RNA–Protein interactions for RNA: ENST00000480227.5

PKD1-213, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 1 (best)

Gene PKD1, Length 2,353 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-213ENST00000480227 VPS25Q9BRG1 176 aa12.64□□□□□ -0.39
PKD1-213ENST00000480227 IGLV4-69A0A075B6H9 119 aa12.63□□□□□ -0.39
PKD1-213ENST00000480227 TRBV27A0A0K0K1C4 114 aa12.63□□□□□ -0.39
PKD1-213ENST00000480227 KHDC1LQ5JSQ8 128 aa12.63□□□□□ -0.39
PKD1-213ENST00000480227 KLHL30-AS1Q8NEE0 82 aa12.63□□□□□ -0.39
PKD1-213ENST00000480227 ZNF815PA8K554 130 aa12.63□□□□□ -0.39
PKD1-213ENST00000480227 C12orf74Q32Q52 190 aa12.63□□□□□ -0.39
PKD1-213ENST00000480227 OR5A1Q8NGJ0 315 aa12.63□□□□□ -0.39
PKD1-213ENST00000480227 TRBV7-3A0A075B6L6 115 aa12.62□□□□□ -0.39
PKD1-213ENST00000480227 PRM2P04554 102 aa12.62□□□□□ -0.39
PKD1-213ENST00000480227 DEFB131AP59861 70 aa12.62□□□□□ -0.39
PKD1-213ENST00000480227 PMVKQ15126 192 aa12.62□□□□□ -0.39
PKD1-213ENST00000480227 KRTAP1-3Q8IUG1 177 aa12.62□□□□□ -0.39
PKD1-213ENST00000480227 K7ERU9 68 aa12.62□□□□□ -0.39
PKD1-213ENST00000480227 SCGB1D4Q6XE38 83 aa12.62□□□□□ -0.39
PKD1-213ENST00000480227 ACANP16112 2415 aa12.61□□□□□ -0.39
PKD1-213ENST00000480227 TRBV6-5A0A0K0K1A5 114 aa12.61□□□□□ -0.39
PKD1-213ENST00000480227 PLEKHB2Q96CS7 222 aa12.61□□□□□ -0.39
PKD1-213ENST00000480227 IGLL5B9A064 214 aa12.61□□□□□ -0.39
PKD1-213ENST00000480227 OPRPNQ99935 248 aaPredicted RBP12.61□□□□□ -0.39
PKD1-213ENST00000480227 TMEM141Q96I45 108 aa12.6□□□□□ -0.39
PKD1-213ENST00000480227 NACAE9PAV3 2078 aa12.6□□□□□ -0.39
PKD1-213ENST00000480227 NIPBLQ6KC79 2804 aaeCLIP12.6□□□□□ -0.39
PKD1-213ENST00000480227 IGHV3-73A0A0B4J1V6 119 aa12.59□□□□□ -0.39
PKD1-213ENST00000480227 RIPPLY3P57055 190 aa12.59□□□□□ -0.39
PKD1-213ENST00000480227 TMEM61Q8N0U2 210 aa12.59□□□□□ -0.39
PKD1-213ENST00000480227 Q8N2B8 174 aa12.59□□□□□ -0.39
PKD1-213ENST00000480227 TIMM17AQ99595 171 aa12.59□□□□□ -0.39
PKD1-213ENST00000480227 HELZ2Q9BYK8 2649 aaKnown RBP12.59□□□□□ -0.39
PKD1-213ENST00000480227 LINC01619G3V211 115 aa12.59□□□□□ -0.39
PKD1-213ENST00000480227 TMEM170BQ5T4T1 132 aa12.59□□□□□ -0.39
PKD1-213ENST00000480227 TRPT1Q86TN4 253 aaKnown RBP12.59□□□□□ -0.39
PKD1-213ENST00000480227 LRRC75A-AS1Q8N1F1 130 aa12.59□□□□□ -0.39
PKD1-213ENST00000480227 ZNF479Q96JC4 524 aa12.59□□□□□ -0.39
PKD1-213ENST00000480227 NOTCH3Q9UM47 2321 aa12.59□□□□□ -0.39
PKD1-213ENST00000480227 RBMY1BA6NDE4 496 aaKnown RBP12.58□□□□□ -0.4
PKD1-213ENST00000480227 RBMY1EA6NEQ0 496 aaKnown RBP12.58□□□□□ -0.4
PKD1-213ENST00000480227 LINC01549A6NIU2 74 aa12.58□□□□□ -0.4
PKD1-213ENST00000480227 RBMY1DP0C7P1 496 aaKnown RBP12.58□□□□□ -0.4
PKD1-213ENST00000480227 TRGV11A0A075B6L2 103 aa12.58□□□□□ -0.4
PKD1-213ENST00000480227 ZNRF2Q8NHG8 242 aa12.58□□□□□ -0.4
PKD1-213ENST00000480227 DLX4Q92988 240 aaPredicted RBP12.58□□□□□ -0.4
PKD1-213ENST00000480227 MTORP42345 2549 aa12.57□□□□□ -0.4
PKD1-213ENST00000480227 P0DMU3 169 aa12.57□□□□□ -0.4
PKD1-213ENST00000480227 FAM231AP0DMU4 169 aa12.57□□□□□ -0.4
PKD1-213ENST00000480227 FAM231CP0DMU5 169 aa12.57□□□□□ -0.4
PKD1-213ENST00000480227 SRSF9Q13242 221 aaKnown RBP eCLIP12.57□□□□□ -0.4
PKD1-213ENST00000480227 PAPPA-AS1Q5QFB9 102 aa12.57□□□□□ -0.4
PKD1-213ENST00000480227 GCN1Q92616 2671 aaKnown RBP12.56□□□□□ -0.4
PKD1-213ENST00000480227 H3BMM0 161 aa12.56□□□□□ -0.4
PKD1-213ENST00000480227 HERVK_113P61574 105 aa12.56□□□□□ -0.4
PKD1-213ENST00000480227 PROK1P58294 105 aa12.56□□□□□ -0.4
PKD1-213ENST00000480227 HIST2H2BCQ6DN03 193 aa12.56□□□□□ -0.4
PKD1-213ENST00000480227 WFDC11Q8NEX6 87 aa12.56□□□□□ -0.4
PKD1-213ENST00000480227 C4orf3Q8WVX3 66 aa12.56□□□□□ -0.4
PKD1-213ENST00000480227 C11orf44Q8N8P7 122 aa12.55□□□□□ -0.4
PKD1-213ENST00000480227 I3L3M4 83 aa12.55□□□□□ -0.4
PKD1-213ENST00000480227 TSPEAR-AS2P59090 65 aa12.55□□□□□ -0.4
PKD1-213ENST00000480227 NSUN5P1Q3KNT7 163 aa12.55□□□□□ -0.4
PKD1-213ENST00000480227 ITPR2Q14571 2701 aa12.54□□□□□ -0.4
PKD1-213ENST00000480227 RHOHQ15669 191 aa12.54□□□□□ -0.4
PKD1-213ENST00000480227 PEMTQ9UBM1 199 aa12.54□□□□□ -0.4
PKD1-213ENST00000480227 RRN3P1Q2M238 152 aa12.54□□□□□ -0.4
PKD1-213ENST00000480227 JMJD1CQ15652 2540 aa12.53□□□□□ -0.4
PKD1-213ENST00000480227 H3BMG7 143 aa12.53□□□□□ -0.4
PKD1-213ENST00000480227 RPL24P83731 157 aaKnown RBP12.53□□□□□ -0.4
PKD1-213ENST00000480227 Q6ZSV7 163 aa12.53□□□□□ -0.4
PKD1-213ENST00000480227 C20orf203Q8NBC4 194 aa12.53□□□□□ -0.4
PKD1-213ENST00000480227 DYNLRB2Q8TF09 96 aa12.53□□□□□ -0.4
PKD1-213ENST00000480227 A0A1B0GWB2 263 aa12.52□□□□□ -0.4
PKD1-213ENST00000480227 MAP6D1Q9H9H5 199 aa12.52□□□□□ -0.4
PKD1-213ENST00000480227 Q9UF83 564 aa12.51□□□□□ -0.41
PKD1-213ENST00000480227 A0A0J9YY99 117 aa12.51□□□□□ -0.41
PKD1-213ENST00000480227 G3V4G9 280 aa12.51□□□□□ -0.41
PKD1-213ENST00000480227 PGPEP1Q9NXJ5 209 aa12.51□□□□□ -0.41
PKD1-213ENST00000480227 IGHV3-64A0A075B6Q5 118 aa12.5□□□□□ -0.41
PKD1-213ENST00000480227 A0A1W2PRX2 142 aa12.5□□□□□ -0.41
PKD1-213ENST00000480227 A8MTW9 85 aa12.5□□□□□ -0.41
PKD1-213ENST00000480227 DEFB114Q30KQ6 69 aa12.5□□□□□ -0.41
PKD1-213ENST00000480227 MRPL16Q9NX20 251 aaKnown RBP12.5□□□□□ -0.41
PKD1-213ENST00000480227 PDZD2O15018 2839 aa12.5□□□□□ -0.41
PKD1-213ENST00000480227 DNAJC9-AS1A6NH13 148 aa12.5□□□□□ -0.41
PKD1-213ENST00000480227 MTURNQ8N3F0 131 aa12.5□□□□□ -0.41
PKD1-213ENST00000480227 J3QQQ9 107 aa12.49□□□□□ -0.41
PKD1-213ENST00000480227 SFTA2Q6UW10 78 aa12.49□□□□□ -0.41
PKD1-213ENST00000480227 SPAG8Q99932 426 aaPredicted RBP12.49□□□□□ -0.41
PKD1-213ENST00000480227 ANK3Q12955 4377 aaKnown RBP12.49□□□□□ -0.41
PKD1-213ENST00000480227 TMEM238LA0A1B0GVL6 79 aa12.49□□□□□ -0.41
PKD1-213ENST00000480227 A6NJY4 79 aa12.49□□□□□ -0.41
PKD1-213ENST00000480227 APOMO95445 188 aa12.49□□□□□ -0.41
PKD1-213ENST00000480227 LGALS3P17931 250 aaKnown RBP12.49□□□□□ -0.41
PKD1-213ENST00000480227 WFDC2Q14508 124 aa12.49□□□□□ -0.41
PKD1-213ENST00000480227 LINC01587Q99440 93 aa12.49□□□□□ -0.41
PKD1-213ENST00000480227 VCX2Q9H322 139 aa12.49□□□□□ -0.41
PKD1-213ENST00000480227 SETXQ7Z333 2677 aaKnown RBP12.49□□□□□ -0.41
PKD1-213ENST00000480227 IGLV4-3A0A075B6K6 122 aa12.48□□□□□ -0.41
PKD1-213ENST00000480227 A0A0J9YXV3 536 aa12.48□□□□□ -0.41
PKD1-213ENST00000480227 TEX48A0A1B0GUV7 120 aa12.48□□□□□ -0.41
PKD1-213ENST00000480227 M0R2P5 195 aa12.48□□□□□ -0.41
PKD1-213ENST00000480227 CEMP1Q6PRD7 247 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms