RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 MLLT11Q13015 90 aaPredicted RBP2.43□□□□□ -2.02
VPS50-214ENST00000477935 CFAP126Q5VTH2 177 aa2.43□□□□□ -2.02
VPS50-214ENST00000477935 CYP2G1PQ6ZSU1 146 aa2.43□□□□□ -2.02
VPS50-214ENST00000477935 ZFAND2AQ8N6M9 145 aa2.43□□□□□ -2.02
VPS50-214ENST00000477935 TERB2Q8NHR7 220 aa2.43□□□□□ -2.02
VPS50-214ENST00000477935 CYGBQ8WWM9 190 aa2.43□□□□□ -2.02
VPS50-214ENST00000477935 DEDD2Q8WXF8 326 aa2.43□□□□□ -2.02
VPS50-214ENST00000477935 ARV1Q9H2C2 271 aa2.43□□□□□ -2.02
VPS50-214ENST00000477935 ZNF492Q9P255 531 aa2.43□□□□□ -2.02
VPS50-214ENST00000477935 TRAV8-4A0A0B4J246 113 aa2.42□□□□□ -2.02
VPS50-214ENST00000477935 PIGBOS1A0A0B4J2F0 54 aa2.42□□□□□ -2.02
VPS50-214ENST00000477935 MUC21A0A0G2JKD1 596 aa2.42□□□□□ -2.02
VPS50-214ENST00000477935 TRDV1A0A1B0GX56 115 aa2.42□□□□□ -2.02
VPS50-214ENST00000477935 P01737 135 aa2.42□□□□□ -2.02
VPS50-214ENST00000477935 ANGP03950 147 aaKnown RBP2.42□□□□□ -2.02
VPS50-214ENST00000477935 LINC00869P0C866 280 aa2.42□□□□□ -2.02
VPS50-214ENST00000477935 IGLC2P0DOY2 106 aa2.42□□□□□ -2.02
VPS50-214ENST00000477935 MT1HP80294 61 aa2.42□□□□□ -2.02
VPS50-214ENST00000477935 AKR1C1Q04828 323 aa2.42□□□□□ -2.02
VPS50-214ENST00000477935 ERCC8Q13216 396 aa2.42□□□□□ -2.02
VPS50-214ENST00000477935 ZNF266Q14584 549 aa2.42□□□□□ -2.02
VPS50-214ENST00000477935 SP6Q3SY56 376 aa2.42□□□□□ -2.02
VPS50-214ENST00000477935 C1orf137Q5JT78 98 aa2.42□□□□□ -2.02
VPS50-214ENST00000477935 Q6AWC8 147 aa2.42□□□□□ -2.02
VPS50-214ENST00000477935 ZFP1Q6P2D0 407 aa2.42□□□□□ -2.02
VPS50-214ENST00000477935 KRTAP26-1Q6PEX3 210 aa2.42□□□□□ -2.02
VPS50-214ENST00000477935 LINC00305Q7Z4B0 112 aa2.42□□□□□ -2.02
VPS50-214ENST00000477935 PCP2Q8IVA1 136 aa2.42□□□□□ -2.02
VPS50-214ENST00000477935 OR13C8Q8NGS7 320 aa2.42□□□□□ -2.02
VPS50-214ENST00000477935 SUN5Q8TC36 379 aa2.42□□□□□ -2.02
VPS50-214ENST00000477935 PTH2Q96A98 100 aa2.42□□□□□ -2.02
VPS50-214ENST00000477935 S100A16Q96FQ6 103 aaKnown RBP2.42□□□□□ -2.02
VPS50-214ENST00000477935 KCNS1Q96KK3 526 aa2.42□□□□□ -2.02
VPS50-214ENST00000477935 ARL6Q9H0F7 186 aa2.42□□□□□ -2.02
VPS50-214ENST00000477935 IGHV3-73A0A0B4J1V6 119 aa2.41□□□□□ -2.02
VPS50-214ENST00000477935 H3BQ15 152 aa2.41□□□□□ -2.02
VPS50-214ENST00000477935 K7EPK0 472 aa2.41□□□□□ -2.02
VPS50-214ENST00000477935 IGLV7-43P04211 117 aa2.41□□□□□ -2.02
VPS50-214ENST00000477935 PRSS3P35030 304 aa2.41□□□□□ -2.02
VPS50-214ENST00000477935 TAGLN2P37802 199 aaKnown RBP2.41□□□□□ -2.02
VPS50-214ENST00000477935 PDE6HQ13956 83 aa2.41□□□□□ -2.02
VPS50-214ENST00000477935 SURF2Q15527 256 aaPredicted RBP2.41□□□□□ -2.02
VPS50-214ENST00000477935 IGFL1Q6UW32 110 aa2.41□□□□□ -2.02
VPS50-214ENST00000477935 PATE2Q6UY27 113 aa2.41□□□□□ -2.02
VPS50-214ENST00000477935 SELENOHQ8IZQ5 122 aaKnown RBP2.41□□□□□ -2.02
VPS50-214ENST00000477935 C8orf59Q8N0T1 100 aaPredicted RBP2.41□□□□□ -2.02
VPS50-214ENST00000477935 LINC00337Q8N6G1 96 aa2.41□□□□□ -2.02
VPS50-214ENST00000477935 GLYATL2Q8WU03 294 aa2.41□□□□□ -2.02
VPS50-214ENST00000477935 PYDC1Q8WXC3 89 aa2.41□□□□□ -2.02
VPS50-214ENST00000477935 CIB3Q96Q77 187 aaPredicted RBP2.41□□□□□ -2.02
VPS50-214ENST00000477935 SCN3BQ9NY72 215 aa2.41□□□□□ -2.02
VPS50-214ENST00000477935 LENEPQ9Y5L5 61 aa2.41□□□□□ -2.02
VPS50-214ENST00000477935 A0A096LNI7 61 aa2.4□□□□□ -2.03
VPS50-214ENST00000477935 LOC100506127A0A0U1RQW1 187 aa2.4□□□□□ -2.03
VPS50-214ENST00000477935 A8MWV9 139 aa2.4□□□□□ -2.03
VPS50-214ENST00000477935 M0R3E3 92 aa2.4□□□□□ -2.03
VPS50-214ENST00000477935 GNRH2O43555 120 aa2.4□□□□□ -2.03
VPS50-214ENST00000477935 SMCO1Q147U7 214 aa2.4□□□□□ -2.03
VPS50-214ENST00000477935 KRTAP6-3Q3LI67 103 aa2.4□□□□□ -2.03
VPS50-214ENST00000477935 C5orf47Q569G3 176 aa2.4□□□□□ -2.03
VPS50-214ENST00000477935 PRR9Q5T870 116 aa2.4□□□□□ -2.03
VPS50-214ENST00000477935 LHFPL1Q86WI0 220 aa2.4□□□□□ -2.03
VPS50-214ENST00000477935 C12orf45Q8N5I9 185 aaPredicted RBP2.4□□□□□ -2.03
VPS50-214ENST00000477935 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.4□□□□□ -2.03
VPS50-214ENST00000477935 GPX8Q8TED1 209 aa2.4□□□□□ -2.03
VPS50-214ENST00000477935 TSKUQ8WUA8 353 aa2.4□□□□□ -2.03
VPS50-214ENST00000477935 NPVFQ9HCQ7 196 aa2.4□□□□□ -2.03
VPS50-214ENST00000477935 LINC00846Q9NV44 126 aa2.4□□□□□ -2.03
VPS50-214ENST00000477935 PAIP2BQ9ULR5 123 aaKnown RBP2.4□□□□□ -2.03
VPS50-214ENST00000477935 TIMM9Q9Y5J7 89 aa2.4□□□□□ -2.03
VPS50-214ENST00000477935 TRBV19A0A075B6N1 114 aa2.39□□□□□ -2.03
VPS50-214ENST00000477935 TRBV6-8A0A0A6YYG3 113 aa2.39□□□□□ -2.03
VPS50-214ENST00000477935 TRAV21A0A0B4J279 112 aa2.39□□□□□ -2.03
VPS50-214ENST00000477935 RBAKDNA6NC62 111 aa2.39□□□□□ -2.03
VPS50-214ENST00000477935 FNDC10F2Z333 226 aa2.39□□□□□ -2.03
VPS50-214ENST00000477935 M0R2T5 61 aa2.39□□□□□ -2.03
VPS50-214ENST00000477935 GOSR2O14653 212 aa2.39□□□□□ -2.03
VPS50-214ENST00000477935 COX7A2P2O60397 106 aa2.39□□□□□ -2.03
VPS50-214ENST00000477935 EIF3GO75821 320 aaKnown RBP eCLIP2.39□□□□□ -2.03
VPS50-214ENST00000477935 CIB2O75838 187 aa2.39□□□□□ -2.03
VPS50-214ENST00000477935 RAB2AP61019 212 aa2.39□□□□□ -2.03
VPS50-214ENST00000477935 EIF5AP63241 154 aaKnown RBP2.39□□□□□ -2.03
VPS50-214ENST00000477935 MPV17L2Q567V2 206 aa2.39□□□□□ -2.03
VPS50-214ENST00000477935 C10orf113Q5VZT2 155 aa2.39□□□□□ -2.03
VPS50-214ENST00000477935 C22orf42Q6IC83 251 aa2.39□□□□□ -2.03
VPS50-214ENST00000477935 LINC00269Q8N2A0 174 aa2.39□□□□□ -2.03
VPS50-214ENST00000477935 OR2T35Q8NGX2 323 aa2.39□□□□□ -2.03
VPS50-214ENST00000477935 DUSP21Q9H596 190 aa2.39□□□□□ -2.03
VPS50-214ENST00000477935 NAA60Q9H7X0 242 aa2.39□□□□□ -2.03
VPS50-214ENST00000477935 TRBV7-3A0A075B6L6 115 aa2.38□□□□□ -2.03
VPS50-214ENST00000477935 A0A0B4J2A0 478 aa2.38□□□□□ -2.03
VPS50-214ENST00000477935 TRBV10-1A0A0K0K1A3 114 aa2.38□□□□□ -2.03
VPS50-214ENST00000477935 A0A1B0GVG6 124 aa2.38□□□□□ -2.03
VPS50-214ENST00000477935 SMCO3A2RU48 225 aa2.38□□□□□ -2.03
VPS50-214ENST00000477935 TYMSP04818 313 aa2.38□□□□□ -2.03
VPS50-214ENST00000477935 CSN1S1P47710 185 aa2.38□□□□□ -2.03
VPS50-214ENST00000477935 TMEM97Q5BJF2 176 aa2.38□□□□□ -2.03
VPS50-214ENST00000477935 OR5H6Q8NGV6 325 aa2.38□□□□□ -2.03
VPS50-214ENST00000477935 RAB2BQ8WUD1 216 aa2.38□□□□□ -2.03
VPS50-214ENST00000477935 ASB13Q8WXK3 278 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 197 ms