RNA–Protein interactions for RNA: ENST00000478209.1

PDZRN3-207, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 4

Gene PDZRN3, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-207ENST00000478209 V9GYV3 84 aa11.19□□□□□ -0.62
PDZRN3-207ENST00000478209 HIGD1CA8MV81 97 aa11.18□□□□□ -0.62
PDZRN3-207ENST00000478209 LINC01556Q5JQF7 62 aa11.18□□□□□ -0.62
PDZRN3-207ENST00000478209 SUMO4Q6EEV6 95 aa11.18□□□□□ -0.62
PDZRN3-207ENST00000478209 M0QY20 66 aa11.17□□□□□ -0.62
PDZRN3-207ENST00000478209 DNAJC30Q96LL9 226 aa11.17□□□□□ -0.62
PDZRN3-207ENST00000478209 A0A1B0GUT8 65 aa11.16□□□□□ -0.62
PDZRN3-207ENST00000478209 RASL11AQ6T310 242 aa11.16□□□□□ -0.62
PDZRN3-207ENST00000478209 TNFRSF18Q9Y5U5 241 aa11.16□□□□□ -0.62
PDZRN3-207ENST00000478209 NFE4Q86UQ8 179 aa11.15□□□□□ -0.62
PDZRN3-207ENST00000478209 DNAH10Q8IVF4 4471 aa11.14□□□□□ -0.63
PDZRN3-207ENST00000478209 IGHV3-30P01768 117 aa11.14□□□□□ -0.63
PDZRN3-207ENST00000478209 IGHV3-33P01772 117 aa11.14□□□□□ -0.63
PDZRN3-207ENST00000478209 IGHV3-30-3P0DP02 117 aa11.14□□□□□ -0.63
PDZRN3-207ENST00000478209 IGHV3-30-5P0DP03 117 aa11.14□□□□□ -0.63
PDZRN3-207ENST00000478209 RIGQ13278 110 aa11.14□□□□□ -0.63
PDZRN3-207ENST00000478209 TMEM97Q5BJF2 176 aa11.14□□□□□ -0.63
PDZRN3-207ENST00000478209 DAZ4Q86SG3 579 aaKnown RBP11.14□□□□□ -0.63
PDZRN3-207ENST00000478209 DAZ3Q9NR90 486 aaKnown RBP11.14□□□□□ -0.63
PDZRN3-207ENST00000478209 NAT8BQ9UHF3 227 aa11.14□□□□□ -0.63
PDZRN3-207ENST00000478209 TNP2Q05952 138 aa11.13□□□□□ -0.63
PDZRN3-207ENST00000478209 PNRC1Q12796 327 aaPredicted RBP11.13□□□□□ -0.63
PDZRN3-207ENST00000478209 NUP35Q8NFH5 326 aa11.13□□□□□ -0.63
PDZRN3-207ENST00000478209 NIT2Q9NQR4 276 aa11.13□□□□□ -0.63
PDZRN3-207ENST00000478209 URGCP-MRPS24S4R325 110 aa11.13□□□□□ -0.63
PDZRN3-207ENST00000478209 TRBV6-8A0A0A6YYG3 113 aa11.12□□□□□ -0.63
PDZRN3-207ENST00000478209 UQCC3Q6UW78 93 aa11.12□□□□□ -0.63
PDZRN3-207ENST00000478209 A0A1B0GVY2 172 aa11.11□□□□□ -0.63
PDZRN3-207ENST00000478209 SMIM27A0A1W2PRY6 76 aa11.11□□□□□ -0.63
PDZRN3-207ENST00000478209 KCNIP4Q6PIL6 250 aa11.11□□□□□ -0.63
PDZRN3-207ENST00000478209 NIT1Q86X76 327 aa11.11□□□□□ -0.63
PDZRN3-207ENST00000478209 FRZBQ92765 325 aa11.11□□□□□ -0.63
PDZRN3-207ENST00000478209 TMEM191AQ9H0A3 160 aa11.11□□□□□ -0.63
PDZRN3-207ENST00000478209 TRAV26-2A0A0B4J265 109 aa11.1□□□□□ -0.63
PDZRN3-207ENST00000478209 IBA57-AS1B1ANH7 110 aa11.1□□□□□ -0.63
PDZRN3-207ENST00000478209 PPP1R2P9O14990 202 aa11.1□□□□□ -0.63
PDZRN3-207ENST00000478209 Q6ZRN7 208 aaPredicted RBP11.1□□□□□ -0.63
PDZRN3-207ENST00000478209 GATD1Q8NB37 220 aa11.1□□□□□ -0.63
PDZRN3-207ENST00000478209 A0A087WX48 190 aa11.09□□□□□ -0.63
PDZRN3-207ENST00000478209 PKIAP61925 76 aa11.09□□□□□ -0.63
PDZRN3-207ENST00000478209 Q8N3U1 123 aa11.09□□□□□ -0.63
PDZRN3-207ENST00000478209 CHCHD5Q9BSY4 110 aa11.09□□□□□ -0.63
PDZRN3-207ENST00000478209 CHCHD7Q9BUK0 85 aa11.09□□□□□ -0.63
PDZRN3-207ENST00000478209 FRAS1Q86XX4 4008 aa11.09□□□□□ -0.63
PDZRN3-207ENST00000478209 TRBV25-1A0A075B6N4 114 aa11.08□□□□□ -0.64
PDZRN3-207ENST00000478209 LAGE3Q14657 143 aa11.08□□□□□ -0.64
PDZRN3-207ENST00000478209 Q9HAA7 133 aa11.08□□□□□ -0.64
PDZRN3-207ENST00000478209 EPPK1P58107 5090 aaKnown RBP11.08□□□□□ -0.64
PDZRN3-207ENST00000478209 IGHV1-24A0A0C4DH33 117 aa11.07□□□□□ -0.64
PDZRN3-207ENST00000478209 TMEM262E9PQX1 116 aa11.07□□□□□ -0.64
PDZRN3-207ENST00000478209 MT-ND4LP03901 98 aa11.07□□□□□ -0.64
PDZRN3-207ENST00000478209 ELOBQ15370 118 aa11.07□□□□□ -0.64
PDZRN3-207ENST00000478209 NTM-AS1Q6ZSK4 140 aa11.07□□□□□ -0.64
PDZRN3-207ENST00000478209 COMMD7Q86VX2 200 aa11.07□□□□□ -0.64
PDZRN3-207ENST00000478209 ANAPC16Q96DE5 110 aa11.07□□□□□ -0.64
PDZRN3-207ENST00000478209 A0A1B0GW15 77 aa11.06□□□□□ -0.64
PDZRN3-207ENST00000478209 S100A8P05109 93 aa11.06□□□□□ -0.64
PDZRN3-207ENST00000478209 IQCJQ1A5X6 159 aa11.06□□□□□ -0.64
PDZRN3-207ENST00000478209 AMN1Q8IY45 258 aa11.06□□□□□ -0.64
PDZRN3-207ENST00000478209 RPL39LQ96EH5 51 aaKnown RBP11.06□□□□□ -0.64
PDZRN3-207ENST00000478209 MRAP2Q96G30 205 aa11.06□□□□□ -0.64
PDZRN3-207ENST00000478209 TRAV8-3A0A0A6YYJ7 113 aa11.05□□□□□ -0.64
PDZRN3-207ENST00000478209 TMEM218A2RU14 115 aa11.05□□□□□ -0.64
PDZRN3-207ENST00000478209 F8W036 122 aa11.05□□□□□ -0.64
PDZRN3-207ENST00000478209 PSCAO43653 123 aa11.05□□□□□ -0.64
PDZRN3-207ENST00000478209 RAB4AP20338 218 aa11.05□□□□□ -0.64
PDZRN3-207ENST00000478209 CAMPP49913 170 aa11.05□□□□□ -0.64
PDZRN3-207ENST00000478209 COTL1Q14019 142 aa11.05□□□□□ -0.64
PDZRN3-207ENST00000478209 RNF185Q96GF1 192 aa11.05□□□□□ -0.64
PDZRN3-207ENST00000478209 EREGO14944 169 aa11.04□□□□□ -0.64
PDZRN3-207ENST00000478209 MRPL54Q6P161 138 aaKnown RBP11.04□□□□□ -0.64
PDZRN3-207ENST00000478209 TM2D2Q9BX73 214 aa11.04□□□□□ -0.64
PDZRN3-207ENST00000478209 KLK12Q9UKR0 248 aa11.04□□□□□ -0.64
PDZRN3-207ENST00000478209 DNAH2Q9P225 4427 aa11.04□□□□□ -0.64
PDZRN3-207ENST00000478209 DNAH17Q9UFH2 4485 aa11.03□□□□□ -0.64
PDZRN3-207ENST00000478209 SDHAF1A6NFY7 115 aa11.03□□□□□ -0.64
PDZRN3-207ENST00000478209 ADCYAP1P18509 176 aa11.03□□□□□ -0.64
PDZRN3-207ENST00000478209 HBBP68871 147 aa11.03□□□□□ -0.64
PDZRN3-207ENST00000478209 GAGE6Q13070 117 aa11.03□□□□□ -0.64
PDZRN3-207ENST00000478209 MPV17L2Q567V2 206 aa11.03□□□□□ -0.64
PDZRN3-207ENST00000478209 TMEM243Q9BU79 118 aa11.03□□□□□ -0.64
PDZRN3-207ENST00000478209 BIRC6Q9NR09 4857 aa11.03□□□□□ -0.64
PDZRN3-207ENST00000478209 TRBV6-5A0A0K0K1A5 114 aa11.02□□□□□ -0.65
PDZRN3-207ENST00000478209 LINC00862A6NCI5 91 aa11.02□□□□□ -0.65
PDZRN3-207ENST00000478209 AMTP48728 403 aa11.02□□□□□ -0.65
PDZRN3-207ENST00000478209 FAM104BQ5XKR9 115 aa11.02□□□□□ -0.65
PDZRN3-207ENST00000478209 ATRAIDQ6UW56 229 aa11.02□□□□□ -0.65
PDZRN3-207ENST00000478209 UBE2WQ96B02 151 aa11.02□□□□□ -0.65
PDZRN3-207ENST00000478209 RMI2Q96E14 147 aa11.02□□□□□ -0.65
PDZRN3-207ENST00000478209 SEC11CQ9BY50 192 aa11.02□□□□□ -0.65
PDZRN3-207ENST00000478209 ST20Q9HBF5 79 aa11.02□□□□□ -0.65
PDZRN3-207ENST00000478209 NCR2O95944 276 aa11.01□□□□□ -0.65
PDZRN3-207ENST00000478209 PPP1R17O96001 155 aa11.01□□□□□ -0.65
PDZRN3-207ENST00000478209 CRPP02741 224 aa11.01□□□□□ -0.65
PDZRN3-207ENST00000478209 ATP5L2Q7Z4Y8 100 aa11.01□□□□□ -0.65
PDZRN3-207ENST00000478209 DEFB104AQ8WTQ1 72 aa11.01□□□□□ -0.65
PDZRN3-207ENST00000478209 FAT2Q9NYQ8 4349 aa11□□□□□ -0.65
PDZRN3-207ENST00000478209 A0A087WTM6 91 aa11□□□□□ -0.65
PDZRN3-207ENST00000478209 A0A1B0GXF2 115 aa11□□□□□ -0.65
PDZRN3-207ENST00000478209 UBE2L6O14933 153 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms