RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	ATP5E	P56381	51 aa	Predicted RBP	0.32	□□□□□ -2.36
CCNL1-223	ENST00000481173	CATR1	Q13166	79 aa		0.32	□□□□□ -2.36
CCNL1-223	ENST00000481173	COX17	Q14061	63 aa		0.32	□□□□□ -2.36
CCNL1-223	ENST00000481173	C9orf153	Q5TBE3	101 aa		0.32	□□□□□ -2.36
CCNL1-223	ENST00000481173	SPINK6	Q6UWN8	80 aa		0.32	□□□□□ -2.36
CCNL1-223	ENST00000481173		Q6ZRX8	168 aa		0.32	□□□□□ -2.36
CCNL1-223	ENST00000481173	GTF2H5	Q6ZYL4	71 aa		0.32	□□□□□ -2.36
CCNL1-223	ENST00000481173	C5orf38	Q86SI9	138 aa		0.32	□□□□□ -2.36
CCNL1-223	ENST00000481173	UBE2DNL	Q8IWF7	75 aa		0.32	□□□□□ -2.36
CCNL1-223	ENST00000481173	WFDC6	Q9BQY6	131 aa		0.32	□□□□□ -2.36
CCNL1-223	ENST00000481173	UQCR10	Q9UDW1	63 aa		0.32	□□□□□ -2.36
CCNL1-223	ENST00000481173	LENEP	Q9Y5L5	61 aa		0.32	□□□□□ -2.36
CCNL1-223	ENST00000481173	IER3IP1	Q9Y5U9	82 aa		0.32	□□□□□ -2.36
CCNL1-223	ENST00000481173	FER1L6	Q2WGJ9	1857 aa		0.32	□□□□□ -2.36
CCNL1-223	ENST00000481173	ANKRD31	Q8N7Z5	1873 aa		0.32	□□□□□ -2.36
CCNL1-223	ENST00000481173	PHRF1	Q9P1Y6	1649 aa	Known RBP	0.31	□□□□□ -2.36
CCNL1-223	ENST00000481173	PIEZO1	Q92508	2521 aa		0.31	□□□□□ -2.36
CCNL1-223	ENST00000481173	PTPRM	P28827	1452 aa		0.31	□□□□□ -2.36
CCNL1-223	ENST00000481173	BDP1	A6H8Y1	2624 aa		0.31	□□□□□ -2.36
CCNL1-223	ENST00000481173	GVQW2	A0A096LPI5	108 aa	Predicted RBP	0.31	□□□□□ -2.36
CCNL1-223	ENST00000481173	TRAV1-2	A0A0B4J238	106 aa		0.31	□□□□□ -2.36
CCNL1-223	ENST00000481173	CTXND1	A0A1B0GTU2	59 aa		0.31	□□□□□ -2.36
CCNL1-223	ENST00000481173	UBE2L5P	A0A1B0GUS4	154 aa		0.31	□□□□□ -2.36
CCNL1-223	ENST00000481173	C20orf202	A1L168	122 aa		0.31	□□□□□ -2.36
CCNL1-223	ENST00000481173		F6UZH7	168 aa		0.31	□□□□□ -2.36
CCNL1-223	ENST00000481173	CORT	O00230	105 aa		0.31	□□□□□ -2.36
CCNL1-223	ENST00000481173	NMB	P08949	121 aa		0.31	□□□□□ -2.36
CCNL1-223	ENST00000481173	SPINK8	P0C7L1	97 aa		0.31	□□□□□ -2.36
CCNL1-223	ENST00000481173	IFITM1	P13164	125 aa		0.31	□□□□□ -2.36
CCNL1-223	ENST00000481173	S100A1	P23297	94 aa		0.31	□□□□□ -2.36
CCNL1-223	ENST00000481173	KRTDAP	P60985	99 aa		0.31	□□□□□ -2.36
CCNL1-223	ENST00000481173	PPP3R1	P63098	170 aa		0.31	□□□□□ -2.36
CCNL1-223	ENST00000481173	UBE2L3	P68036	154 aa	Known RBP	0.31	□□□□□ -2.36
CCNL1-223	ENST00000481173	DCD	P81605	110 aa	Known RBP	0.31	□□□□□ -2.36
CCNL1-223	ENST00000481173	SPAG11B	Q08648	103 aa		0.31	□□□□□ -2.36
CCNL1-223	ENST00000481173	TMEM170B	Q5T4T1	132 aa		0.31	□□□□□ -2.36
CCNL1-223	ENST00000481173	CFAP126	Q5VTH2	177 aa		0.31	□□□□□ -2.36
CCNL1-223	ENST00000481173	SPAG11A	Q6PDA7	123 aa		0.31	□□□□□ -2.36
CCNL1-223	ENST00000481173	COMMD6	Q7Z4G1	85 aa		0.31	□□□□□ -2.36
CCNL1-223	ENST00000481173		Q8N8P6	123 aa		0.31	□□□□□ -2.36
CCNL1-223	ENST00000481173	FAM213B	Q8TBF2	198 aa		0.31	□□□□□ -2.36
CCNL1-223	ENST00000481173	MGST2	Q99735	147 aa		0.31	□□□□□ -2.36
CCNL1-223	ENST00000481173	C2orf88	Q9BSF0	95 aa		0.31	□□□□□ -2.36
CCNL1-223	ENST00000481173	FAM103A1	Q9BTL3	118 aa	Known RBP	0.31	□□□□□ -2.36
CCNL1-223	ENST00000481173	SCN3B	Q9NY72	215 aa		0.31	□□□□□ -2.36
CCNL1-223	ENST00000481173		V9GYH0	126 aa		0.31	□□□□□ -2.36
CCNL1-223	ENST00000481173	MCM3AP	O60318	1980 aa		0.31	□□□□□ -2.36
CCNL1-223	ENST00000481173	JMJD1C	Q15652	2540 aa		0.31	□□□□□ -2.36
CCNL1-223	ENST00000481173	ADGRB1	O14514	1584 aa		0.31	□□□□□ -2.36
CCNL1-223	ENST00000481173	KIAA1549L	Q6ZVL6	1849 aa		0.31	□□□□□ -2.36
CCNL1-223	ENST00000481173	ZDBF2	Q9HCK1	2354 aa		0.31	□□□□□ -2.36
CCNL1-223	ENST00000481173	PTPRF	P10586	1907 aa		0.3	□□□□□ -2.36
CCNL1-223	ENST00000481173	ALPK3	Q96L96	1907 aa		0.3	□□□□□ -2.36
CCNL1-223	ENST00000481173	PPIP5K1	Q6PFW1	1433 aa		0.3	□□□□□ -2.36
CCNL1-223	ENST00000481173	CASKIN1	Q8WXD9	1431 aa		0.3	□□□□□ -2.36
CCNL1-223	ENST00000481173	TNRC6A	Q8NDV7	1962 aa	Known RBP	0.3	□□□□□ -2.36
CCNL1-223	ENST00000481173	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	0.3	□□□□□ -2.36
CCNL1-223	ENST00000481173	TRBV7-3	A0A075B6L6	115 aa		0.3	□□□□□ -2.36
CCNL1-223	ENST00000481173		A0A087WTM6	91 aa		0.3	□□□□□ -2.36
CCNL1-223	ENST00000481173		A0A1B0GV90	55 aa		0.3	□□□□□ -2.36
CCNL1-223	ENST00000481173	PHGR1	C9JFL3	82 aa		0.3	□□□□□ -2.36
CCNL1-223	ENST00000481173		M0R135	149 aa		0.3	□□□□□ -2.36
CCNL1-223	ENST00000481173	S100P	P25815	95 aa		0.3	□□□□□ -2.36
CCNL1-223	ENST00000481173	LSM10	Q969L4	123 aa	Known RBP	0.3	□□□□□ -2.36
CCNL1-223	ENST00000481173		Q96NJ1	140 aa		0.3	□□□□□ -2.36
CCNL1-223	ENST00000481173	TCEAL7	Q9BRU2	100 aa		0.3	□□□□□ -2.36
CCNL1-223	ENST00000481173	DYNLRB1	Q9NP97	96 aa		0.3	□□□□□ -2.36
CCNL1-223	ENST00000481173	FAIM	Q9NVQ4	179 aa		0.3	□□□□□ -2.36
CCNL1-223	ENST00000481173	CTTNBP2	Q8WZ74	1663 aa		0.3	□□□□□ -2.36
CCNL1-223	ENST00000481173	ZNF609	O15014	1411 aa		0.3	□□□□□ -2.36
CCNL1-223	ENST00000481173	PXDN	Q92626	1479 aa		0.29	□□□□□ -2.36
CCNL1-223	ENST00000481173	USP24	Q9UPU5	2620 aa		0.29	□□□□□ -2.36
CCNL1-223	ENST00000481173	LAMC3	Q9Y6N6	1575 aa		0.29	□□□□□ -2.36
CCNL1-223	ENST00000481173	LRRC37A3	O60309	1634 aa		0.29	□□□□□ -2.36
CCNL1-223	ENST00000481173	CLPSL1	A2RUU4	121 aa		0.29	□□□□□ -2.36
CCNL1-223	ENST00000481173	NAP1L6	A6NFF2	107 aa		0.29	□□□□□ -2.36
CCNL1-223	ENST00000481173		F8VRH5	84 aa		0.29	□□□□□ -2.36
CCNL1-223	ENST00000481173		H3BQ15	152 aa		0.29	□□□□□ -2.36
CCNL1-223	ENST00000481173	UQCR11	O14957	56 aa		0.29	□□□□□ -2.36
CCNL1-223	ENST00000481173	COX6C	P09669	75 aa		0.29	□□□□□ -2.36
CCNL1-223	ENST00000481173	CCL18	P55774	89 aa		0.29	□□□□□ -2.36
CCNL1-223	ENST00000481173	GNG11	P61952	73 aa		0.29	□□□□□ -2.36
CCNL1-223	ENST00000481173	BAGE2	Q86Y30	109 aa		0.29	□□□□□ -2.36
CCNL1-223	ENST00000481173	AMELX	Q99217	191 aa		0.29	□□□□□ -2.36
CCNL1-223	ENST00000481173	SPCS1	Q9Y6A9	102 aa		0.29	□□□□□ -2.36
CCNL1-223	ENST00000481173	CHD3	Q12873	2000 aa	Known RBP	0.29	□□□□□ -2.36
CCNL1-223	ENST00000481173	ZGRF1	Q86YA3	2104 aa		0.29	□□□□□ -2.36
CCNL1-223	ENST00000481173	ZNF462	Q96JM2	2506 aa		0.29	□□□□□ -2.36
CCNL1-223	ENST00000481173	LAMA4	Q16363	1823 aa		0.29	□□□□□ -2.36
CCNL1-223	ENST00000481173	CPSF1	Q10570	1443 aa	Known RBP	0.29	□□□□□ -2.36
CCNL1-223	ENST00000481173	A2ML1	A8K2U0	1454 aa		0.29	□□□□□ -2.36
CCNL1-223	ENST00000481173	SHANK2	Q9UPX8	1470 aa		0.29	□□□□□ -2.36
CCNL1-223	ENST00000481173	KCP	Q6ZWJ8	1503 aa		0.28	□□□□□ -2.36
CCNL1-223	ENST00000481173	TANC2	Q9HCD6	1990 aa		0.28	□□□□□ -2.36
CCNL1-223	ENST00000481173	BICRA	Q9NZM4	1560 aa		0.28	□□□□□ -2.36
CCNL1-223	ENST00000481173	RREB1	Q92766	1687 aa		0.28	□□□□□ -2.36
CCNL1-223	ENST00000481173	KNTC1	P50748	2209 aa		0.28	□□□□□ -2.36
CCNL1-223	ENST00000481173	OOSP1	A8MZH6	123 aa		0.28	□□□□□ -2.36
CCNL1-223	ENST00000481173	CHKB-CPT1B	H3BT56	60 aa		0.28	□□□□□ -2.36
CCNL1-223	ENST00000481173	SPINK1	P00995	79 aa		0.28	□□□□□ -2.36

Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms