RNA–Protein interactions for RNA: ENST00000477141.1

RPL39P34-201, Transcript of ribosomal protein L39 pseudogene 34, humanhuman

BASIC

Gene RPL39P34, Length 156 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P34-201ENST00000477141 PPP1R2P41236 205 aa-0.67□□□□□ -2.52
RPL39P34-201ENST00000477141 PCBD1P61457 104 aa-0.67□□□□□ -2.52
RPL39P34-201ENST00000477141 RPL19P84098 196 aaKnown RBP-0.67□□□□□ -2.52
RPL39P34-201ENST00000477141 AKR1C8PQ5T2L2 129 aa-0.67□□□□□ -2.52
RPL39P34-201ENST00000477141 TMEM91Q6ZNR0 172 aa-0.67□□□□□ -2.52
RPL39P34-201ENST00000477141 CCDC42Q96M95 316 aa-0.67□□□□□ -2.52
RPL39P34-201ENST00000477141 PAIP2Q9BPZ3 127 aaKnown RBP-0.67□□□□□ -2.52
RPL39P34-201ENST00000477141 SLC35B3Q9H1N7 401 aa-0.67□□□□□ -2.52
RPL39P34-201ENST00000477141 SH3BGRL3Q9H299 93 aa-0.67□□□□□ -2.52
RPL39P34-201ENST00000477141 OTORQ9NRC9 128 aa-0.67□□□□□ -2.52
RPL39P34-201ENST00000477141 LYRM2Q9NU23 88 aaPredicted RBP-0.67□□□□□ -2.52
RPL39P34-201ENST00000477141 METTL1Q9UBP6 276 aaKnown RBP-0.67□□□□□ -2.52
RPL39P34-201ENST00000477141 SSR3Q9UNL2 185 aa-0.67□□□□□ -2.52
RPL39P34-201ENST00000477141 SBF2Q86WG5 1849 aa-0.67□□□□□ -2.52
RPL39P34-201ENST00000477141 TECPR2O15040 1411 aa-0.67□□□□□ -2.52
RPL39P34-201ENST00000477141 KDM5CP41229 1560 aa-0.67□□□□□ -2.52
RPL39P34-201ENST00000477141 PRDM2Q13029 1718 aa-0.67□□□□□ -2.52
RPL39P34-201ENST00000477141 UHRF1BP1LA0JNW5 1464 aa-0.67□□□□□ -2.52
RPL39P34-201ENST00000477141 PXDNQ92626 1479 aa-0.67□□□□□ -2.52
RPL39P34-201ENST00000477141 CAMSAP1Q5T5Y3 1602 aa-0.67□□□□□ -2.52
RPL39P34-201ENST00000477141 PAPPA2Q9BXP8 1791 aa-0.68□□□□□ -2.52
RPL39P34-201ENST00000477141 MED23Q9ULK4 1368 aa-0.68□□□□□ -2.52
RPL39P34-201ENST00000477141 TULP4Q9NRJ4 1543 aa-0.68□□□□□ -2.52
RPL39P34-201ENST00000477141 TRAV13-1A0A0B4J241 112 aa-0.68□□□□□ -2.52
RPL39P34-201ENST00000477141 TRBV7-6A0A0J9YX20 115 aa-0.68□□□□□ -2.52
RPL39P34-201ENST00000477141 PPP5D1E7EU14 171 aa-0.68□□□□□ -2.52
RPL39P34-201ENST00000477141 H3BNG1 76 aa-0.68□□□□□ -2.52
RPL39P34-201ENST00000477141 GABARAPH6UMI1 98 aa-0.68□□□□□ -2.52
RPL39P34-201ENST00000477141 UQCRQO14949 82 aa-0.68□□□□□ -2.52
RPL39P34-201ENST00000477141 ATG12O94817 140 aa-0.68□□□□□ -2.52
RPL39P34-201ENST00000477141 PCF11O94913 1555 aaKnown RBP-0.68□□□□□ -2.52
RPL39P34-201ENST00000477141 RPP14O95059 124 aaKnown RBP-0.68□□□□□ -2.52
RPL39P34-201ENST00000477141 HBDP02042 147 aa-0.68□□□□□ -2.52
RPL39P34-201ENST00000477141 PIPP12273 146 aaPredicted RBP-0.68□□□□□ -2.52
RPL39P34-201ENST00000477141 HIST1H1BP16401 226 aaKnown RBP-0.68□□□□□ -2.52
RPL39P34-201ENST00000477141 UBE2D1P51668 147 aa-0.68□□□□□ -2.52
RPL39P34-201ENST00000477141 CEBPGP53567 150 aa-0.68□□□□□ -2.52
RPL39P34-201ENST00000477141 CCL18P55774 89 aa-0.68□□□□□ -2.52
RPL39P34-201ENST00000477141 GNG5P63218 68 aa-0.68□□□□□ -2.52
RPL39P34-201ENST00000477141 BASP1P80723 227 aaKnown RBP-0.68□□□□□ -2.52
RPL39P34-201ENST00000477141 COX17Q14061 63 aa-0.68□□□□□ -2.52
RPL39P34-201ENST00000477141 TMED2Q15363 201 aa-0.68□□□□□ -2.52
RPL39P34-201ENST00000477141 SPA17Q15506 151 aa-0.68□□□□□ -2.52
RPL39P34-201ENST00000477141 Q6JHZ5 121 aa-0.68□□□□□ -2.52
RPL39P34-201ENST00000477141 LINC00305Q7Z4B0 112 aa-0.68□□□□□ -2.52
RPL39P34-201ENST00000477141 USMG5Q96IX5 58 aa-0.68□□□□□ -2.52
RPL39P34-201ENST00000477141 PHB2Q99623 299 aa-0.68□□□□□ -2.52
RPL39P34-201ENST00000477141 ARMC1Q9NVT9 282 aa-0.68□□□□□ -2.52
RPL39P34-201ENST00000477141 PRNDQ9UKY0 176 aa-0.68□□□□□ -2.52
RPL39P34-201ENST00000477141 ANKRD50Q9ULJ7 1429 aa-0.68□□□□□ -2.52
RPL39P34-201ENST00000477141 NOP16Q9Y3C1 178 aaKnown RBP-0.68□□□□□ -2.52
RPL39P34-201ENST00000477141 POLA1P09884 1462 aaPredicted RBP-0.68□□□□□ -2.52
RPL39P34-201ENST00000477141 KIF21AQ7Z4S6 1674 aa-0.69□□□□□ -2.52
RPL39P34-201ENST00000477141 ARHGEF12Q9NZN5 1544 aa-0.69□□□□□ -2.52
RPL39P34-201ENST00000477141 FMN2Q9NZ56 1722 aa-0.69□□□□□ -2.52
RPL39P34-201ENST00000477141 SETBP1Q9Y6X0 1596 aa-0.69□□□□□ -2.52
RPL39P34-201ENST00000477141 MUC22E2RYF6 1773 aaPredicted RBP-0.69□□□□□ -2.52
RPL39P34-201ENST00000477141 BORCS7-ASMTA0A0B4J1R7 106 aa-0.69□□□□□ -2.52
RPL39P34-201ENST00000477141 TRBV7-4A0A0J9YYF1 115 aa-0.69□□□□□ -2.52
RPL39P34-201ENST00000477141 CTXND1A0A1B0GTU2 59 aa-0.69□□□□□ -2.52
RPL39P34-201ENST00000477141 C9orf92A6NGG3 77 aa-0.69□□□□□ -2.52
RPL39P34-201ENST00000477141 H3BMG7 143 aa-0.69□□□□□ -2.52
RPL39P34-201ENST00000477141 J3QLW9 94 aa-0.69□□□□□ -2.52
RPL39P34-201ENST00000477141 YPEL1O60688 119 aa-0.69□□□□□ -2.52
RPL39P34-201ENST00000477141 IFNA17P01571 189 aa-0.69□□□□□ -2.52
RPL39P34-201ENST00000477141 CSN2P05814 226 aa-0.69□□□□□ -2.52
RPL39P34-201ENST00000477141 CST2P09228 141 aa-0.69□□□□□ -2.52
RPL39P34-201ENST00000477141 PTMSP20962 102 aa-0.69□□□□□ -2.52
RPL39P34-201ENST00000477141 H1FX-AS1Q4G0G2 97 aa-0.69□□□□□ -2.52
RPL39P34-201ENST00000477141 TMEM170BQ5T4T1 132 aa-0.69□□□□□ -2.52
RPL39P34-201ENST00000477141 SNX29P2Q8IUI4 249 aa-0.69□□□□□ -2.52
RPL39P34-201ENST00000477141 STX19Q8N4C7 294 aa-0.69□□□□□ -2.52
RPL39P34-201ENST00000477141 ATP6V0E2Q8NHE4 81 aa-0.69□□□□□ -2.52
RPL39P34-201ENST00000477141 C9orf16Q9BUW7 83 aa-0.69□□□□□ -2.52
RPL39P34-201ENST00000477141 NAA60Q9H7X0 242 aa-0.69□□□□□ -2.52
RPL39P34-201ENST00000477141 APLNQ9ULZ1 77 aa-0.69□□□□□ -2.52
RPL39P34-201ENST00000477141 LAMTOR2Q9Y2Q5 125 aa-0.69□□□□□ -2.52
RPL39P34-201ENST00000477141 R4GMQ9 66 aa-0.69□□□□□ -2.52
RPL39P34-201ENST00000477141 RNF213Q63HN8 5207 aa-0.69□□□□□ -2.52
RPL39P34-201ENST00000477141 FAT3Q8TDW7 4589 aa-0.69□□□□□ -2.52
RPL39P34-201ENST00000477141 A2MP01023 1474 aa-0.69□□□□□ -2.52
RPL39P34-201ENST00000477141 HMGXB3Q12766 1538 aa-0.69□□□□□ -2.52
RPL39P34-201ENST00000477141 NWD2Q9ULI1 1742 aa-0.69□□□□□ -2.52
RPL39P34-201ENST00000477141 HTTP42858 3142 aa-0.7□□□□□ -2.52
RPL39P34-201ENST00000477141 NBASA2RRP1 2371 aa-0.7□□□□□ -2.52
RPL39P34-201ENST00000477141 ZNF236Q9UL36 1845 aa-0.7□□□□□ -2.52
RPL39P34-201ENST00000477141 CLPSL1A2RUU4 121 aa-0.7□□□□□ -2.52
RPL39P34-201ENST00000477141 K7EP34 96 aa-0.7□□□□□ -2.52
RPL39P34-201ENST00000477141 SSSCA1O60232 199 aa-0.7□□□□□ -2.52
RPL39P34-201ENST00000477141 RBP4P02753 201 aa-0.7□□□□□ -2.52
RPL39P34-201ENST00000477141 RPS17P08708 135 aaKnown RBP-0.7□□□□□ -2.52
RPL39P34-201ENST00000477141 HSD11B1P28845 292 aa-0.7□□□□□ -2.52
RPL39P34-201ENST00000477141 S100A11P31949 105 aa-0.7□□□□□ -2.52
RPL39P34-201ENST00000477141 S100A5P33763 92 aa-0.7□□□□□ -2.52
RPL39P34-201ENST00000477141 RPL22P35268 128 aaKnown RBP-0.7□□□□□ -2.52
RPL39P34-201ENST00000477141 LSM6P62312 80 aaKnown RBP-0.7□□□□□ -2.52
RPL39P34-201ENST00000477141 PSPHP78330 225 aa-0.7□□□□□ -2.52
RPL39P34-201ENST00000477141 COTL1Q14019 142 aa-0.7□□□□□ -2.52
RPL39P34-201ENST00000477141 ALX1Q15699 326 aa-0.7□□□□□ -2.52
RPL39P34-201ENST00000477141 LTC4SQ16873 150 aa-0.7□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms