RNA–Protein interactions for RNA: ENST00000477541.1

HLA-DMA-208, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 1,735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-208ENST00000477541 TMEM223A0PJW6 202 aa10.12□□□□□ -0.79
HLA-DMA-208ENST00000477541 SCGB1C2P0DMR2 95 aa10.12□□□□□ -0.79
HLA-DMA-208ENST00000477541 RHPN1-AS1Q9BWJ2 59 aa10.12□□□□□ -0.79
HLA-DMA-208ENST00000477541 EDA2RQ9HAV5 297 aa10.12□□□□□ -0.79
HLA-DMA-208ENST00000477541 ZNRF2Q8NHG8 242 aa10.11□□□□□ -0.79
HLA-DMA-208ENST00000477541 ABCA4P78363 2273 aa10.11□□□□□ -0.79
HLA-DMA-208ENST00000477541 MUC4Q99102 2169 aa10.1□□□□□ -0.79
HLA-DMA-208ENST00000477541 IGHV3-33P01772 117 aa10.1□□□□□ -0.79
HLA-DMA-208ENST00000477541 TSPEAR-AS2P59090 65 aa10.1□□□□□ -0.79
HLA-DMA-208ENST00000477541 SVIPQ8NHG7 77 aa10.1□□□□□ -0.79
HLA-DMA-208ENST00000477541 ERG28Q9UKR5 140 aa10.1□□□□□ -0.79
HLA-DMA-208ENST00000477541 F5H697 171 aa10.1□□□□□ -0.79
HLA-DMA-208ENST00000477541 SLC25A20O43772 301 aa10.1□□□□□ -0.79
HLA-DMA-208ENST00000477541 MT-ATP8P03928 68 aa10.1□□□□□ -0.79
HLA-DMA-208ENST00000477541 XGP55808 180 aa10.1□□□□□ -0.79
HLA-DMA-208ENST00000477541 RPL11P62913 178 aaKnown RBP10.1□□□□□ -0.79
HLA-DMA-208ENST00000477541 CDSNQ15517 529 aa10.1□□□□□ -0.79
HLA-DMA-208ENST00000477541 Q6ZS46 218 aa10.1□□□□□ -0.79
HLA-DMA-208ENST00000477541 ANKRD29Q8N6D5 301 aa10.1□□□□□ -0.79
HLA-DMA-208ENST00000477541 RNF152Q8N8N0 203 aa10.1□□□□□ -0.79
HLA-DMA-208ENST00000477541 TMEM263Q8WUH6 116 aaKnown RBP10.1□□□□□ -0.79
HLA-DMA-208ENST00000477541 FBN3Q75N90 2809 aa10.09□□□□□ -0.79
HLA-DMA-208ENST00000477541 PDZD2O15018 2839 aa10.09□□□□□ -0.79
HLA-DMA-208ENST00000477541 ATXN8Q156A1 80 aa10.09□□□□□ -0.79
HLA-DMA-208ENST00000477541 Q5PR19 223 aa10.09□□□□□ -0.79
HLA-DMA-208ENST00000477541 TMEM219Q86XT9 240 aa10.09□□□□□ -0.79
HLA-DMA-208ENST00000477541 BPESC1Q9GZL8 116 aa10.09□□□□□ -0.79
HLA-DMA-208ENST00000477541 SPANXA1Q9NS26 97 aa10.09□□□□□ -0.79
HLA-DMA-208ENST00000477541 ZNF256Q9Y2P7 627 aaPredicted RBP10.09□□□□□ -0.79
HLA-DMA-208ENST00000477541 IGHV3-16A0A0C4DH30 117 aa10.08□□□□□ -0.8
HLA-DMA-208ENST00000477541 M0QY20 66 aa10.08□□□□□ -0.8
HLA-DMA-208ENST00000477541 IGLV1-40P01703 118 aa10.08□□□□□ -0.8
HLA-DMA-208ENST00000477541 TRBV12-3P01733 135 aa10.08□□□□□ -0.8
HLA-DMA-208ENST00000477541 GNLYP22749 145 aa10.08□□□□□ -0.8
HLA-DMA-208ENST00000477541 RPL39P62891 51 aaKnown RBP10.08□□□□□ -0.8
HLA-DMA-208ENST00000477541 FHL3Q13643 280 aa10.08□□□□□ -0.8
HLA-DMA-208ENST00000477541 ZFAND6Q6FIF0 208 aa10.08□□□□□ -0.8
HLA-DMA-208ENST00000477541 C20orf203Q8NBC4 194 aa10.08□□□□□ -0.8
HLA-DMA-208ENST00000477541 RNF183Q96D59 192 aa10.08□□□□□ -0.8
HLA-DMA-208ENST00000477541 PYGO1Q9Y3Y4 419 aa10.08□□□□□ -0.8
HLA-DMA-208ENST00000477541 TRBV30A0A0K0K1B3 111 aa10.07□□□□□ -0.8
HLA-DMA-208ENST00000477541 A4D1N5 150 aa10.07□□□□□ -0.8
HLA-DMA-208ENST00000477541 F6UB75 175 aa10.07□□□□□ -0.8
HLA-DMA-208ENST00000477541 I3L3M4 83 aa10.07□□□□□ -0.8
HLA-DMA-208ENST00000477541 M0R2P5 195 aa10.07□□□□□ -0.8
HLA-DMA-208ENST00000477541 RHODO00212 210 aa10.07□□□□□ -0.8
HLA-DMA-208ENST00000477541 RPL13AP40429 203 aaKnown RBP10.07□□□□□ -0.8
HLA-DMA-208ENST00000477541 DCANP1Q8TF63 244 aa10.07□□□□□ -0.8
HLA-DMA-208ENST00000477541 ADGRG4Q8IZF6 3080 aa10.07□□□□□ -0.8
HLA-DMA-208ENST00000477541 CELSR1Q9NYQ6 3014 aa10.07□□□□□ -0.8
HLA-DMA-208ENST00000477541 APCP25054 2843 aa10.07□□□□□ -0.8
HLA-DMA-208ENST00000477541 TRAV26-1A0A087WT03 109 aa10.07□□□□□ -0.8
HLA-DMA-208ENST00000477541 A6NDX4 124 aa10.07□□□□□ -0.8
HLA-DMA-208ENST00000477541 ZNF22P17026 224 aaPredicted RBP10.07□□□□□ -0.8
HLA-DMA-208ENST00000477541 Q6Q795 121 aa10.07□□□□□ -0.8
HLA-DMA-208ENST00000477541 TEX29Q8N6K0 151 aa10.07□□□□□ -0.8
HLA-DMA-208ENST00000477541 PTH2Q96A98 100 aa10.07□□□□□ -0.8
HLA-DMA-208ENST00000477541 HIVEP1P15822 2718 aa10.06□□□□□ -0.8
HLA-DMA-208ENST00000477541 TMEM89A2RUT3 159 aa10.06□□□□□ -0.8
HLA-DMA-208ENST00000477541 SPRY2O43597 315 aa10.06□□□□□ -0.8
HLA-DMA-208ENST00000477541 SRD5A1P18405 259 aa10.06□□□□□ -0.8
HLA-DMA-208ENST00000477541 CITED1Q99966 193 aa10.06□□□□□ -0.8
HLA-DMA-208ENST00000477541 UBTD1Q9HAC8 227 aa10.06□□□□□ -0.8
HLA-DMA-208ENST00000477541 TRGV11A0A075B6L2 103 aa10.05□□□□□ -0.8
HLA-DMA-208ENST00000477541 A0A087WWL8 130 aa10.05□□□□□ -0.8
HLA-DMA-208ENST00000477541 PF4V1P10720 104 aa10.05□□□□□ -0.8
HLA-DMA-208ENST00000477541 EMP1P54849 157 aa10.05□□□□□ -0.8
HLA-DMA-208ENST00000477541 ZNF56Q15929 161 aa10.05□□□□□ -0.8
HLA-DMA-208ENST00000477541 IGHV1OR15-1A0A075B7D0 117 aa10.04□□□□□ -0.8
HLA-DMA-208ENST00000477541 C9JAW5 83 aa10.04□□□□□ -0.8
HLA-DMA-208ENST00000477541 SNRPD3P62318 126 aaKnown RBP10.04□□□□□ -0.8
HLA-DMA-208ENST00000477541 CFHR3Q02985 330 aa10.04□□□□□ -0.8
HLA-DMA-208ENST00000477541 MRPL23Q16540 153 aaKnown RBP10.04□□□□□ -0.8
HLA-DMA-208ENST00000477541 SPANXDQ9BXN6 97 aa10.04□□□□□ -0.8
HLA-DMA-208ENST00000477541 SPANXCQ9NY87 97 aa10.04□□□□□ -0.8
HLA-DMA-208ENST00000477541 HIVEP3Q5T1R4 2406 aa10.04□□□□□ -0.8
HLA-DMA-208ENST00000477541 TRBV10-2A0A0K0K1G8 114 aa10.04□□□□□ -0.8
HLA-DMA-208ENST00000477541 A0A1W2PPR1 153 aa10.04□□□□□ -0.8
HLA-DMA-208ENST00000477541 LINC01620Q4KN68 170 aa10.04□□□□□ -0.8
HLA-DMA-208ENST00000477541 PIK3CD-AS1Q5SR53 167 aa10.04□□□□□ -0.8
HLA-DMA-208ENST00000477541 SFTA2Q6UW10 78 aa10.04□□□□□ -0.8
HLA-DMA-208ENST00000477541 JPT2Q9H910 190 aa10.04□□□□□ -0.8
HLA-DMA-208ENST00000477541 LINC00527Q9UJ94 153 aa10.04□□□□□ -0.8
HLA-DMA-208ENST00000477541 AKAP9Q99996 3911 aa10.04□□□□□ -0.8
HLA-DMA-208ENST00000477541 IGLV4-3A0A075B6K6 122 aa10.03□□□□□ -0.8
HLA-DMA-208ENST00000477541 TRAV12-3A0A0B4J271 114 aa10.03□□□□□ -0.8
HLA-DMA-208ENST00000477541 DEFB1P60022 68 aa10.03□□□□□ -0.8
HLA-DMA-208ENST00000477541 MUSTN1Q8IVN3 82 aa10.03□□□□□ -0.8
HLA-DMA-208ENST00000477541 MTORP42345 2549 aa10.03□□□□□ -0.8
HLA-DMA-208ENST00000477541 TRAV2A0A0B4J234 112 aa10.02□□□□□ -0.8
HLA-DMA-208ENST00000477541 A0A0J9YXY3 114 aa10.02□□□□□ -0.8
HLA-DMA-208ENST00000477541 H3BT86 120 aa10.02□□□□□ -0.8
HLA-DMA-208ENST00000477541 IGHV3-11P01762 117 aa10.02□□□□□ -0.8
HLA-DMA-208ENST00000477541 MRPS36P82909 103 aaKnown RBP10.02□□□□□ -0.8
HLA-DMA-208ENST00000477541 ANAPC13Q9BS18 74 aa10.02□□□□□ -0.8
HLA-DMA-208ENST00000477541 YAE1D1Q9NRH1 226 aa10.02□□□□□ -0.8
HLA-DMA-208ENST00000477541 TIMM17BO60830 172 aa10.02□□□□□ -0.81
HLA-DMA-208ENST00000477541 SNCGO76070 127 aa10.02□□□□□ -0.81
HLA-DMA-208ENST00000477541 COX6CP09669 75 aa10.02□□□□□ -0.81
HLA-DMA-208ENST00000477541 FAM74A4Q5TZK3 123 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms