RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 RHOHQ15669 191 aa8.41□□□□□ -1.06
TRA2B-212ENST00000480461 ZNF56Q15929 161 aa8.41□□□□□ -1.06
TRA2B-212ENST00000480461 MRPL54Q6P161 138 aaKnown RBP8.41□□□□□ -1.06
TRA2B-212ENST00000480461 GATD1Q8NB37 220 aa8.41□□□□□ -1.06
TRA2B-212ENST00000480461 CTDSP1Q9GZU7 261 aa8.41□□□□□ -1.06
TRA2B-212ENST00000480461 TMEM191AQ9H0A3 160 aa8.41□□□□□ -1.06
TRA2B-212ENST00000480461 A0A087WWC5 75 aa8.4□□□□□ -1.06
TRA2B-212ENST00000480461 RAB4AP20338 218 aa8.4□□□□□ -1.06
TRA2B-212ENST00000480461 CAMPP49913 170 aa8.4□□□□□ -1.06
TRA2B-212ENST00000480461 NEGR1Q7Z3B1 354 aa8.4□□□□□ -1.06
TRA2B-212ENST00000480461 NEXN-AS1Q8NBZ9 246 aa8.4□□□□□ -1.06
TRA2B-212ENST00000480461 ZNRF2Q8NHG8 242 aa8.4□□□□□ -1.06
TRA2B-212ENST00000480461 RPS10P5Q9NQ39 176 aa8.4□□□□□ -1.06
TRA2B-212ENST00000480461 TMEM242Q9NWH2 141 aa8.4□□□□□ -1.06
TRA2B-212ENST00000480461 DYNC1H1Q14204 4646 aaKnown RBP8.4□□□□□ -1.07
TRA2B-212ENST00000480461 DNAH11Q96DT5 4516 aa8.39□□□□□ -1.07
TRA2B-212ENST00000480461 SRIP30626 198 aa8.39□□□□□ -1.07
TRA2B-212ENST00000480461 AMN1Q8IY45 258 aa8.39□□□□□ -1.07
TRA2B-212ENST00000480461 BORCS7Q96B45 105 aa8.39□□□□□ -1.07
TRA2B-212ENST00000480461 IMMP2LQ96T52 175 aa8.39□□□□□ -1.07
TRA2B-212ENST00000480461 KRTAP4-5Q9BYR2 181 aa8.39□□□□□ -1.07
TRA2B-212ENST00000480461 TRBV7-3A0A075B6L6 115 aa8.38□□□□□ -1.07
TRA2B-212ENST00000480461 TRBV10-1A0A0K0K1A3 114 aa8.38□□□□□ -1.07
TRA2B-212ENST00000480461 UBE2D3P61077 147 aa8.38□□□□□ -1.07
TRA2B-212ENST00000480461 UBE2D2P62837 147 aa8.38□□□□□ -1.07
TRA2B-212ENST00000480461 RHEBQ15382 184 aa8.38□□□□□ -1.07
TRA2B-212ENST00000480461 NDUFA5Q16718 116 aa8.38□□□□□ -1.07
TRA2B-212ENST00000480461 ATP6V0E2Q8NHE4 81 aa8.38□□□□□ -1.07
TRA2B-212ENST00000480461 DNAH17Q9UFH2 4485 aa8.38□□□□□ -1.07
TRA2B-212ENST00000480461 A0A1B0GVY2 172 aa8.37□□□□□ -1.07
TRA2B-212ENST00000480461 CCL18P55774 89 aa8.37□□□□□ -1.07
TRA2B-212ENST00000480461 FAM104BQ5XKR9 115 aa8.37□□□□□ -1.07
TRA2B-212ENST00000480461 RASL11AQ6T310 242 aa8.37□□□□□ -1.07
TRA2B-212ENST00000480461 SVBPQ8N300 66 aa8.37□□□□□ -1.07
TRA2B-212ENST00000480461 RPL39LQ96EH5 51 aaKnown RBP8.37□□□□□ -1.07
TRA2B-212ENST00000480461 URGCP-MRPS24S4R325 110 aa8.37□□□□□ -1.07
TRA2B-212ENST00000480461 PKD1P98161 4303 aa8.36□□□□□ -1.07
TRA2B-212ENST00000480461 IGHV3-38A0A0C4DH36 116 aa8.36□□□□□ -1.07
TRA2B-212ENST00000480461 SMKR1H3BMG3 65 aa8.36□□□□□ -1.07
TRA2B-212ENST00000480461 RPS10P46783 165 aaKnown RBP8.36□□□□□ -1.07
TRA2B-212ENST00000480461 HBBP68871 147 aa8.36□□□□□ -1.07
TRA2B-212ENST00000480461 MRPL51Q4U2R6 128 aaKnown RBP8.36□□□□□ -1.07
TRA2B-212ENST00000480461 SMIM15Q7Z3B0 74 aa8.36□□□□□ -1.07
TRA2B-212ENST00000480461 DEFB104AQ8WTQ1 72 aa8.36□□□□□ -1.07
TRA2B-212ENST00000480461 BTF3L4Q96K17 158 aa8.36□□□□□ -1.07
TRA2B-212ENST00000480461 GTSF1LQ9H1H1 148 aa8.36□□□□□ -1.07
TRA2B-212ENST00000480461 NIT2Q9NQR4 276 aa8.36□□□□□ -1.07
TRA2B-212ENST00000480461 MRPS16Q9Y3D3 137 aaKnown RBP8.36□□□□□ -1.07
TRA2B-212ENST00000480461 A0A1B0GW15 77 aa8.35□□□□□ -1.07
TRA2B-212ENST00000480461 SNAPINO95295 136 aa8.35□□□□□ -1.07
TRA2B-212ENST00000480461 TIRAPP58753 221 aa8.35□□□□□ -1.07
TRA2B-212ENST00000480461 RPL36AP83881 106 aaKnown RBP8.35□□□□□ -1.07
TRA2B-212ENST00000480461 NTM-AS1Q6ZSK4 140 aa8.35□□□□□ -1.07
TRA2B-212ENST00000480461 SH2D6Q7Z4S9 175 aa8.35□□□□□ -1.07
TRA2B-212ENST00000480461 ATP5L2Q7Z4Y8 100 aa8.35□□□□□ -1.07
TRA2B-212ENST00000480461 RPL36ALQ969Q0 106 aaKnown RBP8.35□□□□□ -1.07
TRA2B-212ENST00000480461 YPEL4Q96NS1 127 aa8.35□□□□□ -1.07
TRA2B-212ENST00000480461 HSPG2P98160 4391 aa8.35□□□□□ -1.07
TRA2B-212ENST00000480461 NCR2O95944 276 aa8.34□□□□□ -1.07
TRA2B-212ENST00000480461 LINC00336Q6ZUF6 198 aa8.34□□□□□ -1.07
TRA2B-212ENST00000480461 UBE2DNLQ8IWF7 75 aa8.34□□□□□ -1.07
TRA2B-212ENST00000480461 NRACQ8N912 160 aa8.34□□□□□ -1.07
TRA2B-212ENST00000480461 DNAJC30Q96LL9 226 aa8.34□□□□□ -1.07
TRA2B-212ENST00000480461 UPK3BQ9BT76 320 aa8.34□□□□□ -1.07
TRA2B-212ENST00000480461 Q9H8V8 135 aa8.34□□□□□ -1.07
TRA2B-212ENST00000480461 IGLV2-18A0A075B6J9 118 aa8.33□□□□□ -1.08
TRA2B-212ENST00000480461 H7C1H1 209 aa8.33□□□□□ -1.08
TRA2B-212ENST00000480461 TMEM136Q6ZRR5 245 aa8.33□□□□□ -1.08
TRA2B-212ENST00000480461 WFDC10BQ8IUB3 73 aa8.33□□□□□ -1.08
TRA2B-212ENST00000480461 FRZBQ92765 325 aa8.33□□□□□ -1.08
TRA2B-212ENST00000480461 MRAP2Q96G30 205 aa8.33□□□□□ -1.08
TRA2B-212ENST00000480461 TNFRSF18Q9Y5U5 241 aa8.33□□□□□ -1.08
TRA2B-212ENST00000480461 TRAV9-1A0A075B6T8 112 aa8.32□□□□□ -1.08
TRA2B-212ENST00000480461 TGIF2-C20orf24A0A0A6YYL0 155 aa8.32□□□□□ -1.08
TRA2B-212ENST00000480461 TRBV6-5A0A0K0K1A5 114 aa8.32□□□□□ -1.08
TRA2B-212ENST00000480461 ELOBQ15370 118 aa8.32□□□□□ -1.08
TRA2B-212ENST00000480461 LELP1Q5T871 98 aa8.32□□□□□ -1.08
TRA2B-212ENST00000480461 KCNIP4Q6PIL6 250 aa8.32□□□□□ -1.08
TRA2B-212ENST00000480461 Q8N3U1 123 aa8.32□□□□□ -1.08
TRA2B-212ENST00000480461 KRTAP1-5Q9BYS1 174 aa8.32□□□□□ -1.08
TRA2B-212ENST00000480461 M0R2N4 97 aa8.31□□□□□ -1.08
TRA2B-212ENST00000480461 S100A8P05109 93 aa8.31□□□□□ -1.08
TRA2B-212ENST00000480461 S100PP25815 95 aa8.31□□□□□ -1.08
TRA2B-212ENST00000480461 POLR2KP53803 58 aaKnown RBP8.31□□□□□ -1.08
TRA2B-212ENST00000480461 Q6ZR54 194 aa8.31□□□□□ -1.08
TRA2B-212ENST00000480461 DAZ4Q86SG3 579 aaKnown RBP8.31□□□□□ -1.08
TRA2B-212ENST00000480461 DAZ3Q9NR90 486 aaKnown RBP8.31□□□□□ -1.08
TRA2B-212ENST00000480461 TRBV6-8A0A0A6YYG3 113 aa8.3□□□□□ -1.08
TRA2B-212ENST00000480461 D6R8Y8 96 aa8.3□□□□□ -1.08
TRA2B-212ENST00000480461 OR10J3Q5JRS4 329 aa8.3□□□□□ -1.08
TRA2B-212ENST00000480461 CBLN2Q8IUK8 224 aa8.3□□□□□ -1.08
TRA2B-212ENST00000480461 TRBV24-1A0A075B6N3 115 aa8.29□□□□□ -1.08
TRA2B-212ENST00000480461 SDHAF1A6NFY7 115 aa8.29□□□□□ -1.08
TRA2B-212ENST00000480461 SIVA1O15304 175 aa8.29□□□□□ -1.08
TRA2B-212ENST00000480461 TNFRSF6BO95407 300 aa8.29□□□□□ -1.08
TRA2B-212ENST00000480461 NPYP01303 97 aa8.29□□□□□ -1.08
TRA2B-212ENST00000480461 CKS2P33552 79 aa8.29□□□□□ -1.08
TRA2B-212ENST00000480461 TMEM70Q9BUB7 260 aa8.29□□□□□ -1.08
TRA2B-212ENST00000480461 NBDYA0A0U1RRE5 68 aa8.28□□□□□ -1.08
TRA2B-212ENST00000480461 DNAH10OSP0CZ25 163 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms