RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 OR5AL1P0C617 328 aa10.78□□□□□ -0.68
TRIM13-208ENST00000478111 MBD3L1Q8WWY6 194 aa10.78□□□□□ -0.68
TRIM13-208ENST00000478111 VAX2Q9UIW0 290 aa10.78□□□□□ -0.68
TRIM13-208ENST00000478111 SCO2A0A1W2PP80 73 aa10.77□□□□□ -0.69
TRIM13-208ENST00000478111 S100A9P06702 114 aaKnown RBP10.77□□□□□ -0.69
TRIM13-208ENST00000478111 MIAQ16674 131 aa10.77□□□□□ -0.69
TRIM13-208ENST00000478111 CHCHD5Q9BSY4 110 aa10.77□□□□□ -0.69
TRIM13-208ENST00000478111 PRR34Q9NV39 138 aa10.77□□□□□ -0.69
TRIM13-208ENST00000478111 HLA-DQA1P01909 254 aa10.76□□□□□ -0.69
TRIM13-208ENST00000478111 HNRNPA3P51991 378 aaKnown RBP10.76□□□□□ -0.69
TRIM13-208ENST00000478111 BAGE2Q86Y30 109 aa10.76□□□□□ -0.69
TRIM13-208ENST00000478111 C9orf163Q8N9P6 203 aa10.76□□□□□ -0.69
TRIM13-208ENST00000478111 SFT2D1Q8WV19 159 aa10.76□□□□□ -0.69
TRIM13-208ENST00000478111 DAZAP1Q96EP5 407 aaKnown RBP10.76□□□□□ -0.69
TRIM13-208ENST00000478111 SMLR1H3BR10 107 aa10.75□□□□□ -0.69
TRIM13-208ENST00000478111 PANO1I0J062 215 aa10.75□□□□□ -0.69
TRIM13-208ENST00000478111 RBX1P62877 108 aa10.75□□□□□ -0.69
TRIM13-208ENST00000478111 SPANXN1Q5VSR9 72 aa10.75□□□□□ -0.69
TRIM13-208ENST00000478111 DGAT2L7PQ6IED9 249 aa10.75□□□□□ -0.69
TRIM13-208ENST00000478111 A0A1B0GV50 99 aa10.74□□□□□ -0.69
TRIM13-208ENST00000478111 F5H697 171 aa10.74□□□□□ -0.69
TRIM13-208ENST00000478111 RPL37AP61513 92 aaKnown RBP10.74□□□□□ -0.69
TRIM13-208ENST00000478111 PKIAP61925 76 aa10.74□□□□□ -0.69
TRIM13-208ENST00000478111 KCNRGQ8N5I3 272 aa10.74□□□□□ -0.69
TRIM13-208ENST00000478111 FAM213BQ8TBF2 198 aa10.74□□□□□ -0.69
TRIM13-208ENST00000478111 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.74□□□□□ -0.69
TRIM13-208ENST00000478111 SSTP61278 116 aa10.73□□□□□ -0.69
TRIM13-208ENST00000478111 GAGE6Q13070 117 aa10.73□□□□□ -0.69
TRIM13-208ENST00000478111 TMEM97Q5BJF2 176 aa10.73□□□□□ -0.69
TRIM13-208ENST00000478111 CLPSL2Q6UWE3 100 aa10.73□□□□□ -0.69
TRIM13-208ENST00000478111 TMUB2Q71RG4 321 aa10.73□□□□□ -0.69
TRIM13-208ENST00000478111 LINC00269Q8N2A0 174 aa10.73□□□□□ -0.69
TRIM13-208ENST00000478111 DERL1Q9BUN8 251 aa10.73□□□□□ -0.69
TRIM13-208ENST00000478111 UMAD1C9J7I0 102 aa10.72□□□□□ -0.69
TRIM13-208ENST00000478111 ZNF345Q14585 488 aa10.72□□□□□ -0.69
TRIM13-208ENST00000478111 SDIM1Q6ZPB5 146 aa10.72□□□□□ -0.69
TRIM13-208ENST00000478111 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.72□□□□□ -0.69
TRIM13-208ENST00000478111 IQCJQ1A5X6 159 aa10.71□□□□□ -0.69
TRIM13-208ENST00000478111 TRBV25-1A0A075B6N4 114 aa10.7□□□□□ -0.7
TRIM13-208ENST00000478111 M0QY20 66 aa10.7□□□□□ -0.7
TRIM13-208ENST00000478111 PFDN1O60925 122 aa10.7□□□□□ -0.7
TRIM13-208ENST00000478111 RPL35P42766 123 aaKnown RBP10.7□□□□□ -0.7
TRIM13-208ENST00000478111 AP1S3Q96PC3 154 aa10.7□□□□□ -0.7
TRIM13-208ENST00000478111 IGLC6P0CF74 106 aa10.69□□□□□ -0.7
TRIM13-208ENST00000478111 SMIM17P0DL12 118 aa10.69□□□□□ -0.7
TRIM13-208ENST00000478111 GZMBP10144 247 aa10.69□□□□□ -0.7
TRIM13-208ENST00000478111 C20orf203Q8NBC4 194 aa10.69□□□□□ -0.7
TRIM13-208ENST00000478111 TNXBP22105 4242 aa10.69□□□□□ -0.7
TRIM13-208ENST00000478111 IGHV1-24A0A0C4DH33 117 aa10.68□□□□□ -0.7
TRIM13-208ENST00000478111 H2AFB1P0C5Y9 115 aa10.68□□□□□ -0.7
TRIM13-208ENST00000478111 CCL20P78556 96 aa10.68□□□□□ -0.7
TRIM13-208ENST00000478111 REG3AQ06141 175 aa10.68□□□□□ -0.7
TRIM13-208ENST00000478111 CLRN3Q8NCR9 226 aa10.68□□□□□ -0.7
TRIM13-208ENST00000478111 C11orf52Q96A22 123 aa10.68□□□□□ -0.7
TRIM13-208ENST00000478111 PLA2G2DQ9UNK4 145 aa10.68□□□□□ -0.7
TRIM13-208ENST00000478111 IGLV10-54A0A075B6I4 117 aa10.67□□□□□ -0.7
TRIM13-208ENST00000478111 HMSDA8MTL9 139 aa10.67□□□□□ -0.7
TRIM13-208ENST00000478111 CNBPP62633 177 aaKnown RBP10.67□□□□□ -0.7
TRIM13-208ENST00000478111 CIRBPQ14011 172 aaKnown RBP10.67□□□□□ -0.7
TRIM13-208ENST00000478111 SUMO4Q6EEV6 95 aa10.67□□□□□ -0.7
TRIM13-208ENST00000478111 GFRA4Q9GZZ7 299 aa10.67□□□□□ -0.7
TRIM13-208ENST00000478111 IGLV4-60A0A075B6I1 120 aa10.66□□□□□ -0.7
TRIM13-208ENST00000478111 C19orf71A6NCJ1 209 aa10.66□□□□□ -0.7
TRIM13-208ENST00000478111 BCL2L11O43521 198 aa10.66□□□□□ -0.7
TRIM13-208ENST00000478111 SLPIP03973 132 aa10.66□□□□□ -0.7
TRIM13-208ENST00000478111 MT1HL1P0DM35 61 aa10.66□□□□□ -0.7
TRIM13-208ENST00000478111 RGS21Q2M5E4 152 aa10.66□□□□□ -0.7
TRIM13-208ENST00000478111 A0A0D9SG52 128 aa10.65□□□□□ -0.7
TRIM13-208ENST00000478111 A0A1B0GUV1 79 aa10.65□□□□□ -0.7
TRIM13-208ENST00000478111 MGPP08493 103 aa10.65□□□□□ -0.7
TRIM13-208ENST00000478111 FER1L6-AS1Q8NA97 138 aa10.65□□□□□ -0.7
TRIM13-208ENST00000478111 TRAV8-4A0A0B4J246 113 aa10.64□□□□□ -0.71
TRIM13-208ENST00000478111 H7C1H1 209 aa10.64□□□□□ -0.71
TRIM13-208ENST00000478111 P01737 135 aa10.64□□□□□ -0.71
TRIM13-208ENST00000478111 NKX2-5P52952 324 aaPredicted RBP10.64□□□□□ -0.71
TRIM13-208ENST00000478111 CENPWQ5EE01 88 aa10.64□□□□□ -0.71
TRIM13-208ENST00000478111 OR2D3Q8NGH3 330 aa10.64□□□□□ -0.71
TRIM13-208ENST00000478111 TPPP3Q9BW30 176 aa10.64□□□□□ -0.71
TRIM13-208ENST00000478111 KANTRA0A1W2PQU2 76 aa10.63□□□□□ -0.71
TRIM13-208ENST00000478111 hDV102S1A0JD36 115 aa10.63□□□□□ -0.71
TRIM13-208ENST00000478111 RAB19A4D1S5 217 aa10.63□□□□□ -0.71
TRIM13-208ENST00000478111 CACNG7P62955 275 aa10.63□□□□□ -0.71
TRIM13-208ENST00000478111 RASL11AQ6T310 242 aa10.63□□□□□ -0.71
TRIM13-208ENST00000478111 MANBALQ9NQG1 85 aa10.63□□□□□ -0.71
TRIM13-208ENST00000478111 GNG13Q9P2W3 67 aa10.63□□□□□ -0.71
TRIM13-208ENST00000478111 LRP2P98164 4655 aa10.63□□□□□ -0.71
TRIM13-208ENST00000478111 TRAV1-1A0A0B4J248 108 aa10.62□□□□□ -0.71
TRIM13-208ENST00000478111 RPS20P60866 119 aaKnown RBP10.62□□□□□ -0.71
TRIM13-208ENST00000478111 PGLYRP4Q96LB8 373 aa10.62□□□□□ -0.71
TRIM13-208ENST00000478111 TMEM243Q9BU79 118 aa10.62□□□□□ -0.71
TRIM13-208ENST00000478111 TRBV20OR9-2A0A075B6H5 130 aa10.61□□□□□ -0.71
TRIM13-208ENST00000478111 RAB5CP51148 216 aa10.61□□□□□ -0.71
TRIM13-208ENST00000478111 NIT2Q9NQR4 276 aa10.61□□□□□ -0.71
TRIM13-208ENST00000478111 F2Z2F3 143 aa10.6□□□□□ -0.71
TRIM13-208ENST00000478111 CHTF8P0CG12 524 aa10.6□□□□□ -0.71
TRIM13-208ENST00000478111 NTF3P20783 257 aa10.6□□□□□ -0.71
TRIM13-208ENST00000478111 EIF5AP63241 154 aaKnown RBP10.6□□□□□ -0.71
TRIM13-208ENST00000478111 LYZL1Q6UWQ5 148 aa10.6□□□□□ -0.71
TRIM13-208ENST00000478111 Q6ZRU5 148 aa10.6□□□□□ -0.71
TRIM13-208ENST00000478111 SMIM12Q96EX1 92 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms