RNA–Protein interactions for RNA: ENST00000479381.5

CMTM1-208, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 995 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-208ENST00000479381 TRAV1-1A0A0B4J248 108 aa6.14□□□□□ -1.43
CMTM1-208ENST00000479381 TRBV10-1A0A0K0K1A3 114 aa6.14□□□□□ -1.43
CMTM1-208ENST00000479381 RBFOX3A6NFN3 312 aa6.14□□□□□ -1.43
CMTM1-208ENST00000479381 KRTAP10-2P60368 255 aa6.14□□□□□ -1.43
CMTM1-208ENST00000479381 RAB4BP61018 213 aa6.14□□□□□ -1.43
CMTM1-208ENST00000479381 MAPKAPK5-AS1Q8N8E1 139 aa6.14□□□□□ -1.43
CMTM1-208ENST00000479381 EIF5A2Q9GZV4 153 aaKnown RBP6.14□□□□□ -1.43
CMTM1-208ENST00000479381 SCRT2Q9NQ03 307 aa6.14□□□□□ -1.43
CMTM1-208ENST00000479381 TRBV7-3A0A075B6L6 115 aa6.13□□□□□ -1.43
CMTM1-208ENST00000479381 IGKV2D-24A0A075B6R9 120 aa6.13□□□□□ -1.43
CMTM1-208ENST00000479381 IGLV5-52A0A0A0MRZ9 124 aa6.13□□□□□ -1.43
CMTM1-208ENST00000479381 TRAV8-3A0A0A6YYJ7 113 aa6.13□□□□□ -1.43
CMTM1-208ENST00000479381 IBA57-AS1B1ANH7 110 aa6.13□□□□□ -1.43
CMTM1-208ENST00000479381 H7C1H1 209 aa6.13□□□□□ -1.43
CMTM1-208ENST00000479381 OR5AL1P0C617 328 aa6.13□□□□□ -1.43
CMTM1-208ENST00000479381 TRGC1P0CF51 173 aa6.13□□□□□ -1.43
CMTM1-208ENST00000479381 CACNG7P62955 275 aa6.13□□□□□ -1.43
CMTM1-208ENST00000479381 ELOBQ15370 118 aa6.13□□□□□ -1.43
CMTM1-208ENST00000479381 Q6ZRN7 208 aaPredicted RBP6.13□□□□□ -1.43
CMTM1-208ENST00000479381 SMIM15Q7Z3B0 74 aa6.13□□□□□ -1.43
CMTM1-208ENST00000479381 UBE2WQ96B02 151 aa6.13□□□□□ -1.43
CMTM1-208ENST00000479381 CHCHD5Q9BSY4 110 aa6.13□□□□□ -1.43
CMTM1-208ENST00000479381 MLST8Q9BVC4 326 aa6.13□□□□□ -1.43
CMTM1-208ENST00000479381 KLK12Q9UKR0 248 aa6.13□□□□□ -1.43
CMTM1-208ENST00000479381 DNAH11Q96DT5 4516 aa6.13□□□□□ -1.43
CMTM1-208ENST00000479381 SNAI2O43623 268 aa6.12□□□□□ -1.43
CMTM1-208ENST00000479381 UFSP1Q6NVU6 142 aa6.12□□□□□ -1.43
CMTM1-208ENST00000479381 DAZ4Q86SG3 579 aaKnown RBP6.12□□□□□ -1.43
CMTM1-208ENST00000479381 BORCS7Q96B45 105 aa6.12□□□□□ -1.43
CMTM1-208ENST00000479381 SMIM12Q96EX1 92 aa6.12□□□□□ -1.43
CMTM1-208ENST00000479381 DAZ3Q9NR90 486 aaKnown RBP6.12□□□□□ -1.43
CMTM1-208ENST00000479381 DYNC1H1Q14204 4646 aaKnown RBP6.11□□□□□ -1.43
CMTM1-208ENST00000479381 LINC00862A6NCI5 91 aa6.11□□□□□ -1.43
CMTM1-208ENST00000479381 LECT2O14960 151 aa6.11□□□□□ -1.43
CMTM1-208ENST00000479381 GATCO43716 136 aaKnown RBP6.11□□□□□ -1.43
CMTM1-208ENST00000479381 ANGP03950 147 aaKnown RBP6.11□□□□□ -1.43
CMTM1-208ENST00000479381 PKIAP61925 76 aa6.11□□□□□ -1.43
CMTM1-208ENST00000479381 LAGE3Q14657 143 aa6.11□□□□□ -1.43
CMTM1-208ENST00000479381 TWIST1Q15672 202 aa6.11□□□□□ -1.43
CMTM1-208ENST00000479381 NEXN-AS1Q8NBZ9 246 aa6.11□□□□□ -1.43
CMTM1-208ENST00000479381 RPP21Q9H633 154 aaKnown RBP6.11□□□□□ -1.43
CMTM1-208ENST00000479381 Q9UF83 564 aa6.11□□□□□ -1.43
CMTM1-208ENST00000479381 PKD1P98161 4303 aa6.1□□□□□ -1.43
CMTM1-208ENST00000479381 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.1□□□□□ -1.43
CMTM1-208ENST00000479381 F2Z2F3 143 aa6.1□□□□□ -1.43
CMTM1-208ENST00000479381 UBE2L6O14933 153 aa6.1□□□□□ -1.43
CMTM1-208ENST00000479381 CDK2AP2O75956 126 aa6.1□□□□□ -1.43
CMTM1-208ENST00000479381 LINC00694P0DN24 101 aa6.1□□□□□ -1.43
CMTM1-208ENST00000479381 GCSHP23434 173 aa6.1□□□□□ -1.43
CMTM1-208ENST00000479381 UBE2D3P61077 147 aa6.1□□□□□ -1.43
CMTM1-208ENST00000479381 UBE2D2P62837 147 aa6.1□□□□□ -1.43
CMTM1-208ENST00000479381 TMEM97Q5BJF2 176 aa6.1□□□□□ -1.43
CMTM1-208ENST00000479381 LYZL1Q6UWQ5 148 aa6.1□□□□□ -1.43
CMTM1-208ENST00000479381 NIT1Q86X76 327 aa6.1□□□□□ -1.43
CMTM1-208ENST00000479381 C15orf54Q8N8G6 183 aa6.1□□□□□ -1.43
CMTM1-208ENST00000479381 NUDT10Q8NFP7 164 aa6.1□□□□□ -1.43
CMTM1-208ENST00000479381 LYPD6BQ8NI32 183 aa6.1□□□□□ -1.43
CMTM1-208ENST00000479381 NUDT11Q96G61 164 aa6.1□□□□□ -1.43
CMTM1-208ENST00000479381 RNASE7Q9H1E1 156 aaKnown RBP6.1□□□□□ -1.43
CMTM1-208ENST00000479381 DPH3P1Q9H4G8 78 aa6.1□□□□□ -1.43
CMTM1-208ENST00000479381 COX11Q9Y6N1 276 aa6.1□□□□□ -1.43
CMTM1-208ENST00000479381 PKHD1P08F94 4074 aa6.09□□□□□ -1.43
CMTM1-208ENST00000479381 TRBV25-1A0A075B6N4 114 aa6.09□□□□□ -1.43
CMTM1-208ENST00000479381 KRTAP4-8A0A0G2JLE6 195 aa6.09□□□□□ -1.43
CMTM1-208ENST00000479381 IGLV2-8P01709 118 aa6.09□□□□□ -1.43
CMTM1-208ENST00000479381 GAGE6Q13070 117 aa6.09□□□□□ -1.43
CMTM1-208ENST00000479381 CLPSL2Q6UWE3 100 aa6.09□□□□□ -1.43
CMTM1-208ENST00000479381 COMMD7Q86VX2 200 aa6.09□□□□□ -1.43
CMTM1-208ENST00000479381 C1orf43Q9BWL3 253 aa6.09□□□□□ -1.43
CMTM1-208ENST00000479381 KIAA1109Q2LD37 5005 aa6.08□□□□□ -1.44
CMTM1-208ENST00000479381 HERC2O95714 4834 aa6.08□□□□□ -1.44
CMTM1-208ENST00000479381 TRBV6-8A0A0A6YYG3 113 aa6.08□□□□□ -1.44
CMTM1-208ENST00000479381 IGHV1-24A0A0C4DH33 117 aa6.08□□□□□ -1.44
CMTM1-208ENST00000479381 C19orf71A6NCJ1 209 aa6.08□□□□□ -1.44
CMTM1-208ENST00000479381 ZNF727A8MUV8 499 aa6.08□□□□□ -1.44
CMTM1-208ENST00000479381 HLA-DQA1P01909 254 aa6.08□□□□□ -1.44
CMTM1-208ENST00000479381 NTF3P20783 257 aa6.08□□□□□ -1.44
CMTM1-208ENST00000479381 Q0VG73 95 aa6.08□□□□□ -1.44
CMTM1-208ENST00000479381 PEA15Q15121 130 aa6.08□□□□□ -1.44
CMTM1-208ENST00000479381 SUMO4Q6EEV6 95 aa6.08□□□□□ -1.44
CMTM1-208ENST00000479381 UQCC3Q6UW78 93 aa6.08□□□□□ -1.44
CMTM1-208ENST00000479381 Q8N814 137 aa6.08□□□□□ -1.44
CMTM1-208ENST00000479381 OR10G8Q8NGN5 311 aa6.08□□□□□ -1.44
CMTM1-208ENST00000479381 OCC1Q8TAD7 63 aa6.08□□□□□ -1.44
CMTM1-208ENST00000479381 NTN5Q8WTR8 489 aaPredicted RBP6.08□□□□□ -1.44
CMTM1-208ENST00000479381 BAALCQ8WXS3 180 aa6.08□□□□□ -1.44
CMTM1-208ENST00000479381 DNAJC30Q96LL9 226 aa6.08□□□□□ -1.44
CMTM1-208ENST00000479381 FAM210AQ96ND0 272 aa6.08□□□□□ -1.44
CMTM1-208ENST00000479381 SMIM7Q9BQ49 75 aa6.08□□□□□ -1.44
CMTM1-208ENST00000479381 CHCHD7Q9BUK0 85 aa6.08□□□□□ -1.44
CMTM1-208ENST00000479381 TRBV20OR9-2A0A075B6H5 130 aa6.07□□□□□ -1.44
CMTM1-208ENST00000479381 TMEM250H0YL14 139 aa6.07□□□□□ -1.44
CMTM1-208ENST00000479381 IGLC6P0CF74 106 aa6.07□□□□□ -1.44
CMTM1-208ENST00000479381 MPV17L2Q567V2 206 aa6.07□□□□□ -1.44
CMTM1-208ENST00000479381 RASL11AQ6T310 242 aa6.07□□□□□ -1.44
CMTM1-208ENST00000479381 SLC7A5P1Q8MH63 180 aa6.07□□□□□ -1.44
CMTM1-208ENST00000479381 DEFB104AQ8WTQ1 72 aa6.07□□□□□ -1.44
CMTM1-208ENST00000479381 FRZBQ92765 325 aa6.07□□□□□ -1.44
CMTM1-208ENST00000479381 PGLYRP4Q96LB8 373 aa6.07□□□□□ -1.44
CMTM1-208ENST00000479381 SMDT1Q9H4I9 107 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms