aa8.83□□□□□ -1
CTDSP1-208ENST00000482272 CHCHD5Q9BSY4 110 aa8.83□□□□□ -1
CTDSP1-208ENST00000482272 DERL1Q9BUN8 251 aa8.83□□□□□ -1
CTDSP1-208ENST00000482272 GNG13Q9P2W3 67 aa8.83□□□□□ -1
CTDSP1-208ENST00000482272 MYCBP2O75592 4640 aa8.82□□□□□ -1
CTDSP1-208ENST00000482272 ANGP03950 147 aaKnown RBP8.82□□□□□ -1
CTDSP1-208ENST00000482272 ENHOQ6UWT2 76 aa8.82□□□□□ -1
CTDSP1-208ENST00000482272 C15orf54Q8N8G6 183 aa8.82□□□□□ -1
CTDSP1-208ENST00000482272 TRAV1-1A0A0B4J248 108 aa8.81□□□□□ -1
CTDSP1-208ENST00000482272 RPS20P60866 119 aaKnown RBP8.81□□□□□ -1
CTDSP1-208ENST00000482272 LINC01620Q4KN68 170 aa8.81□□□□□ -1
CTDSP1-208ENST00000482272 MPV17L2Q567V2 206 aa8.81□□□□□ -1
CTDSP1-208ENST00000482272 C11orf52Q96A22 123 aa8.81□□□□□ -1
CTDSP1-208ENST00000482272 AP1S3Q96PC3 154 aa8.81□□□□□ -1
CTDSP1-208ENST00000482272 VAX2Q9UIW0 290 aa8.81□□□□□ -1
CTDSP1-208ENST00000482272 KIF25-AS1Q9Y6Z4 181 aa8.81□□□□□ -1
CTDSP1-208ENST00000482272 H7C1H1 209 aa8.8□□□□□ -1
CTDSP1-208ENST00000482272 IGLV2-8P01709 118 aa8.8□□□□□ -1
CTDSP1-208ENST00000482272 MIAQ16674 131 aa8.8□□□□□ -1
CTDSP1-208ENST00000482272 LINC00528Q8N1L1 170 aa8.8□□□□□ -1
CTDSP1-208ENST00000482272 OR2D3Q8NGH3 330 aa8.8□□□□□ -1
CTDSP1-208ENST00000482272 TRBV25-1A0A075B6N4 114 aa8.79□□□□□ -1
CTDSP1-208ENST00000482272 XKRY2A2RUG3 117 aa8.79□□□□□ -1
CTDSP1-208ENST00000482272 GNG4P50150 75 aa8.79□□□□□ -1
CTDSP1-208ENST00000482272 CACNG7P62955 275 aa8.79□□□□□ -1
CTDSP1-208ENST00000482272 CENPWQ5EE01 88 aa8.79□□□□□ -1
CTDSP1-208ENST00000482272 NTM-AS1Q6ZSK4 140 aa8.79□□□□□ -1
CTDSP1-208ENST00000482272 FER1L6-AS1Q8NA97 138 aa8.79□□□□□ -1
CTDSP1-208ENST00000482272 SMIM12Q96EX1 92 aa8.79□□□□□ -1
CTDSP1-208ENST00000482272 TPPP3Q9BW30 176 aa8.79□□□□□ -1
CTDSP1-208ENST00000482272 BIN3Q9NQY0 253 aa8.79□□□□□ -1
CTDSP1-208ENST00000482272 SRRM2Q9UQ35 2752 aaKnown RBP8.78□□□□□ -1
CTDSP1-208ENST00000482272 RAB19A4D1S5 217 aa8.78□□□□□ -1
CTDSP1-208ENST00000482272 F2Z2F3 143 aa8.78□□□□□ -1
CTDSP1-208ENST00000482272 PDE6DO43924 150 aa8.78□□□□□ -1
CTDSP1-208ENST00000482272 IFNA1P01562 189 aa8.78□□□□□ -1
CTDSP1-208ENST00000482272 MGPP08493 103 aa8.78□□□□□ -1
CTDSP1-208ENST00000482272 IGLC6P0CF74 106 aa8.78□□□□□ -1
CTDSP1-208ENST00000482272 GZMBP10144 247 aa8.78□□□□□ -1
CTDSP1-208ENST00000482272 SCXQ7RTU7 201 aa8.78□□□□□ -1
CTDSP1-208ENST00000482272 CHAC1Q9BUX1 264 aa8.78□□□□□ -1
CTDSP1-208ENST00000482272 MED9Q9NWA0 146 aa8.78□□□□□ -1
CTDSP1-208ENST00000482272 C19orf71A6NCJ1 209 aa8.77□□□□□ -1.01
CTDSP1-208ENST00000482272 J3QL48 77 aa8.77□□□□□ -1.01
CTDSP1-208ENST00000482272 P01737 135 aa8.77□□□□□ -1.01
CTDSP1-208ENST00000482272 HLA-DQA1P01909 254 aa8.77□□□□□ -1.01
CTDSP1-208ENST00000482272 SULT1A2P50226 295 aa8.77□□□□□ -1.01
CTDSP1-208ENST00000482272 MEF2BQ02080 365 aaPredicted RBP8.77□□□□□ -1.01
CTDSP1-208ENST00000482272 GAGE6Q13070 117 aa8.77□□□□□ -1.01
CTDSP1-208ENST00000482272 DEFB104AQ8WTQ1 72 aa8.77□□□□□ -1.01
CTDSP1-208ENST00000482272 TRBV20OR9-2A0A075B6H5 130 aa8.76□□□□□ -1.01
CTDSP1-208ENST00000482272 IGHV1-24A0A0C4DH33 117 aa8.76□□□□□ -1.01
CTDSP1-208ENST00000482272 M0QY20 66 aa8.76□□□□□ -1.01
CTDSP1-208ENST00000482272 TRGC1P0CF51 173 aa8.76□□□□□ -1.01
CTDSP1-208ENST00000482272 RBX1P62877 108 aa8.76□□□□□ -1.01
CTDSP1-208ENST00000482272 IQCJQ1A5X6 159 aa8.76□□□□□ -1.01
CTDSP1-208ENST00000482272 USP17L23D6RBM5 183 aa8.75□□□□□ -1.01
CTDSP1-208ENST00000482272 SUMO4Q6EEV6 95 aa8.75□□□□□ -1.01
CTDSP1-208ENST00000482272 DGAT2L7PQ6IED9 249 aa8.75□□□□□ -1.01
CTDSP1-208ENST00000482272 LINC00269Q8N2A0 174 aa8.75□□□□□ -1.01
CTDSP1-208ENST00000482272 CIRBP-AS1Q8TBR5 109 aa8.75□□□□□ -1.01
CTDSP1-208ENST00000482272 PRR34Q9NV39 138 aa8.75□□□□□ -1.01
CTDSP1-208ENST00000482272 NTF3P20783 257 aa8.74□□□□□ -1.01
CTDSP1-208ENST00000482272 TAGLN2P37802 199 aaKnown RBP8.74□□□□□ -1.01
CTDSP1-208ENST00000482272 RASL11AQ6T310 242 aa8.74□□□□□ -1.01
CTDSP1-208ENST00000482272 LYZL1Q6UWQ5 148 aa8.74□□□□□ -1.01
CTDSP1-208ENST00000482272 SLC51BQ86UW2 128 aa8.74□□□□□ -1.01
CTDSP1-208ENST00000482272 DPH3P1Q9H4G8 78 aa8.74□□□□□ -1.01
CTDSP1-208ENST00000482272 BCL2P10415 239 aa8.73□□□□□ -1.01
CTDSP1-208ENST00000482272 NKX2-5P52952 324 aaPredicted RBP8.73□□□□□ -1.01
CTDSP1-208ENST00000482272 REG3AQ06141 175 aa8.73□□□□□ -1.01
CTDSP1-208ENST00000482272 WDR73Q6P4I2 378 aa8.73□□□□□ -1.01
CTDSP1-208ENST00000482272 CLPSL2Q6UWE3 100 aa8.73□□□□□ -1.01
CTDSP1-208ENST00000482272 TCTE3Q8IZS6 198 aa8.73□□□□□ -1.01
CTDSP1-208ENST00000482272 C9orf62Q8N4C0 152 aa8.73□□□□□ -1.01
CTDSP1-208ENST00000482272 CLRN3Q8NCR9 226 aa8.73□□□□□ -1.01
CTDSP1-208ENST00000482272 NUDT10Q8NFP7 164 aa8.73□□□□□ -1.01
CTDSP1-208ENST00000482272 NUDT11Q96G61 164 aa8.73□□□□□ -1.01
CTDSP1-208ENST00000482272 NIT2Q9NQR4 276 aa8.73□□□□□ -1.01
CTDSP1-208ENST00000482272 TRAV8-4A0A0B4J246 113 aa8.72□□□□□ -1.01
CTDSP1-208ENST00000482272 A0A1B0GUV1 79 aa8.72□□□□□ -1.01
CTDSP1-208ENST00000482272 PRSS1P07477 247 aa8.72□□□□□ -1.01
CTDSP1-208ENST00000482272 TMEM243Q9BU79 118 aa8.72□□□□□ -1.01
CTDSP1-208ENST00000482272 FLG2Q5D862 2391 aaPredicted RBP8.71□□□□□ -1.01
CTDSP1-208ENST00000482272 KRTAP29-1A8MX34 341 aaPredicted RBP8.71□□□□□ -1.02
CTDSP1-208ENST00000482272 UBE2L6O14933 153 aa8.71□□□□□ -1.02
CTDSP1-208ENST00000482272 TWIST1Q15672 202 aa8.71□□□□□ -1.02
CTDSP1-208ENST00000482272 KRTAP26-1Q6PEX3 210 aa8.71□□□□□ -1.02
CTDSP1-208ENST00000482272 C9orf163Q8N9P6 203 aa8.71□□□□□ -1.02
CTDSP1-208ENST00000482272 PGLYRP4Q96LB8 373 aa8.71□□□□□ -1.02
CTDSP1-208ENST00000482272 KRTAP10-4P60372 401 aaPredicted RBP8.7□□□□□ -1.02
CTDSP1-208ENST00000482272 C20orf203Q8NBC4 194 aa8.7□□□□□ -1.02
CTDSP1-208ENST00000482272 IGLV10-54A0A075B6I4 117 aa8.69□□□□□ -1.02
CTDSP1-208ENST00000482272 COTL1Q14019 142 aa8.69□□□□□ -1.02
CTDSP1-208ENST00000482272 OCC1Q8TAD7 63 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 134.6 ms