RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 DNAH6Q9C0G6 4158 aa13.53□□□□□ -0.24
LIME1-205ENST00000480139 RASL11AQ6T310 242 aa13.53□□□□□ -0.24
LIME1-205ENST00000480139 CTDSP1Q9GZU7 261 aa13.53□□□□□ -0.24
LIME1-205ENST00000480139 SIVA1O15304 175 aa13.52□□□□□ -0.25
LIME1-205ENST00000480139 LELP1Q5T871 98 aa13.52□□□□□ -0.25
LIME1-205ENST00000480139 Q6ZR54 194 aa13.52□□□□□ -0.25
LIME1-205ENST00000480139 ATP5L2Q7Z4Y8 100 aa13.52□□□□□ -0.25
LIME1-205ENST00000480139 A0A087WWC5 75 aa13.51□□□□□ -0.25
LIME1-205ENST00000480139 GATD1Q8NB37 220 aa13.51□□□□□ -0.25
LIME1-205ENST00000480139 IMMP2LQ96T52 175 aa13.51□□□□□ -0.25
LIME1-205ENST00000480139 NIT2Q9NQR4 276 aa13.51□□□□□ -0.25
LIME1-205ENST00000480139 IGLV2-18A0A075B6J9 118 aa13.5□□□□□ -0.25
LIME1-205ENST00000480139 NBDYA0A0U1RRE5 68 aa13.5□□□□□ -0.25
LIME1-205ENST00000480139 A0A1B0GXF2 115 aa13.5□□□□□ -0.25
LIME1-205ENST00000480139 S100A8P05109 93 aa13.5□□□□□ -0.25
LIME1-205ENST00000480139 HBBP68871 147 aa13.5□□□□□ -0.25
LIME1-205ENST00000480139 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.5□□□□□ -0.25
LIME1-205ENST00000480139 TMEM242Q9NWH2 141 aa13.5□□□□□ -0.25
LIME1-205ENST00000480139 TNFRSF18Q9Y5U5 241 aa13.5□□□□□ -0.25
LIME1-205ENST00000480139 TRAV8-6A0A0B4J262 113 aa13.49□□□□□ -0.25
LIME1-205ENST00000480139 RHEBQ15382 184 aa13.49□□□□□ -0.25
LIME1-205ENST00000480139 TTC32Q5I0X7 151 aa13.49□□□□□ -0.25
LIME1-205ENST00000480139 DAZ4Q86SG3 579 aaKnown RBP13.49□□□□□ -0.25
LIME1-205ENST00000480139 DAZ3Q9NR90 486 aaKnown RBP13.49□□□□□ -0.25
LIME1-205ENST00000480139 TRAV26-2A0A0B4J265 109 aa13.48□□□□□ -0.25
LIME1-205ENST00000480139 RAB4AP20338 218 aa13.48□□□□□ -0.25
LIME1-205ENST00000480139 MRPL54Q6P161 138 aaKnown RBP13.48□□□□□ -0.25
LIME1-205ENST00000480139 WFDC10BQ8IUB3 73 aa13.48□□□□□ -0.25
LIME1-205ENST00000480139 CLRN3Q8NCR9 226 aa13.48□□□□□ -0.25
LIME1-205ENST00000480139 RNF185Q96GF1 192 aa13.48□□□□□ -0.25
LIME1-205ENST00000480139 K7EP13 123 aa13.47□□□□□ -0.25
LIME1-205ENST00000480139 DNAH10OSP0CZ25 163 aa13.47□□□□□ -0.25
LIME1-205ENST00000480139 CAMPP49913 170 aa13.47□□□□□ -0.25
LIME1-205ENST00000480139 NDUFA5Q16718 116 aa13.47□□□□□ -0.25
LIME1-205ENST00000480139 TMEM97Q5BJF2 176 aa13.47□□□□□ -0.25
LIME1-205ENST00000480139 OR10J3Q5JRS4 329 aa13.47□□□□□ -0.25
LIME1-205ENST00000480139 AMN1Q8IY45 258 aa13.47□□□□□ -0.25
LIME1-205ENST00000480139 MRAP2Q96G30 205 aa13.47□□□□□ -0.25
LIME1-205ENST00000480139 C7orf77A4D0Y5 90 aa13.46□□□□□ -0.25
LIME1-205ENST00000480139 FAM104BQ5XKR9 115 aa13.46□□□□□ -0.25
LIME1-205ENST00000480139 BTF3L4Q96K17 158 aa13.46□□□□□ -0.25
LIME1-205ENST00000480139 TRAV9-1A0A075B6T8 112 aa13.45□□□□□ -0.26
LIME1-205ENST00000480139 IGHV3-38A0A0C4DH36 116 aa13.45□□□□□ -0.26
LIME1-205ENST00000480139 M0R2N4 97 aa13.45□□□□□ -0.26
LIME1-205ENST00000480139 KCNIP4Q6PIL6 250 aa13.45□□□□□ -0.26
LIME1-205ENST00000480139 TRBV6-8A0A0A6YYG3 113 aa13.44□□□□□ -0.26
LIME1-205ENST00000480139 TRBV6-5A0A0K0K1A5 114 aa13.44□□□□□ -0.26
LIME1-205ENST00000480139 APOC3P02656 99 aa13.44□□□□□ -0.26
LIME1-205ENST00000480139 BTF3P20290 206 aaKnown RBP13.44□□□□□ -0.26
LIME1-205ENST00000480139 LINC01556Q5JQF7 62 aa13.44□□□□□ -0.26
LIME1-205ENST00000480139 SVBPQ8N300 66 aa13.44□□□□□ -0.26
LIME1-205ENST00000480139 RPL39LQ96EH5 51 aaKnown RBP13.43□□□□□ -0.26
LIME1-205ENST00000480139 KRTAP1-5Q9BYS1 174 aa13.43□□□□□ -0.26
LIME1-205ENST00000480139 TRAV9-2A0A087WT02 112 aa13.42□□□□□ -0.26
LIME1-205ENST00000480139 SNAPINO95295 136 aa13.42□□□□□ -0.26
LIME1-205ENST00000480139 PPP1R17O96001 155 aa13.42□□□□□ -0.26
LIME1-205ENST00000480139 S100PP25815 95 aa13.41□□□□□ -0.26
LIME1-205ENST00000480139 MRPL51Q4U2R6 128 aaKnown RBP13.41□□□□□ -0.26
LIME1-205ENST00000480139 RPS10P5Q9NQ39 176 aa13.41□□□□□ -0.26
LIME1-205ENST00000480139 GAS8-AS1O95177 125 aa13.4□□□□□ -0.26
LIME1-205ENST00000480139 NTM-AS1Q6ZSK4 140 aa13.4□□□□□ -0.26
LIME1-205ENST00000480139 C10orf126Q8N4M7 172 aa13.4□□□□□ -0.26
LIME1-205ENST00000480139 SDHAF1A6NFY7 115 aa13.39□□□□□ -0.27
LIME1-205ENST00000480139 IQCJQ1A5X6 159 aa13.39□□□□□ -0.27
LIME1-205ENST00000480139 C1orf134Q5TEV5 83 aa13.39□□□□□ -0.27
LIME1-205ENST00000480139 NIT1Q86X76 327 aa13.39□□□□□ -0.27
LIME1-205ENST00000480139 SLC7A5P1Q8MH63 180 aa13.39□□□□□ -0.27
LIME1-205ENST00000480139 CHCHD7Q9BUK0 85 aa13.39□□□□□ -0.27
LIME1-205ENST00000480139 TRBV25-1A0A075B6N4 114 aa13.38□□□□□ -0.27
LIME1-205ENST00000480139 PPBPP02775 128 aa13.38□□□□□ -0.27
LIME1-205ENST00000480139 RPS10P46783 165 aaKnown RBP13.38□□□□□ -0.27
LIME1-205ENST00000480139 C6orf223Q8N319 242 aa13.38□□□□□ -0.27
LIME1-205ENST00000480139 NRACQ8N912 160 aa13.38□□□□□ -0.27
LIME1-205ENST00000480139 ST20Q9HBF5 79 aa13.38□□□□□ -0.27
LIME1-205ENST00000480139 IGHV1-24A0A0C4DH33 117 aa13.37□□□□□ -0.27
LIME1-205ENST00000480139 SMKR1H3BMG3 65 aa13.37□□□□□ -0.27
LIME1-205ENST00000480139 NCR2O95944 276 aa13.37□□□□□ -0.27
LIME1-205ENST00000480139 PKIAP61925 76 aa13.37□□□□□ -0.27
LIME1-205ENST00000480139 COTL1Q14019 142 aa13.37□□□□□ -0.27
LIME1-205ENST00000480139 TMEM70Q9BUB7 260 aa13.37□□□□□ -0.27
LIME1-205ENST00000480139 DNAH2Q9P225 4427 aa13.36□□□□□ -0.27
LIME1-205ENST00000480139 TRBV24-1A0A075B6N3 115 aa13.36□□□□□ -0.27
LIME1-205ENST00000480139 CKS2P33552 79 aa13.36□□□□□ -0.27
LIME1-205ENST00000480139 POLR2KP53803 58 aaKnown RBP13.36□□□□□ -0.27
LIME1-205ENST00000480139 TRBV27A0A0K0K1C4 114 aa13.35□□□□□ -0.27
LIME1-205ENST00000480139 I3L3M4 83 aa13.35□□□□□ -0.27
LIME1-205ENST00000480139 RTL8CO15255 209 aa13.35□□□□□ -0.27
LIME1-205ENST00000480139 URGCP-MRPS24S4R325 110 aa13.35□□□□□ -0.27
LIME1-205ENST00000480139 IBA57-AS1B1ANH7 110 aa13.34□□□□□ -0.27
LIME1-205ENST00000480139 D6R8Y8 96 aa13.34□□□□□ -0.27
LIME1-205ENST00000480139 PHOX2AO14813 284 aa13.34□□□□□ -0.27
LIME1-205ENST00000480139 IGHV3-30P01768 117 aa13.34□□□□□ -0.27
LIME1-205ENST00000480139 IGHV3-33P01772 117 aa13.34□□□□□ -0.27
LIME1-205ENST00000480139 IGHV3-30-3P0DP02 117 aa13.34□□□□□ -0.27
LIME1-205ENST00000480139 IGHV3-30-5P0DP03 117 aa13.34□□□□□ -0.27
LIME1-205ENST00000480139 SUMO2P61956 95 aaKnown RBP13.34□□□□□ -0.27
LIME1-205ENST00000480139 LAGE3Q14657 143 aa13.34□□□□□ -0.27
LIME1-205ENST00000480139 LINC00336Q6ZUF6 198 aa13.34□□□□□ -0.27
LIME1-205ENST00000480139 C20orf78Q9BR46 151 aa13.34□□□□□ -0.27
LIME1-205ENST00000480139 CHCHD5Q9BSY4 110 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms