RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 HSPG2P98160 4391 aa7.62□□□□□ -1.19
CCM2-213ENST00000480658 LRP1BQ9NZR2 4599 aa7.62□□□□□ -1.19
CCM2-213ENST00000480658 TRBV25-1A0A075B6N4 114 aa7.62□□□□□ -1.19
CCM2-213ENST00000480658 IGKV2D-24A0A075B6R9 120 aa7.62□□□□□ -1.19
CCM2-213ENST00000480658 TMEM262E9PQX1 116 aa7.62□□□□□ -1.19
CCM2-213ENST00000480658 RPL19P84098 196 aaKnown RBP7.62□□□□□ -1.19
CCM2-213ENST00000480658 MIAQ16674 131 aa7.62□□□□□ -1.19
CCM2-213ENST00000480658 ATRAIDQ6UW56 229 aa7.62□□□□□ -1.19
CCM2-213ENST00000480658 OR2D3Q8NGH3 330 aa7.62□□□□□ -1.19
CCM2-213ENST00000480658 MED9Q9NWA0 146 aa7.62□□□□□ -1.19
CCM2-213ENST00000480658 KRTAP10-1P60331 282 aa7.61□□□□□ -1.19
CCM2-213ENST00000480658 WDR73Q6P4I2 378 aa7.61□□□□□ -1.19
CCM2-213ENST00000480658 AKAP14Q86UN6 197 aa7.61□□□□□ -1.19
CCM2-213ENST00000480658 NEXN-AS1Q8NBZ9 246 aa7.61□□□□□ -1.19
CCM2-213ENST00000480658 UBE2WQ96B02 151 aa7.61□□□□□ -1.19
CCM2-213ENST00000480658 CHCHD5Q9BSY4 110 aa7.61□□□□□ -1.19
CCM2-213ENST00000480658 TPPP3Q9BW30 176 aa7.61□□□□□ -1.19
CCM2-213ENST00000480658 KLK12Q9UKR0 248 aa7.61□□□□□ -1.19
CCM2-213ENST00000480658 RYR1P21817 5038 aa7.61□□□□□ -1.19
CCM2-213ENST00000480658 C19orf71A6NCJ1 209 aa7.6□□□□□ -1.19
CCM2-213ENST00000480658 IGLC6P0CF74 106 aa7.6□□□□□ -1.19
CCM2-213ENST00000480658 XGP55808 180 aa7.6□□□□□ -1.19
CCM2-213ENST00000480658 BLOC1S1P78537 153 aa7.6□□□□□ -1.19
CCM2-213ENST00000480658 Q5VSD8 79 aa7.6□□□□□ -1.19
CCM2-213ENST00000480658 SMIM15Q7Z3B0 74 aa7.6□□□□□ -1.19
CCM2-213ENST00000480658 DERL1Q9BUN8 251 aa7.6□□□□□ -1.19
CCM2-213ENST00000480658 TMEM250H0YL14 139 aa7.59□□□□□ -1.19
CCM2-213ENST00000480658 NDUFS6O75380 124 aaKnown RBP7.59□□□□□ -1.19
CCM2-213ENST00000480658 TEX261Q6UWH6 196 aa7.59□□□□□ -1.19
CCM2-213ENST00000480658 KRTAP4-5Q9BYR2 181 aa7.59□□□□□ -1.19
CCM2-213ENST00000480658 DPH3P1Q9H4G8 78 aa7.59□□□□□ -1.19
CCM2-213ENST00000480658 IGHV1-24A0A0C4DH33 117 aa7.58□□□□□ -1.2
CCM2-213ENST00000480658 ANGP03950 147 aaKnown RBP7.58□□□□□ -1.2
CCM2-213ENST00000480658 MGPP08493 103 aa7.58□□□□□ -1.2
CCM2-213ENST00000480658 CTRLP40313 264 aa7.58□□□□□ -1.2
CCM2-213ENST00000480658 IQCJQ1A5X6 159 aa7.58□□□□□ -1.2
CCM2-213ENST00000480658 C9orf62Q8N4C0 152 aa7.58□□□□□ -1.2
CCM2-213ENST00000480658 PGLYRP4Q96LB8 373 aa7.58□□□□□ -1.2
CCM2-213ENST00000480658 FAM210AQ96ND0 272 aa7.58□□□□□ -1.2
CCM2-213ENST00000480658 CNFNQ9BYD5 112 aa7.58□□□□□ -1.2
CCM2-213ENST00000480658 Q9UF83 564 aa7.58□□□□□ -1.2
CCM2-213ENST00000480658 KIF25-AS1Q9Y6Z4 181 aa7.58□□□□□ -1.2
CCM2-213ENST00000480658 DNAH5Q8TE73 4624 aa7.57□□□□□ -1.2
CCM2-213ENST00000480658 M0QY20 66 aa7.57□□□□□ -1.2
CCM2-213ENST00000480658 IGLV2-8P01709 118 aa7.57□□□□□ -1.2
CCM2-213ENST00000480658 PLA2G1BP04054 148 aaKnown RBP7.57□□□□□ -1.2
CCM2-213ENST00000480658 INAFM2P0DMQ5 153 aa7.57□□□□□ -1.2
CCM2-213ENST00000480658 RASL11AQ6T310 242 aa7.57□□□□□ -1.2
CCM2-213ENST00000480658 C15orf54Q8N8G6 183 aa7.57□□□□□ -1.2
CCM2-213ENST00000480658 RPP21Q9H633 154 aaKnown RBP7.57□□□□□ -1.2
CCM2-213ENST00000480658 TRAV8-4A0A0B4J246 113 aa7.56□□□□□ -1.2
CCM2-213ENST00000480658 UBE2L6O14933 153 aa7.56□□□□□ -1.2
CCM2-213ENST00000480658 GZMBP10144 247 aa7.56□□□□□ -1.2
CCM2-213ENST00000480658 MPV17L2Q567V2 206 aa7.56□□□□□ -1.2
CCM2-213ENST00000480658 Q6ZSA8 131 aa7.56□□□□□ -1.2
CCM2-213ENST00000480658 Q8N3U1 123 aa7.56□□□□□ -1.2
CCM2-213ENST00000480658 BAALCQ8WXS3 180 aa7.56□□□□□ -1.2
CCM2-213ENST00000480658 BORCS7Q96B45 105 aa7.56□□□□□ -1.2
CCM2-213ENST00000480658 NIT2Q9NQR4 276 aa7.56□□□□□ -1.2
CCM2-213ENST00000480658 APOBP04114 4563 aaKnown RBP7.55□□□□□ -1.2
CCM2-213ENST00000480658 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.55□□□□□ -1.2
CCM2-213ENST00000480658 MUC21A0A0G2JKD1 596 aa7.55□□□□□ -1.2
CCM2-213ENST00000480658 MUC21A0A140T8X8 626 aa7.55□□□□□ -1.2
CCM2-213ENST00000480658 A0A1B0GUV1 79 aa7.55□□□□□ -1.2
CCM2-213ENST00000480658 RAB19A4D1S5 217 aa7.55□□□□□ -1.2
CCM2-213ENST00000480658 NTF3P20783 257 aa7.55□□□□□ -1.2
CCM2-213ENST00000480658 FUSP35637 526 aaKnown RBP eCLIP7.55□□□□□ -1.2
CCM2-213ENST00000480658 SSTP61278 116 aa7.55□□□□□ -1.2
CCM2-213ENST00000480658 TWIST1Q15672 202 aa7.55□□□□□ -1.2
CCM2-213ENST00000480658 CT83Q5H943 113 aa7.55□□□□□ -1.2
CCM2-213ENST00000480658 SUMO4Q6EEV6 95 aa7.55□□□□□ -1.2
CCM2-213ENST00000480658 LYZL1Q6UWQ5 148 aa7.55□□□□□ -1.2
CCM2-213ENST00000480658 TMEM243Q9BU79 118 aa7.55□□□□□ -1.2
CCM2-213ENST00000480658 PRR34Q9NV39 138 aa7.55□□□□□ -1.2
CCM2-213ENST00000480658 TRBV20OR9-2A0A075B6H5 130 aa7.54□□□□□ -1.2
CCM2-213ENST00000480658 LECT2O14960 151 aa7.54□□□□□ -1.2
CCM2-213ENST00000480658 COTL1Q14019 142 aa7.54□□□□□ -1.2
CCM2-213ENST00000480658 DGAT2L7PQ6IED9 249 aa7.54□□□□□ -1.2
CCM2-213ENST00000480658 FAM231DQ6ZW35 169 aa7.54□□□□□ -1.2
CCM2-213ENST00000480658 CLRN3Q8NCR9 226 aa7.54□□□□□ -1.2
CCM2-213ENST00000480658 NUDT10Q8NFP7 164 aa7.54□□□□□ -1.2
CCM2-213ENST00000480658 NUDT11Q96G61 164 aa7.54□□□□□ -1.2
CCM2-213ENST00000480658 A8MWL6 223 aa7.53□□□□□ -1.2
CCM2-213ENST00000480658 NCR2O95944 276 aa7.53□□□□□ -1.2
CCM2-213ENST00000480658 HLA-DQA1P01909 254 aa7.53□□□□□ -1.2
CCM2-213ENST00000480658 RBX1P62877 108 aa7.53□□□□□ -1.2
CCM2-213ENST00000480658 ENHOQ6UWT2 76 aa7.53□□□□□ -1.2
CCM2-213ENST00000480658 LYPD6BQ8NI32 183 aa7.53□□□□□ -1.2
CCM2-213ENST00000480658 FAM231BA6NCW3 169 aa7.52□□□□□ -1.21
CCM2-213ENST00000480658 H7C423 109 aa7.52□□□□□ -1.21
CCM2-213ENST00000480658 NKX2-5P52952 324 aaPredicted RBP7.52□□□□□ -1.21
CCM2-213ENST00000480658 REG3AQ06141 175 aa7.52□□□□□ -1.21
CCM2-213ENST00000480658 WFDC2Q14508 124 aa7.52□□□□□ -1.21
CCM2-213ENST00000480658 LINC00269Q8N2A0 174 aa7.52□□□□□ -1.21
CCM2-213ENST00000480658 GFRA4Q9GZZ7 299 aa7.52□□□□□ -1.21
CCM2-213ENST00000480658 ABCA13Q86UQ4 5058 aa7.52□□□□□ -1.21
CCM2-213ENST00000480658 AMTP48728 403 aa7.51□□□□□ -1.21
CCM2-213ENST00000480658 GAGE6Q13070 117 aa7.51□□□□□ -1.21
CCM2-213ENST00000480658 ALKAL2Q6UX46 152 aa7.51□□□□□ -1.21
CCM2-213ENST00000480658 NTM-AS1Q6ZSK4 140 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms