RNA–Protein interactions for RNA: ENST00000479197.1

RFK-204, Transcript of riboflavin kinase, human

TSL 1 (best)

Gene RFK, Length 1,501 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFK-204	ENST00000479197	UBE2D2	P62837	147 aa		12.34	□□□□□ -0.43
RFK-204	ENST00000479197	TMEM191A	Q9H0A3	160 aa		12.34	□□□□□ -0.43
RFK-204	ENST00000479197	CARHSP1	Q9Y2V2	147 aa	Known RBP	12.33	□□□□□ -0.44
RFK-204	ENST00000479197		M0R2N4	97 aa		12.32	□□□□□ -0.44
RFK-204	ENST00000479197	SIVA1	O15304	175 aa		12.32	□□□□□ -0.44
RFK-204	ENST00000479197	LELP1	Q5T871	98 aa		12.32	□□□□□ -0.44
RFK-204	ENST00000479197	RASL11A	Q6T310	242 aa		12.32	□□□□□ -0.44
RFK-204	ENST00000479197	TRAV26-2	A0A0B4J265	109 aa		12.32	□□□□□ -0.44
RFK-204	ENST00000479197		A0A1B0GW15	77 aa		12.32	□□□□□ -0.44
RFK-204	ENST00000479197	DNAJC30	Q96LL9	226 aa		12.32	□□□□□ -0.44
RFK-204	ENST00000479197	TNFRSF18	Q9Y5U5	241 aa		12.32	□□□□□ -0.44
RFK-204	ENST00000479197	NBDY	A0A0U1RRE5	68 aa		12.31	□□□□□ -0.44
RFK-204	ENST00000479197	MRPL54	Q6P161	138 aa	Known RBP	12.31	□□□□□ -0.44
RFK-204	ENST00000479197		Q6ZR54	194 aa		12.31	□□□□□ -0.44
RFK-204	ENST00000479197	WFDC10B	Q8IUB3	73 aa		12.31	□□□□□ -0.44
RFK-204	ENST00000479197	GATD1	Q8NB37	220 aa		12.31	□□□□□ -0.44
RFK-204	ENST00000479197		A0A087WWC5	75 aa		12.3	□□□□□ -0.44
RFK-204	ENST00000479197	TRAV8-6	A0A0B4J262	113 aa		12.3	□□□□□ -0.44
RFK-204	ENST00000479197	CAMP	P49913	170 aa		12.3	□□□□□ -0.44
RFK-204	ENST00000479197	HBB	P68871	147 aa		12.3	□□□□□ -0.44
RFK-204	ENST00000479197	OR10J3	Q5JRS4	329 aa		12.3	□□□□□ -0.44
RFK-204	ENST00000479197	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	12.3	□□□□□ -0.44
RFK-204	ENST00000479197	FRZB	Q92765	325 aa		12.3	□□□□□ -0.44
RFK-204	ENST00000479197	CTDSP1	Q9GZU7	261 aa		12.3	□□□□□ -0.44
RFK-204	ENST00000479197	NIT2	Q9NQR4	276 aa		12.3	□□□□□ -0.44
RFK-204	ENST00000479197	S100A8	P05109	93 aa		12.29	□□□□□ -0.44
RFK-204	ENST00000479197	ATP5L2	Q7Z4Y8	100 aa		12.29	□□□□□ -0.44
RFK-204	ENST00000479197	DAZ4	Q86SG3	579 aa	Known RBP	12.29	□□□□□ -0.44
RFK-204	ENST00000479197	AMN1	Q8IY45	258 aa		12.29	□□□□□ -0.44
RFK-204	ENST00000479197	RNF185	Q96GF1	192 aa		12.29	□□□□□ -0.44
RFK-204	ENST00000479197	DAZ3	Q9NR90	486 aa	Known RBP	12.29	□□□□□ -0.44
RFK-204	ENST00000479197	DNAH2	Q9P225	4427 aa		12.29	□□□□□ -0.44
RFK-204	ENST00000479197	IGHV3-38	A0A0C4DH36	116 aa		12.28	□□□□□ -0.44
RFK-204	ENST00000479197		A0A1B0GXF2	115 aa		12.28	□□□□□ -0.44
RFK-204	ENST00000479197	RAB4A	P20338	218 aa		12.28	□□□□□ -0.44
RFK-204	ENST00000479197	TTC32	Q5I0X7	151 aa		12.28	□□□□□ -0.44
RFK-204	ENST00000479197	IMMP2L	Q96T52	175 aa		12.28	□□□□□ -0.44
RFK-204	ENST00000479197	CLRN3	Q8NCR9	226 aa		12.27	□□□□□ -0.44
RFK-204	ENST00000479197	DNAH10OS	P0CZ25	163 aa		12.27	□□□□□ -0.45
RFK-204	ENST00000479197	RHEB	Q15382	184 aa		12.27	□□□□□ -0.45
RFK-204	ENST00000479197	NDUFA5	Q16718	116 aa		12.27	□□□□□ -0.45
RFK-204	ENST00000479197	RPL39L	Q96EH5	51 aa	Known RBP	12.27	□□□□□ -0.45
RFK-204	ENST00000479197	MRAP2	Q96G30	205 aa		12.27	□□□□□ -0.45
RFK-204	ENST00000479197	C7orf77	A4D0Y5	90 aa		12.26	□□□□□ -0.45
RFK-204	ENST00000479197	APOC3	P02656	99 aa		12.26	□□□□□ -0.45
RFK-204	ENST00000479197	FAM104B	Q5XKR9	115 aa		12.26	□□□□□ -0.45
RFK-204	ENST00000479197	KRTAP1-5	Q9BYS1	174 aa		12.26	□□□□□ -0.45
RFK-204	ENST00000479197	FRAS1	Q86XX4	4008 aa		12.25	□□□□□ -0.45
RFK-204	ENST00000479197	DNAH10	Q8IVF4	4471 aa		12.25	□□□□□ -0.45
RFK-204	ENST00000479197	KCNIP4	Q6PIL6	250 aa		12.25	□□□□□ -0.45
RFK-204	ENST00000479197	BTF3L4	Q96K17	158 aa		12.25	□□□□□ -0.45
RFK-204	ENST00000479197	TMEM242	Q9NWH2	141 aa		12.25	□□□□□ -0.45
RFK-204	ENST00000479197	TRBV6-8	A0A0A6YYG3	113 aa		12.24	□□□□□ -0.45
RFK-204	ENST00000479197	TMEM97	Q5BJF2	176 aa		12.24	□□□□□ -0.45
RFK-204	ENST00000479197	LINC01556	Q5JQF7	62 aa		12.24	□□□□□ -0.45
RFK-204	ENST00000479197	TRAV9-2	A0A087WT02	112 aa		12.23	□□□□□ -0.45
RFK-204	ENST00000479197		K7EP13	123 aa		12.23	□□□□□ -0.45
RFK-204	ENST00000479197	GAS8-AS1	O95177	125 aa		12.23	□□□□□ -0.45
RFK-204	ENST00000479197	SLC7A5P1	Q8MH63	180 aa		12.23	□□□□□ -0.45
RFK-204	ENST00000479197	SVBP	Q8N300	66 aa		12.23	□□□□□ -0.45
RFK-204	ENST00000479197	RPS10P5	Q9NQ39	176 aa		12.23	□□□□□ -0.45
RFK-204	ENST00000479197	TRBV6-5	A0A0K0K1A5	114 aa		12.22	□□□□□ -0.45
RFK-204	ENST00000479197	MRPL51	Q4U2R6	128 aa	Known RBP	12.22	□□□□□ -0.45
RFK-204	ENST00000479197	TRAV9-1	A0A075B6T8	112 aa		12.21	□□□□□ -0.45
RFK-204	ENST00000479197	SNAPIN	O95295	136 aa		12.21	□□□□□ -0.45
RFK-204	ENST00000479197	NCR2	O95944	276 aa		12.21	□□□□□ -0.45
RFK-204	ENST00000479197	S100P	P25815	95 aa		12.21	□□□□□ -0.45
RFK-204	ENST00000479197	RPS10	P46783	165 aa	Known RBP	12.21	□□□□□ -0.45
RFK-204	ENST00000479197	C1orf134	Q5TEV5	83 aa		12.21	□□□□□ -0.45
RFK-204	ENST00000479197	NTM-AS1	Q6ZSK4	140 aa		12.21	□□□□□ -0.45
RFK-204	ENST00000479197	SMKR1	H3BMG3	65 aa		12.21	□□□□□ -0.46
RFK-204	ENST00000479197	C10orf126	Q8N4M7	172 aa		12.21	□□□□□ -0.46
RFK-204	ENST00000479197	TRBV25-1	A0A075B6N4	114 aa		12.2	□□□□□ -0.46
RFK-204	ENST00000479197	SDHAF1	A6NFY7	115 aa		12.2	□□□□□ -0.46
RFK-204	ENST00000479197	PPP1R17	O96001	155 aa		12.2	□□□□□ -0.46
RFK-204	ENST00000479197	IGHV3-30	P01768	117 aa		12.2	□□□□□ -0.46
RFK-204	ENST00000479197	IGHV3-33	P01772	117 aa		12.2	□□□□□ -0.46
RFK-204	ENST00000479197	IGHV3-30-3	P0DP02	117 aa		12.2	□□□□□ -0.46
RFK-204	ENST00000479197	IGHV3-30-5	P0DP03	117 aa		12.2	□□□□□ -0.46
RFK-204	ENST00000479197	C6orf223	Q8N319	242 aa		12.2	□□□□□ -0.46
RFK-204	ENST00000479197	ST20	Q9HBF5	79 aa		12.2	□□□□□ -0.46
RFK-204	ENST00000479197	URGCP-MRPS24	S4R325	110 aa		12.2	□□□□□ -0.46
RFK-204	ENST00000479197	IGHV1-24	A0A0C4DH33	117 aa		12.19	□□□□□ -0.46
RFK-204	ENST00000479197	BTF3	P20290	206 aa	Known RBP	12.19	□□□□□ -0.46
RFK-204	ENST00000479197	CKS2	P33552	79 aa		12.19	□□□□□ -0.46
RFK-204	ENST00000479197	COTL1	Q14019	142 aa		12.19	□□□□□ -0.46
RFK-204	ENST00000479197	IQCJ	Q1A5X6	159 aa		12.19	□□□□□ -0.46
RFK-204	ENST00000479197	NIT1	Q86X76	327 aa		12.19	□□□□□ -0.46
RFK-204	ENST00000479197	NRAC	Q8N912	160 aa		12.19	□□□□□ -0.46
RFK-204	ENST00000479197	RTL8C	O15255	209 aa		12.18	□□□□□ -0.46
RFK-204	ENST00000479197		Q8N3U1	123 aa		12.18	□□□□□ -0.46
RFK-204	ENST00000479197	CHCHD5	Q9BSY4	110 aa		12.18	□□□□□ -0.46
RFK-204	ENST00000479197		D6R8Y8	96 aa		12.17	□□□□□ -0.46
RFK-204	ENST00000479197	DEFB104A	Q8WTQ1	72 aa		12.17	□□□□□ -0.46
RFK-204	ENST00000479197	TMEM70	Q9BUB7	260 aa		12.17	□□□□□ -0.46
RFK-204	ENST00000479197	CHCHD7	Q9BUK0	85 aa		12.17	□□□□□ -0.46
RFK-204	ENST00000479197	DNAH17	Q9UFH2	4485 aa		12.17	□□□□□ -0.46
RFK-204	ENST00000479197		A0A087WX48	190 aa		12.16	□□□□□ -0.46
RFK-204	ENST00000479197		I3L3M4	83 aa		12.16	□□□□□ -0.46
RFK-204	ENST00000479197	PPBP	P02775	128 aa		12.16	□□□□□ -0.46

Retrieved 100 of 20,778 RNA–protein pairs in 271.4 ms