RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 LAGE3Q14657 143 aa8.6□□□□□ -1.03
PRPF39-203ENST00000477626 SYT8Q8NBV8 401 aa8.6□□□□□ -1.03
PRPF39-203ENST00000477626 ODF1Q14990 250 aa8.6□□□□□ -1.03
PRPF39-203ENST00000477626 SAMD5Q5TGI4 173 aa8.6□□□□□ -1.03
PRPF39-203ENST00000477626 LGALS9CQ6DKI2 356 aa8.6□□□□□ -1.03
PRPF39-203ENST00000477626 NEXN-AS1Q8NBZ9 246 aa8.6□□□□□ -1.03
PRPF39-203ENST00000477626 TIMM8BQ9Y5J9 83 aaPredicted RBP8.6□□□□□ -1.03
PRPF39-203ENST00000477626 LINC00587B1AMM8 73 aa8.59□□□□□ -1.03
PRPF39-203ENST00000477626 TCAPO15273 167 aa8.59□□□□□ -1.03
PRPF39-203ENST00000477626 Q8NAQ8 132 aa8.59□□□□□ -1.03
PRPF39-203ENST00000477626 LINC01587Q99440 93 aa8.59□□□□□ -1.03
PRPF39-203ENST00000477626 PPP1R17O96001 155 aa8.59□□□□□ -1.03
PRPF39-203ENST00000477626 PKIAP61925 76 aa8.59□□□□□ -1.03
PRPF39-203ENST00000477626 PRSS3P2Q8NHM4 247 aa8.59□□□□□ -1.03
PRPF39-203ENST00000477626 CSTL1Q9H114 145 aa8.59□□□□□ -1.03
PRPF39-203ENST00000477626 NBEAL2Q6ZNJ1 2754 aa8.59□□□□□ -1.03
PRPF39-203ENST00000477626 TRAV4A0A0B4J268 109 aa8.59□□□□□ -1.03
PRPF39-203ENST00000477626 Q6ZTI0 123 aa8.59□□□□□ -1.03
PRPF39-203ENST00000477626 SBSPONQ8IVN8 264 aa8.59□□□□□ -1.03
PRPF39-203ENST00000477626 MRPL16Q9NX20 251 aaKnown RBP8.59□□□□□ -1.03
PRPF39-203ENST00000477626 TENM3Q9P273 2699 aa8.59□□□□□ -1.04
PRPF39-203ENST00000477626 CHCHD7Q9BUK0 85 aa8.58□□□□□ -1.04
PRPF39-203ENST00000477626 FGF6P10767 208 aa8.58□□□□□ -1.04
PRPF39-203ENST00000477626 FA2HQ7L5A8 372 aa8.58□□□□□ -1.04
PRPF39-203ENST00000477626 NUTF2P61970 127 aaKnown RBP8.58□□□□□ -1.04
PRPF39-203ENST00000477626 HSPB8Q9UJY1 196 aa8.58□□□□□ -1.04
PRPF39-203ENST00000477626 C1QTNF4Q9BXJ3 329 aa8.57□□□□□ -1.04
PRPF39-203ENST00000477626 TRAV12-1A0A0B4J245 112 aa8.57□□□□□ -1.04
PRPF39-203ENST00000477626 ZNF479Q96JC4 524 aa8.57□□□□□ -1.04
PRPF39-203ENST00000477626 RPL35AP18077 110 aaKnown RBP8.57□□□□□ -1.04
PRPF39-203ENST00000477626 KRTDAPP60985 99 aa8.57□□□□□ -1.04
PRPF39-203ENST00000477626 SMIM15Q7Z3B0 74 aa8.57□□□□□ -1.04
PRPF39-203ENST00000477626 SMIM17P0DL12 118 aa8.56□□□□□ -1.04
PRPF39-203ENST00000477626 SDHAF1A6NFY7 115 aa8.56□□□□□ -1.04
PRPF39-203ENST00000477626 SMIM9A6NGZ8 99 aa8.56□□□□□ -1.04
PRPF39-203ENST00000477626 FHL2Q14192 279 aa8.56□□□□□ -1.04
PRPF39-203ENST00000477626 NEGR1Q7Z3B1 354 aa8.56□□□□□ -1.04
PRPF39-203ENST00000477626 PLECQ15149 4684 aaKnown RBP8.56□□□□□ -1.04
PRPF39-203ENST00000477626 IGLV4-69A0A075B6H9 119 aa8.55□□□□□ -1.04
PRPF39-203ENST00000477626 NBEAL1Q6ZS30 2694 aa8.55□□□□□ -1.04
PRPF39-203ENST00000477626 STARD9Q9P2P6 4700 aa8.55□□□□□ -1.04
PRPF39-203ENST00000477626 IGHV4-30-4P0DP06 118 aa8.55□□□□□ -1.04
PRPF39-203ENST00000477626 DNAJC30Q96LL9 226 aa8.55□□□□□ -1.04
PRPF39-203ENST00000477626 RHODO00212 210 aa8.55□□□□□ -1.04
PRPF39-203ENST00000477626 MGPP08493 103 aa8.55□□□□□ -1.04
PRPF39-203ENST00000477626 RHOHQ15669 191 aa8.55□□□□□ -1.04
PRPF39-203ENST00000477626 ORMDL2Q53FV1 153 aa8.55□□□□□ -1.04
PRPF39-203ENST00000477626 GTSCR1Q86UQ5 136 aa8.55□□□□□ -1.04
PRPF39-203ENST00000477626 IFI27L1Q96BM0 104 aa8.55□□□□□ -1.04
PRPF39-203ENST00000477626 RNF183Q96D59 192 aa8.55□□□□□ -1.04
PRPF39-203ENST00000477626 ST20Q9HBF5 79 aa8.55□□□□□ -1.04
PRPF39-203ENST00000477626 TRAV9-2A0A087WT02 112 aa8.54□□□□□ -1.04
PRPF39-203ENST00000477626 NPSP0C0P6 89 aa8.54□□□□□ -1.04
PRPF39-203ENST00000477626 IGLC3P0DOY3 106 aa8.54□□□□□ -1.04
PRPF39-203ENST00000477626 GOLT1BQ9Y3E0 138 aa8.54□□□□□ -1.04
PRPF39-203ENST00000477626 VCYO14598 125 aa8.54□□□□□ -1.04
PRPF39-203ENST00000477626 SCGB1D1O95968 90 aa8.54□□□□□ -1.04
PRPF39-203ENST00000477626 CTAG1AP78358 180 aa8.54□□□□□ -1.04
PRPF39-203ENST00000477626 NTM-AS1Q6ZSK4 140 aa8.54□□□□□ -1.04
PRPF39-203ENST00000477626 BAALCQ8WXS3 180 aa8.54□□□□□ -1.04
PRPF39-203ENST00000477626 CIDEAO60543 219 aa8.54□□□□□ -1.04
PRPF39-203ENST00000477626 C20orf202A1L168 122 aa8.53□□□□□ -1.04
PRPF39-203ENST00000477626 UBE2D3P61077 147 aa8.53□□□□□ -1.04
PRPF39-203ENST00000477626 UBE2D2P62837 147 aa8.53□□□□□ -1.04
PRPF39-203ENST00000477626 OXLD1Q5BKU9 147 aa8.53□□□□□ -1.04
PRPF39-203ENST00000477626 TIMM17AQ99595 171 aa8.53□□□□□ -1.04
PRPF39-203ENST00000477626 DKK2Q9UBU2 259 aa8.53□□□□□ -1.04
PRPF39-203ENST00000477626 FAM19A3Q7Z5A8 133 aa8.53□□□□□ -1.04
PRPF39-203ENST00000477626 C14orf144Q96I85 54 aa8.53□□□□□ -1.04
PRPF39-203ENST00000477626 MAP1LC3CQ9BXW4 147 aa8.53□□□□□ -1.04
PRPF39-203ENST00000477626 C20orf203Q8NBC4 194 aa8.53□□□□□ -1.04
PRPF39-203ENST00000477626 AMELXQ99217 191 aa8.53□□□□□ -1.04
PRPF39-203ENST00000477626 NOP10Q9NPE3 64 aaKnown RBP8.53□□□□□ -1.04
PRPF39-203ENST00000477626 PYGO1Q9Y3Y4 419 aa8.53□□□□□ -1.04
PRPF39-203ENST00000477626 DDTP30046 118 aa8.52□□□□□ -1.05
PRPF39-203ENST00000477626 SLC25A29Q8N8R3 303 aa8.52□□□□□ -1.05
PRPF39-203ENST00000477626 A0A087WX48 190 aa8.52□□□□□ -1.05
PRPF39-203ENST00000477626 C2orf66Q6UXQ4 117 aa8.52□□□□□ -1.05
PRPF39-203ENST00000477626 DNAH6Q9C0G6 4158 aa8.52□□□□□ -1.05
PRPF39-203ENST00000477626 TRBV10-1A0A0K0K1A3 114 aa8.51□□□□□ -1.05
PRPF39-203ENST00000477626 I3L3M4 83 aa8.51□□□□□ -1.05
PRPF39-203ENST00000477626 ERASQ7Z444 233 aa8.51□□□□□ -1.05
PRPF39-203ENST00000477626 VPS13DQ5THJ4 4388 aa8.51□□□□□ -1.05
PRPF39-203ENST00000477626 TRBV6-4A0A1B0GX49 114 aa8.51□□□□□ -1.05
PRPF39-203ENST00000477626 RPL39P62891 51 aaKnown RBP8.51□□□□□ -1.05
PRPF39-203ENST00000477626 FAM74A4Q5TZK3 123 aa8.51□□□□□ -1.05
PRPF39-203ENST00000477626 TP73-AS1Q9UF72 201 aa8.51□□□□□ -1.05
PRPF39-203ENST00000477626 NOTCH3Q9UM47 2321 aa8.51□□□□□ -1.05
PRPF39-203ENST00000477626 ZNF56Q15929 161 aa8.5□□□□□ -1.05
PRPF39-203ENST00000477626 GTSF1LQ9H1H1 148 aa8.5□□□□□ -1.05
PRPF39-203ENST00000477626 PRO1933Q9H354 126 aa8.5□□□□□ -1.05
PRPF39-203ENST00000477626 IGHV3-73A0A0B4J1V6 119 aa8.5□□□□□ -1.05
PRPF39-203ENST00000477626 G3V4G9 280 aa8.5□□□□□ -1.05
PRPF39-203ENST00000477626 C2orf91Q6ZV80 131 aa8.5□□□□□ -1.05
PRPF39-203ENST00000477626 ATOH7Q8N100 152 aa8.5□□□□□ -1.05
PRPF39-203ENST00000477626 MIEN1Q9BRT3 115 aa8.5□□□□□ -1.05
PRPF39-203ENST00000477626 TP53TG1Q9Y2A0 90 aa8.5□□□□□ -1.05
PRPF39-203ENST00000477626 UBE2D4Q9Y2X8 147 aa8.5□□□□□ -1.05
PRPF39-203ENST00000477626 hDV102S1A0JD36 115 aa8.5□□□□□ -1.05
PRPF39-203ENST00000477626 K7EQD1 137 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 133.5 ms