RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 AP1S3Q96PC3 154 aa7.21□□□□□ -1.26
SSBP1-210ENST00000481508 CNFNQ9BYD5 112 aa7.21□□□□□ -1.26
SSBP1-210ENST00000481508 OSTCQ9NRP0 149 aa7.21□□□□□ -1.26
SSBP1-210ENST00000481508 NAT8Q9UHE5 227 aa7.21□□□□□ -1.26
SSBP1-210ENST00000481508 A0A1W2PPQ1 181 aa7.2□□□□□ -1.26
SSBP1-210ENST00000481508 MGPP08493 103 aa7.2□□□□□ -1.26
SSBP1-210ENST00000481508 CT83Q5H943 113 aa7.2□□□□□ -1.26
SSBP1-210ENST00000481508 SOHLH1Q5JUK2 328 aa7.2□□□□□ -1.26
SSBP1-210ENST00000481508 NEXN-AS1Q8NBZ9 246 aa7.2□□□□□ -1.26
SSBP1-210ENST00000481508 ATP6V0E2Q8NHE4 81 aa7.2□□□□□ -1.26
SSBP1-210ENST00000481508 SMDT1Q9H4I9 107 aa7.2□□□□□ -1.26
SSBP1-210ENST00000481508 A8MWL6 223 aa7.19□□□□□ -1.26
SSBP1-210ENST00000481508 F2Z2F3 143 aa7.19□□□□□ -1.26
SSBP1-210ENST00000481508 TIRAPP58753 221 aa7.19□□□□□ -1.26
SSBP1-210ENST00000481508 RAB4BP61018 213 aa7.19□□□□□ -1.26
SSBP1-210ENST00000481508 SUMO4Q6EEV6 95 aa7.19□□□□□ -1.26
SSBP1-210ENST00000481508 TSKUQ8WUA8 353 aa7.19□□□□□ -1.26
SSBP1-210ENST00000481508 KRTAP4-8A0A0G2JLE6 195 aa7.18□□□□□ -1.26
SSBP1-210ENST00000481508 HIGD1CA8MV81 97 aa7.18□□□□□ -1.26
SSBP1-210ENST00000481508 F5H697 171 aa7.18□□□□□ -1.26
SSBP1-210ENST00000481508 EREGO14944 169 aa7.18□□□□□ -1.26
SSBP1-210ENST00000481508 SIVA1O15304 175 aa7.18□□□□□ -1.26
SSBP1-210ENST00000481508 ADCYAP1P18509 176 aa7.18□□□□□ -1.26
SSBP1-210ENST00000481508 UBE2D3P61077 147 aa7.18□□□□□ -1.26
SSBP1-210ENST00000481508 UBE2D2P62837 147 aa7.18□□□□□ -1.26
SSBP1-210ENST00000481508 TWIST1Q15672 202 aa7.18□□□□□ -1.26
SSBP1-210ENST00000481508 WDR73Q6P4I2 378 aa7.18□□□□□ -1.26
SSBP1-210ENST00000481508 SH2D6Q7Z4S9 175 aa7.18□□□□□ -1.26
SSBP1-210ENST00000481508 OR10G8Q8NGN5 311 aa7.18□□□□□ -1.26
SSBP1-210ENST00000481508 GTSF1LQ9H1H1 148 aa7.18□□□□□ -1.26
SSBP1-210ENST00000481508 TNFRSF18Q9Y5U5 241 aa7.18□□□□□ -1.26
SSBP1-210ENST00000481508 IGHV3-38A0A0C4DH36 116 aa7.17□□□□□ -1.26
SSBP1-210ENST00000481508 TRBV10-1A0A0K0K1A3 114 aa7.17□□□□□ -1.26
SSBP1-210ENST00000481508 A0A1B0GVY2 172 aa7.17□□□□□ -1.26
SSBP1-210ENST00000481508 M0QY20 66 aa7.17□□□□□ -1.26
SSBP1-210ENST00000481508 LELP1Q5T871 98 aa7.17□□□□□ -1.26
SSBP1-210ENST00000481508 DPH3P1Q9H4G8 78 aa7.17□□□□□ -1.26
SSBP1-210ENST00000481508 TRBV7-3A0A075B6L6 115 aa7.16□□□□□ -1.26
SSBP1-210ENST00000481508 TRAV26-2A0A0B4J265 109 aa7.16□□□□□ -1.26
SSBP1-210ENST00000481508 TRGC1P0CF51 173 aa7.16□□□□□ -1.26
SSBP1-210ENST00000481508 DNAH10OSP0CZ25 163 aa7.16□□□□□ -1.26
SSBP1-210ENST00000481508 SMIM17P0DL12 118 aa7.16□□□□□ -1.26
SSBP1-210ENST00000481508 C1orf134Q5TEV5 83 aa7.16□□□□□ -1.26
SSBP1-210ENST00000481508 C6orf223Q8N319 242 aa7.16□□□□□ -1.26
SSBP1-210ENST00000481508 C15orf54Q8N8G6 183 aa7.16□□□□□ -1.26
SSBP1-210ENST00000481508 NUP35Q8NFH5 326 aa7.16□□□□□ -1.26
SSBP1-210ENST00000481508 GFRA4Q9GZZ7 299 aa7.16□□□□□ -1.26
SSBP1-210ENST00000481508 SMIM27A0A1W2PRY6 76 aa7.15□□□□□ -1.26
SSBP1-210ENST00000481508 GAS8-AS1O95177 125 aa7.15□□□□□ -1.26
SSBP1-210ENST00000481508 IGHV3-30P01768 117 aa7.15□□□□□ -1.26
SSBP1-210ENST00000481508 IGHV3-33P01772 117 aa7.15□□□□□ -1.26
SSBP1-210ENST00000481508 IGHV3-30-3P0DP02 117 aa7.15□□□□□ -1.26
SSBP1-210ENST00000481508 IGHV3-30-5P0DP03 117 aa7.15□□□□□ -1.26
SSBP1-210ENST00000481508 RPL36AP83881 106 aaKnown RBP7.15□□□□□ -1.26
SSBP1-210ENST00000481508 OR10J3Q5JRS4 329 aa7.15□□□□□ -1.26
SSBP1-210ENST00000481508 COMMD7Q86VX2 200 aa7.15□□□□□ -1.26
SSBP1-210ENST00000481508 GATD1Q8NB37 220 aa7.15□□□□□ -1.26
SSBP1-210ENST00000481508 RPL36ALQ969Q0 106 aaKnown RBP7.15□□□□□ -1.26
SSBP1-210ENST00000481508 A0A1B0GUT8 65 aa7.14□□□□□ -1.27
SSBP1-210ENST00000481508 PRSS29PA6NIE9 313 aa7.14□□□□□ -1.27
SSBP1-210ENST00000481508 TTC32Q5I0X7 151 aa7.14□□□□□ -1.27
SSBP1-210ENST00000481508 Q6ZRN7 208 aaPredicted RBP7.14□□□□□ -1.27
SSBP1-210ENST00000481508 NTM-AS1Q6ZSK4 140 aa7.14□□□□□ -1.27
SSBP1-210ENST00000481508 DEFB104AQ8WTQ1 72 aa7.14□□□□□ -1.27
SSBP1-210ENST00000481508 RPL39LQ96EH5 51 aaKnown RBP7.14□□□□□ -1.27
SSBP1-210ENST00000481508 RNF185Q96GF1 192 aa7.14□□□□□ -1.27
SSBP1-210ENST00000481508 TRAV8-6A0A0B4J262 113 aa7.13□□□□□ -1.27
SSBP1-210ENST00000481508 LINC00862A6NCI5 91 aa7.13□□□□□ -1.27
SSBP1-210ENST00000481508 FAM231BA6NCW3 169 aa7.13□□□□□ -1.27
SSBP1-210ENST00000481508 LINC01556Q5JQF7 62 aa7.13□□□□□ -1.27
SSBP1-210ENST00000481508 CDPF1Q6NVV7 123 aa7.13□□□□□ -1.27
SSBP1-210ENST00000481508 RASL11AQ6T310 242 aa7.13□□□□□ -1.27
SSBP1-210ENST00000481508 APOBP04114 4563 aaKnown RBP7.13□□□□□ -1.27
SSBP1-210ENST00000481508 TMEM218A2RU14 115 aa7.12□□□□□ -1.27
SSBP1-210ENST00000481508 UQCC3Q6UW78 93 aa7.12□□□□□ -1.27
SSBP1-210ENST00000481508 LINC00336Q6ZUF6 198 aa7.12□□□□□ -1.27
SSBP1-210ENST00000481508 AMN1Q8IY45 258 aa7.12□□□□□ -1.27
SSBP1-210ENST00000481508 DNAJC30Q96LL9 226 aa7.12□□□□□ -1.27
SSBP1-210ENST00000481508 NAT8BQ9UHF3 227 aa7.12□□□□□ -1.27
SSBP1-210ENST00000481508 SMKR1H3BMG3 65 aa7.11□□□□□ -1.27
SSBP1-210ENST00000481508 DAZ4Q86SG3 579 aaKnown RBP7.11□□□□□ -1.27
SSBP1-210ENST00000481508 NIT1Q86X76 327 aa7.11□□□□□ -1.27
SSBP1-210ENST00000481508 BORCS7Q96B45 105 aa7.11□□□□□ -1.27
SSBP1-210ENST00000481508 TMEM191AQ9H0A3 160 aa7.11□□□□□ -1.27
SSBP1-210ENST00000481508 DAZ3Q9NR90 486 aaKnown RBP7.11□□□□□ -1.27
SSBP1-210ENST00000481508 A0A087WWC5 75 aa7.1□□□□□ -1.27
SSBP1-210ENST00000481508 TRBV6-8A0A0A6YYG3 113 aa7.1□□□□□ -1.27
SSBP1-210ENST00000481508 A0A1B0GXF2 115 aa7.1□□□□□ -1.27
SSBP1-210ENST00000481508 NCR2O95944 276 aa7.1□□□□□ -1.27
SSBP1-210ENST00000481508 RAB4AP20338 218 aa7.1□□□□□ -1.27
SSBP1-210ENST00000481508 RPS10P46783 165 aaKnown RBP7.1□□□□□ -1.27
SSBP1-210ENST00000481508 PNRC1Q12796 327 aaPredicted RBP7.1□□□□□ -1.27
SSBP1-210ENST00000481508 RIGQ13278 110 aa7.1□□□□□ -1.27
SSBP1-210ENST00000481508 MRPL54Q6P161 138 aaKnown RBP7.1□□□□□ -1.27
SSBP1-210ENST00000481508 NIT2Q9NQR4 276 aa7.1□□□□□ -1.27
SSBP1-210ENST00000481508 F8W036 122 aa7.09□□□□□ -1.27
SSBP1-210ENST00000481508 H7C1H1 209 aa7.09□□□□□ -1.27
SSBP1-210ENST00000481508 CAMPP49913 170 aa7.09□□□□□ -1.27
SSBP1-210ENST00000481508 SMIM15Q7Z3B0 74 aa7.09□□□□□ -1.27
SSBP1-210ENST00000481508 LRP1BQ9NZR2 4599 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms