RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 REG3AQ06141 175 aa4.25□□□□□ -1.73
RTFDC1-206ENST00000477485 TMEM97Q5BJF2 176 aa4.25□□□□□ -1.73
RTFDC1-206ENST00000477485 SPANXN1Q5VSR9 72 aa4.25□□□□□ -1.73
RTFDC1-206ENST00000477485 CLRN3Q8NCR9 226 aa4.25□□□□□ -1.73
RTFDC1-206ENST00000477485 OR10AG1Q8NH19 301 aa4.25□□□□□ -1.73
RTFDC1-206ENST00000477485 LYPD6BQ8NI32 183 aa4.25□□□□□ -1.73
RTFDC1-206ENST00000477485 SUN5Q8TC36 379 aa4.25□□□□□ -1.73
RTFDC1-206ENST00000477485 S100ZQ8WXG8 99 aa4.25□□□□□ -1.73
RTFDC1-206ENST00000477485 FMC1Q96HJ9 113 aa4.25□□□□□ -1.73
RTFDC1-206ENST00000477485 PSMG3Q9BT73 122 aaPredicted RBP4.25□□□□□ -1.73
RTFDC1-206ENST00000477485 ZNF471Q9BX82 626 aaPredicted RBP4.25□□□□□ -1.73
RTFDC1-206ENST00000477485 TMA7Q9Y2S6 64 aaKnown RBP4.25□□□□□ -1.73
RTFDC1-206ENST00000477485 KIF25-AS1Q9Y6Z4 181 aa4.25□□□□□ -1.73
RTFDC1-206ENST00000477485 FAT3Q8TDW7 4589 aa4.25□□□□□ -1.73
RTFDC1-206ENST00000477485 IGKV3OR2-268A0A0C4DH90 116 aa4.24□□□□□ -1.73
RTFDC1-206ENST00000477485 UPK1BO75841 260 aa4.24□□□□□ -1.73
RTFDC1-206ENST00000477485 AKR1C3P42330 323 aa4.24□□□□□ -1.73
RTFDC1-206ENST00000477485 SERF2P84101 59 aa4.24□□□□□ -1.73
RTFDC1-206ENST00000477485 MAJINQ3KP22 176 aa4.24□□□□□ -1.73
RTFDC1-206ENST00000477485 DNLZQ5SXM8 178 aa4.24□□□□□ -1.73
RTFDC1-206ENST00000477485 CST9LP1Q5W188 147 aa4.24□□□□□ -1.73
RTFDC1-206ENST00000477485 WDR73Q6P4I2 378 aa4.24□□□□□ -1.73
RTFDC1-206ENST00000477485 OR10G8Q8NGN5 311 aa4.24□□□□□ -1.73
RTFDC1-206ENST00000477485 STOML3Q8TAV4 291 aa4.24□□□□□ -1.73
RTFDC1-206ENST00000477485 SPACA4Q8TDM5 124 aa4.24□□□□□ -1.73
RTFDC1-206ENST00000477485 HIST1H2BAQ96A08 127 aa4.24□□□□□ -1.73
RTFDC1-206ENST00000477485 TNFSF18Q9UNG2 199 aa4.24□□□□□ -1.73
RTFDC1-206ENST00000477485 ZFP30Q9Y2G7 519 aa4.24□□□□□ -1.73
RTFDC1-206ENST00000477485 PKHD1L1Q86WI1 4243 aa4.24□□□□□ -1.73
RTFDC1-206ENST00000477485 IGHV1-24A0A0C4DH33 117 aa4.23□□□□□ -1.73
RTFDC1-206ENST00000477485 TRBV6-1A0A0K0K1D8 114 aa4.23□□□□□ -1.73
RTFDC1-206ENST00000477485 CTXND1A0A1B0GTU2 59 aa4.23□□□□□ -1.73
RTFDC1-206ENST00000477485 FAM74A7A6NL05 159 aa4.23□□□□□ -1.73
RTFDC1-206ENST00000477485 UBE2L6O14933 153 aa4.23□□□□□ -1.73
RTFDC1-206ENST00000477485 SULT1A2P50226 295 aa4.23□□□□□ -1.73
RTFDC1-206ENST00000477485 CNBPP62633 177 aaKnown RBP4.23□□□□□ -1.73
RTFDC1-206ENST00000477485 ZNF674Q2M3X9 581 aa4.23□□□□□ -1.73
RTFDC1-206ENST00000477485 ANKRD39Q53RE8 183 aa4.23□□□□□ -1.73
RTFDC1-206ENST00000477485 PRR27Q6MZM9 219 aa4.23□□□□□ -1.73
RTFDC1-206ENST00000477485 NTM-AS1Q6ZSK4 140 aa4.23□□□□□ -1.73
RTFDC1-206ENST00000477485 RNF185Q96GF1 192 aa4.23□□□□□ -1.73
RTFDC1-206ENST00000477485 TPPP3Q9BW30 176 aa4.23□□□□□ -1.73
RTFDC1-206ENST00000477485 NKX6-2Q9C056 277 aaPredicted RBP4.23□□□□□ -1.73
RTFDC1-206ENST00000477485 PRR34Q9NV39 138 aa4.23□□□□□ -1.73
RTFDC1-206ENST00000477485 BORCS7-ASMTA0A0B4J1R7 106 aa4.22□□□□□ -1.73
RTFDC1-206ENST00000477485 MAP1LC3B2A6NCE7 125 aa4.22□□□□□ -1.73
RTFDC1-206ENST00000477485 GAS8-AS1O95177 125 aa4.22□□□□□ -1.73
RTFDC1-206ENST00000477485 DEFA1P59665 94 aa4.22□□□□□ -1.73
RTFDC1-206ENST00000477485 PRR3P79522 188 aaKnown RBP4.22□□□□□ -1.73
RTFDC1-206ENST00000477485 COX6A2Q02221 97 aa4.22□□□□□ -1.73
RTFDC1-206ENST00000477485 CIRBPQ14011 172 aaKnown RBP4.22□□□□□ -1.73
RTFDC1-206ENST00000477485 ZNF726P1Q15940 193 aa4.22□□□□□ -1.73
RTFDC1-206ENST00000477485 HIGD2BQ4VC39 106 aa4.22□□□□□ -1.73
RTFDC1-206ENST00000477485 AKR1C8PQ5T2L2 129 aa4.22□□□□□ -1.73
RTFDC1-206ENST00000477485 KRTAP26-1Q6PEX3 210 aa4.22□□□□□ -1.73
RTFDC1-206ENST00000477485 REG3GQ6UW15 175 aa4.22□□□□□ -1.73
RTFDC1-206ENST00000477485 STPG4Q8N801 248 aa4.22□□□□□ -1.73
RTFDC1-206ENST00000477485 INO80EQ8NBZ0 244 aaPredicted RBP4.22□□□□□ -1.73
RTFDC1-206ENST00000477485 LINC01600Q96MT4 127 aa4.22□□□□□ -1.73
RTFDC1-206ENST00000477485 AP1S3Q96PC3 154 aa4.22□□□□□ -1.73
RTFDC1-206ENST00000477485 MARVELD1Q9BSK0 173 aa4.22□□□□□ -1.73
RTFDC1-206ENST00000477485 MAP1LC3BQ9GZQ8 125 aa4.22□□□□□ -1.73
RTFDC1-206ENST00000477485 NDUFA13Q9P0J0 144 aa4.22□□□□□ -1.73
RTFDC1-206ENST00000477485 TRAV8-4A0A0B4J246 113 aa4.21□□□□□ -1.74
RTFDC1-206ENST00000477485 A0A1B0GV50 99 aa4.21□□□□□ -1.74
RTFDC1-206ENST00000477485 GAGE12HA6NDE8 117 aa4.21□□□□□ -1.74
RTFDC1-206ENST00000477485 LTAP01374 205 aa4.21□□□□□ -1.74
RTFDC1-206ENST00000477485 P01737 135 aa4.21□□□□□ -1.74
RTFDC1-206ENST00000477485 NKX2-5P52952 324 aaPredicted RBP4.21□□□□□ -1.74
RTFDC1-206ENST00000477485 IFITM3Q01628 133 aa4.21□□□□□ -1.74
RTFDC1-206ENST00000477485 RPL7L1Q6DKI1 246 aaKnown RBP4.21□□□□□ -1.74
RTFDC1-206ENST00000477485 AQP10Q96PS8 301 aa4.21□□□□□ -1.74
RTFDC1-206ENST00000477485 TMEM243Q9BU79 118 aa4.21□□□□□ -1.74
RTFDC1-206ENST00000477485 PLAC8Q9NZF1 115 aa4.21□□□□□ -1.74
RTFDC1-206ENST00000477485 VAX2Q9UIW0 290 aa4.21□□□□□ -1.74
RTFDC1-206ENST00000477485 ALG5Q9Y673 324 aa4.21□□□□□ -1.74
RTFDC1-206ENST00000477485 IGLV4-60A0A075B6I1 120 aa4.2□□□□□ -1.74
RTFDC1-206ENST00000477485 FXYD6-FXYD2A0A087WZ82 144 aa4.2□□□□□ -1.74
RTFDC1-206ENST00000477485 A0A0J9YXV3 536 aa4.2□□□□□ -1.74
RTFDC1-206ENST00000477485 H7C1H1 209 aa4.2□□□□□ -1.74
RTFDC1-206ENST00000477485 NDUFS6O75380 124 aaKnown RBP4.2□□□□□ -1.74
RTFDC1-206ENST00000477485 SLPIP03973 132 aa4.2□□□□□ -1.74
RTFDC1-206ENST00000477485 H2AFB1P0C5Y9 115 aa4.2□□□□□ -1.74
RTFDC1-206ENST00000477485 RPS10P46783 165 aaKnown RBP4.2□□□□□ -1.74
RTFDC1-206ENST00000477485 AMTP48728 403 aa4.2□□□□□ -1.74
RTFDC1-206ENST00000477485 IQCJQ1A5X6 159 aa4.2□□□□□ -1.74
RTFDC1-206ENST00000477485 CFAP161Q6P656 301 aa4.2□□□□□ -1.74
RTFDC1-206ENST00000477485 C20orf203Q8NBC4 194 aa4.2□□□□□ -1.74
RTFDC1-206ENST00000477485 PRSS3P2Q8NHM4 247 aa4.2□□□□□ -1.74
RTFDC1-206ENST00000477485 GFRA4Q9GZZ7 299 aa4.2□□□□□ -1.74
RTFDC1-206ENST00000477485 MED28Q9H204 178 aa4.2□□□□□ -1.74
RTFDC1-206ENST00000477485 SNAI2O43623 268 aa4.19□□□□□ -1.74
RTFDC1-206ENST00000477485 PAGE4O60829 102 aa4.19□□□□□ -1.74
RTFDC1-206ENST00000477485 PFDN1O60925 122 aa4.19□□□□□ -1.74
RTFDC1-206ENST00000477485 GZMBP10144 247 aa4.19□□□□□ -1.74
RTFDC1-206ENST00000477485 AMMECR1LQ6DCA0 310 aa4.19□□□□□ -1.74
RTFDC1-206ENST00000477485 SUMO4Q6EEV6 95 aa4.19□□□□□ -1.74
RTFDC1-206ENST00000477485 COX8CQ7Z4L0 72 aa4.19□□□□□ -1.74
RTFDC1-206ENST00000477485 C15orf56Q8N910 161 aa4.19□□□□□ -1.74
RTFDC1-206ENST00000477485 A0A096LNI7 61 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms