RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 OR10AG1Q8NH19 301 aa4.7□□□□□ -1.66
COL17A1-205ENST00000480127 CHCHD7Q9BUK0 85 aa4.7□□□□□ -1.66
COL17A1-205ENST00000480127 DERL1Q9BUN8 251 aa4.7□□□□□ -1.66
COL17A1-205ENST00000480127 TRBV25-1A0A075B6N4 114 aa4.69□□□□□ -1.66
COL17A1-205ENST00000480127 TRBV6-8A0A0A6YYG3 113 aa4.69□□□□□ -1.66
COL17A1-205ENST00000480127 P01737 135 aa4.69□□□□□ -1.66
COL17A1-205ENST00000480127 C1QBP02746 253 aa4.69□□□□□ -1.66
COL17A1-205ENST00000480127 RPL35P42766 123 aaKnown RBP4.69□□□□□ -1.66
COL17A1-205ENST00000480127 CRIP1P50238 77 aa4.69□□□□□ -1.66
COL17A1-205ENST00000480127 RPS20P60866 119 aaKnown RBP4.69□□□□□ -1.66
COL17A1-205ENST00000480127 GAGE6Q13070 117 aa4.69□□□□□ -1.66
COL17A1-205ENST00000480127 ZNF345Q14585 488 aa4.69□□□□□ -1.66
COL17A1-205ENST00000480127 TMUB2Q71RG4 321 aa4.69□□□□□ -1.66
COL17A1-205ENST00000480127 SMIM15Q7Z3B0 74 aa4.69□□□□□ -1.66
COL17A1-205ENST00000480127 FER1L6-AS1Q8NA97 138 aa4.69□□□□□ -1.66
COL17A1-205ENST00000480127 OR2D3Q8NGH3 330 aa4.69□□□□□ -1.66
COL17A1-205ENST00000480127 DEFB104AQ8WTQ1 72 aa4.69□□□□□ -1.66
COL17A1-205ENST00000480127 BIN3Q9NQY0 253 aa4.69□□□□□ -1.66
COL17A1-205ENST00000480127 TRBV6-1A0A0K0K1D8 114 aa4.68□□□□□ -1.66
COL17A1-205ENST00000480127 TRGC1P0CF51 173 aa4.68□□□□□ -1.66
COL17A1-205ENST00000480127 SULT1A2P50226 295 aa4.68□□□□□ -1.66
COL17A1-205ENST00000480127 UBE2D3P61077 147 aa4.68□□□□□ -1.66
COL17A1-205ENST00000480127 UBE2D2P62837 147 aa4.68□□□□□ -1.66
COL17A1-205ENST00000480127 WFDC2Q14508 124 aa4.68□□□□□ -1.66
COL17A1-205ENST00000480127 CENPWQ5EE01 88 aa4.68□□□□□ -1.66
COL17A1-205ENST00000480127 DNLZQ5SXM8 178 aa4.68□□□□□ -1.66
COL17A1-205ENST00000480127 WDR73Q6P4I2 378 aa4.68□□□□□ -1.66
COL17A1-205ENST00000480127 NEXN-AS1Q8NBZ9 246 aa4.68□□□□□ -1.66
COL17A1-205ENST00000480127 CYTL1Q9NRR1 136 aa4.68□□□□□ -1.66
COL17A1-205ENST00000480127 AP5S1Q9NUS5 200 aa4.68□□□□□ -1.66
COL17A1-205ENST00000480127 MED9Q9NWA0 146 aa4.68□□□□□ -1.66
COL17A1-205ENST00000480127 Q9UF83 564 aa4.68□□□□□ -1.66
COL17A1-205ENST00000480127 IGHV1-24A0A0C4DH33 117 aa4.67□□□□□ -1.66
COL17A1-205ENST00000480127 PDE6DO43924 150 aa4.67□□□□□ -1.66
COL17A1-205ENST00000480127 IGLV2-8P01709 118 aa4.67□□□□□ -1.66
COL17A1-205ENST00000480127 LINC00694P0DN24 101 aa4.67□□□□□ -1.66
COL17A1-205ENST00000480127 RAB5CP51148 216 aa4.67□□□□□ -1.66
COL17A1-205ENST00000480127 CEBPGP53567 150 aa4.67□□□□□ -1.66
COL17A1-205ENST00000480127 MIAQ16674 131 aa4.67□□□□□ -1.66
COL17A1-205ENST00000480127 MPV17L2Q567V2 206 aa4.67□□□□□ -1.66
COL17A1-205ENST00000480127 AMMECR1LQ6DCA0 310 aa4.67□□□□□ -1.66
COL17A1-205ENST00000480127 UFSP1Q6NVU6 142 aa4.67□□□□□ -1.66
COL17A1-205ENST00000480127 Q6ZSA8 131 aa4.67□□□□□ -1.66
COL17A1-205ENST00000480127 COX8CQ7Z4L0 72 aa4.67□□□□□ -1.66
COL17A1-205ENST00000480127 MBD3L1Q8WWY6 194 aa4.67□□□□□ -1.66
COL17A1-205ENST00000480127 PLA2G2DQ9UNK4 145 aa4.67□□□□□ -1.66
COL17A1-205ENST00000480127 IGLV10-54A0A075B6I4 117 aa4.66□□□□□ -1.66
COL17A1-205ENST00000480127 IGKV3OR2-268A0A0C4DH90 116 aa4.66□□□□□ -1.66
COL17A1-205ENST00000480127 hDV102S1A0JD36 115 aa4.66□□□□□ -1.66
COL17A1-205ENST00000480127 HMSDA8MTL9 139 aa4.66□□□□□ -1.66
COL17A1-205ENST00000480127 USP17L23D6RBM5 183 aa4.66□□□□□ -1.66
COL17A1-205ENST00000480127 CXCL1P09341 107 aa4.66□□□□□ -1.66
COL17A1-205ENST00000480127 OR5AL1P0C617 328 aa4.66□□□□□ -1.66
COL17A1-205ENST00000480127 GZMBP10144 247 aa4.66□□□□□ -1.66
COL17A1-205ENST00000480127 NKX2-5P52952 324 aaPredicted RBP4.66□□□□□ -1.66
COL17A1-205ENST00000480127 KRTAP10-4P60372 401 aaPredicted RBP4.66□□□□□ -1.66
COL17A1-205ENST00000480127 CACNG7P62955 275 aa4.66□□□□□ -1.66
COL17A1-205ENST00000480127 COTL1Q14019 142 aa4.66□□□□□ -1.66
COL17A1-205ENST00000480127 TWIST1Q15672 202 aa4.66□□□□□ -1.66
COL17A1-205ENST00000480127 SCXQ7RTU7 201 aa4.66□□□□□ -1.66
COL17A1-205ENST00000480127 LINC00269Q8N2A0 174 aa4.66□□□□□ -1.66
COL17A1-205ENST00000480127 BORCS7Q96B45 105 aa4.66□□□□□ -1.66
COL17A1-205ENST00000480127 DNAJC30Q96LL9 226 aa4.66□□□□□ -1.66
COL17A1-205ENST00000480127 TMEM243Q9BU79 118 aa4.66□□□□□ -1.66
COL17A1-205ENST00000480127 CHAC1Q9BUX1 264 aa4.66□□□□□ -1.66
COL17A1-205ENST00000480127 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.65□□□□□ -1.67
COL17A1-205ENST00000480127 F2Z2F3 143 aa4.65□□□□□ -1.67
COL17A1-205ENST00000480127 OXTP01178 125 aa4.65□□□□□ -1.67
COL17A1-205ENST00000480127 AMTP48728 403 aa4.65□□□□□ -1.67
COL17A1-205ENST00000480127 RBX1P62877 108 aa4.65□□□□□ -1.67
COL17A1-205ENST00000480127 MEF2BQ02080 365 aaPredicted RBP4.65□□□□□ -1.67
COL17A1-205ENST00000480127 RASL11AQ6T310 242 aa4.65□□□□□ -1.67
COL17A1-205ENST00000480127 ATRAIDQ6UW56 229 aa4.65□□□□□ -1.67
COL17A1-205ENST00000480127 OR10G8Q8NGN5 311 aa4.65□□□□□ -1.67
COL17A1-205ENST00000480127 DPH3P1Q9H4G8 78 aa4.65□□□□□ -1.67
COL17A1-205ENST00000480127 DNAH8Q96JB1 4490 aa4.65□□□□□ -1.67
COL17A1-205ENST00000480127 LRP1Q07954 4544 aaKnown RBP4.65□□□□□ -1.67
COL17A1-205ENST00000480127 RAB19A4D1S5 217 aa4.64□□□□□ -1.67
COL17A1-205ENST00000480127 SNAI2O43623 268 aa4.64□□□□□ -1.67
COL17A1-205ENST00000480127 TAGLN2P37802 199 aaKnown RBP4.64□□□□□ -1.67
COL17A1-205ENST00000480127 RPL37AP61513 92 aaKnown RBP4.64□□□□□ -1.67
COL17A1-205ENST00000480127 REG3AQ06141 175 aa4.64□□□□□ -1.67
COL17A1-205ENST00000480127 SUMO4Q6EEV6 95 aa4.64□□□□□ -1.67
COL17A1-205ENST00000480127 RNASEKQ6P5S7 137 aaKnown RBP4.64□□□□□ -1.67
COL17A1-205ENST00000480127 G3V3Q6 166 aa4.63□□□□□ -1.67
COL17A1-205ENST00000480127 BCL2P10415 239 aa4.63□□□□□ -1.67
COL17A1-205ENST00000480127 CCL20P78556 96 aa4.63□□□□□ -1.67
COL17A1-205ENST00000480127 CFAP161Q6P656 301 aa4.63□□□□□ -1.67
COL17A1-205ENST00000480127 LYZL1Q6UWQ5 148 aa4.63□□□□□ -1.67
COL17A1-205ENST00000480127 ENHOQ6UWT2 76 aa4.63□□□□□ -1.67
COL17A1-205ENST00000480127 CIRBP-AS1Q8TBR5 109 aa4.63□□□□□ -1.67
COL17A1-205ENST00000480127 SMIM12Q96EX1 92 aa4.63□□□□□ -1.67
COL17A1-205ENST00000480127 TMEM101Q96IK0 257 aa4.63□□□□□ -1.67
COL17A1-205ENST00000480127 BTF3L4Q96K17 158 aa4.63□□□□□ -1.67
COL17A1-205ENST00000480127 MLST8Q9BVC4 326 aa4.63□□□□□ -1.67
COL17A1-205ENST00000480127 VAX2Q9UIW0 290 aa4.63□□□□□ -1.67
COL17A1-205ENST00000480127 IGHV3-64A0A075B6Q5 118 aa4.62□□□□□ -1.67
COL17A1-205ENST00000480127 TRAV8-4A0A0B4J246 113 aa4.62□□□□□ -1.67
COL17A1-205ENST00000480127 APCSP02743 223 aa4.62□□□□□ -1.67
COL17A1-205ENST00000480127 NTF3P20783 257 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms