RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 ODF1Q14990 250 aa10.94□□□□□ -0.66
COL20A1-206ENST00000479501 BPTFQ12830 3046 aa10.94□□□□□ -0.66
COL20A1-206ENST00000479501 CCL24O00175 119 aa10.94□□□□□ -0.66
COL20A1-206ENST00000479501 IGF1P05019 195 aa10.94□□□□□ -0.66
COL20A1-206ENST00000479501 RBX1P62877 108 aa10.94□□□□□ -0.66
COL20A1-206ENST00000479501 TMEM126AQ9H061 195 aa10.94□□□□□ -0.66
COL20A1-206ENST00000479501 TRAV13-2A0A0B4J235 113 aa10.94□□□□□ -0.66
COL20A1-206ENST00000479501 TINCRA0A1B0GVN0 87 aa10.94□□□□□ -0.66
COL20A1-206ENST00000479501 TMEM89A2RUT3 159 aa10.94□□□□□ -0.66
COL20A1-206ENST00000479501 PRSS47A8MTI9 375 aa10.93□□□□□ -0.66
COL20A1-206ENST00000479501 RHOHQ15669 191 aa10.93□□□□□ -0.66
COL20A1-206ENST00000479501 LINC01620Q4KN68 170 aa10.93□□□□□ -0.66
COL20A1-206ENST00000479501 TP73-AS1Q9UF72 201 aa10.93□□□□□ -0.66
COL20A1-206ENST00000479501 BAALC-AS2P0C853 105 aa10.93□□□□□ -0.66
COL20A1-206ENST00000479501 TP53TG3Q9ULZ0 132 aa10.93□□□□□ -0.66
COL20A1-206ENST00000479501 NXPH4O95158 308 aa10.92□□□□□ -0.66
COL20A1-206ENST00000479501 APRG1Q8IVJ8 170 aa10.92□□□□□ -0.66
COL20A1-206ENST00000479501 SUMO4Q6EEV6 95 aa10.92□□□□□ -0.66
COL20A1-206ENST00000479501 MUSTN1Q8IVN3 82 aa10.92□□□□□ -0.66
COL20A1-206ENST00000479501 Q8N6K4 173 aa10.92□□□□□ -0.66
COL20A1-206ENST00000479501 PTH2Q96A98 100 aa10.92□□□□□ -0.66
COL20A1-206ENST00000479501 A0A0J9YXV3 536 aa10.92□□□□□ -0.66
COL20A1-206ENST00000479501 HERVK_113P63121 156 aa10.92□□□□□ -0.66
COL20A1-206ENST00000479501 LOXL1Q08397 574 aaPredicted RBP10.92□□□□□ -0.66
COL20A1-206ENST00000479501 ZFAND3Q9H8U3 227 aa10.92□□□□□ -0.66
COL20A1-206ENST00000479501 ACYP1P07311 99 aa10.92□□□□□ -0.66
COL20A1-206ENST00000479501 ABCA12Q86UK0 2595 aa10.91□□□□□ -0.66
COL20A1-206ENST00000479501 TRAV12-1A0A0B4J245 112 aa10.91□□□□□ -0.66
COL20A1-206ENST00000479501 Q8N1Y9 231 aa10.91□□□□□ -0.66
COL20A1-206ENST00000479501 LAMA3Q16787 3333 aa10.91□□□□□ -0.66
COL20A1-206ENST00000479501 CRIP1P50238 77 aa10.91□□□□□ -0.66
COL20A1-206ENST00000479501 Q71RC1 249 aaPredicted RBP10.91□□□□□ -0.66
COL20A1-206ENST00000479501 IGLC6P0CF74 106 aa10.9□□□□□ -0.66
COL20A1-206ENST00000479501 TMEM243Q9BU79 118 aa10.9□□□□□ -0.66
COL20A1-206ENST00000479501 Q9H8V8 135 aa10.9□□□□□ -0.66
COL20A1-206ENST00000479501 U3KQE9 123 aa10.9□□□□□ -0.66
COL20A1-206ENST00000479501 E9PLD3 99 aa10.9□□□□□ -0.66
COL20A1-206ENST00000479501 MED14OSP0DP75 135 aa10.9□□□□□ -0.67
COL20A1-206ENST00000479501 ZFP2Q6ZN57 461 aa10.9□□□□□ -0.67
COL20A1-206ENST00000479501 LRRK2Q5S007 2527 aa10.89□□□□□ -0.67
COL20A1-206ENST00000479501 IGLV2-11P01706 119 aa10.89□□□□□ -0.67
COL20A1-206ENST00000479501 ADAMTS20P59510 1910 aa10.89□□□□□ -0.67
COL20A1-206ENST00000479501 SPANXCQ9NY87 97 aa10.89□□□□□ -0.67
COL20A1-206ENST00000479501 SMAD5-AS1Q9Y6J3 95 aa10.89□□□□□ -0.67
COL20A1-206ENST00000479501 BRCA2P51587 3418 aa10.88□□□□□ -0.67
COL20A1-206ENST00000479501 FAM236AA0A1B0GUQ0 79 aa10.88□□□□□ -0.67
COL20A1-206ENST00000479501 FAM236BA0A1B0GV22 79 aa10.88□□□□□ -0.67
COL20A1-206ENST00000479501 A0A0J9YX75 114 aa10.88□□□□□ -0.67
COL20A1-206ENST00000479501 CRLF1O75462 422 aa10.88□□□□□ -0.67
COL20A1-206ENST00000479501 ZFYVE26Q68DK2 2539 aa10.87□□□□□ -0.67
COL20A1-206ENST00000479501 RPL39P62891 51 aaKnown RBP10.87□□□□□ -0.67
COL20A1-206ENST00000479501 ICOSQ9Y6W8 199 aa10.87□□□□□ -0.67
COL20A1-206ENST00000479501 TMEM61Q8N0U2 210 aa10.87□□□□□ -0.67
COL20A1-206ENST00000479501 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.86□□□□□ -0.67
COL20A1-206ENST00000479501 IGKV2-29A2NJV5 120 aaPredicted RBP10.86□□□□□ -0.67
COL20A1-206ENST00000479501 ATP6V0E2Q8NHE4 81 aa10.86□□□□□ -0.67
COL20A1-206ENST00000479501 BAALCQ8WXS3 180 aa10.86□□□□□ -0.67
COL20A1-206ENST00000479501 PRRC2AP48634 2157 aaKnown RBP10.86□□□□□ -0.67
COL20A1-206ENST00000479501 C11orf86A6NJI1 115 aa10.86□□□□□ -0.67
COL20A1-206ENST00000479501 RBMY1FQ15415 496 aaKnown RBP10.86□□□□□ -0.67
COL20A1-206ENST00000479501 C3orf56Q8N813 242 aa10.86□□□□□ -0.67
COL20A1-206ENST00000479501 RNF152Q8N8N0 203 aa10.86□□□□□ -0.67
COL20A1-206ENST00000479501 NOP10Q9NPE3 64 aaKnown RBP10.86□□□□□ -0.67
COL20A1-206ENST00000479501 TRANK1O15050 2925 aa10.85□□□□□ -0.67
COL20A1-206ENST00000479501 MDFICQ9P1T7 246 aa10.85□□□□□ -0.67
COL20A1-206ENST00000479501 RPL32P62910 135 aaKnown RBP10.85□□□□□ -0.67
COL20A1-206ENST00000479501 RBM3P98179 157 aaKnown RBP10.84□□□□□ -0.67
COL20A1-206ENST00000479501 TOMM6Q96B49 74 aa10.84□□□□□ -0.67
COL20A1-206ENST00000479501 DSCR8Q96T75 97 aa10.84□□□□□ -0.67
COL20A1-206ENST00000479501 LAMA2P24043 3122 aaKnown RBP10.84□□□□□ -0.67
COL20A1-206ENST00000479501 Q6ZUT4 128 aa10.84□□□□□ -0.67
COL20A1-206ENST00000479501 RNF183Q96D59 192 aa10.84□□□□□ -0.67
COL20A1-206ENST00000479501 TRBV10-2A0A0K0K1G8 114 aa10.83□□□□□ -0.68
COL20A1-206ENST00000479501 DAD1P61803 113 aa10.83□□□□□ -0.68
COL20A1-206ENST00000479501 C20orf173Q96LM9 149 aa10.83□□□□□ -0.68
COL20A1-206ENST00000479501 A0A1B0GX51 115 aa10.82□□□□□ -0.68
COL20A1-206ENST00000479501 JMJD1CQ15652 2540 aa10.82□□□□□ -0.68
COL20A1-206ENST00000479501 A0A1W2PPR1 153 aa10.82□□□□□ -0.68
COL20A1-206ENST00000479501 F5H768 121 aa10.82□□□□□ -0.68
COL20A1-206ENST00000479501 F8WEM9 126 aa10.82□□□□□ -0.68
COL20A1-206ENST00000479501 NDUFA11Q86Y39 141 aa10.82□□□□□ -0.68
COL20A1-206ENST00000479501 TIMM17AQ99595 171 aa10.82□□□□□ -0.68
COL20A1-206ENST00000479501 A0A0B4J2C4 111 aa10.82□□□□□ -0.68
COL20A1-206ENST00000479501 H3BT86 120 aa10.82□□□□□ -0.68
COL20A1-206ENST00000479501 ATOX1O00244 68 aa10.82□□□□□ -0.68
COL20A1-206ENST00000479501 SPANXB1Q9NS25 103 aaPredicted RBP10.82□□□□□ -0.68
COL20A1-206ENST00000479501 MT-ATP8P03928 68 aa10.81□□□□□ -0.68
COL20A1-206ENST00000479501 IGKV3D-7A0A0C4DH55 119 aa10.81□□□□□ -0.68
COL20A1-206ENST00000479501 DAND5Q8N907 189 aa10.81□□□□□ -0.68
COL20A1-206ENST00000479501 TM2D2Q9BX73 214 aa10.81□□□□□ -0.68
COL20A1-206ENST00000479501 K7EQG2 157 aa10.81□□□□□ -0.68
COL20A1-206ENST00000479501 ZFAND2AQ8N6M9 145 aa10.81□□□□□ -0.68
COL20A1-206ENST00000479501 SLC25A29Q8N8R3 303 aa10.81□□□□□ -0.68
COL20A1-206ENST00000479501 C4orf3Q8WVX3 66 aa10.81□□□□□ -0.68
COL20A1-206ENST00000479501 ORMDL1Q9P0S3 153 aa10.81□□□□□ -0.68
COL20A1-206ENST00000479501 IGHV4-31P0DP07 118 aa10.81□□□□□ -0.68
COL20A1-206ENST00000479501 Q6YL49 198 aa10.81□□□□□ -0.68
COL20A1-206ENST00000479501 HERV-K104P63124 156 aa10.8□□□□□ -0.68
COL20A1-206ENST00000479501 TCL1BO95988 128 aa10.8□□□□□ -0.68
COL20A1-206ENST00000479501 PIFOQ8TCI5 191 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms