RNA–Protein interactions for RNA: ENST00000476932.5

LIMS2-214, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-214ENST00000476932 RHOHQ15669 191 aa15.48■□□□□ 0.07
LIMS2-214ENST00000476932 NACAE9PAV3 2078 aa15.48■□□□□ 0.07
LIMS2-214ENST00000476932 KNCNA6PVL3 124 aa15.48■□□□□ 0.07
LIMS2-214ENST00000476932 TEX15Q9BXT5 2789 aa15.48■□□□□ 0.07
LIMS2-214ENST00000476932 TRGV11A0A075B6L2 103 aa15.47■□□□□ 0.07
LIMS2-214ENST00000476932 SCGB2A2Q13296 93 aa15.47■□□□□ 0.07
LIMS2-214ENST00000476932 A8MTW9 85 aa15.47■□□□□ 0.07
LIMS2-214ENST00000476932 HERVK_113P61574 105 aa15.47■□□□□ 0.07
LIMS2-214ENST00000476932 SCGB1D4Q6XE38 83 aa15.47■□□□□ 0.07
LIMS2-214ENST00000476932 OPRPNQ99935 248 aaPredicted RBP15.47■□□□□ 0.07
LIMS2-214ENST00000476932 ZNF843Q8N446 348 aa15.46■□□□□ 0.07
LIMS2-214ENST00000476932 ABCA12Q86UK0 2595 aa15.46■□□□□ 0.07
LIMS2-214ENST00000476932 RBMY1BA6NDE4 496 aaKnown RBP15.46■□□□□ 0.06
LIMS2-214ENST00000476932 RBMY1EA6NEQ0 496 aaKnown RBP15.46■□□□□ 0.06
LIMS2-214ENST00000476932 RBMY1DP0C7P1 496 aaKnown RBP15.46■□□□□ 0.06
LIMS2-214ENST00000476932 A0A0J9YY99 117 aa15.45■□□□□ 0.06
LIMS2-214ENST00000476932 Q8N2B8 174 aa15.45■□□□□ 0.06
LIMS2-214ENST00000476932 AMELXQ99217 191 aa15.45■□□□□ 0.06
LIMS2-214ENST00000476932 UBE2D1P51668 147 aa15.45■□□□□ 0.06
LIMS2-214ENST00000476932 DEFB131AP59861 70 aa15.45■□□□□ 0.06
LIMS2-214ENST00000476932 TMEM170BQ5T4T1 132 aa15.44■□□□□ 0.06
LIMS2-214ENST00000476932 NFE4Q86UQ8 179 aa15.44■□□□□ 0.06
LIMS2-214ENST00000476932 C20orf203Q8NBC4 194 aa15.44■□□□□ 0.06
LIMS2-214ENST00000476932 NAV2Q8IVL1 2488 aa15.43■□□□□ 0.06
LIMS2-214ENST00000476932 I3L3M4 83 aa15.43■□□□□ 0.06
LIMS2-214ENST00000476932 TEX48A0A1B0GUV7 120 aa15.42■□□□□ 0.06
LIMS2-214ENST00000476932 H3BMG7 143 aa15.42■□□□□ 0.06
LIMS2-214ENST00000476932 H3BMM0 161 aa15.42■□□□□ 0.06
LIMS2-214ENST00000476932 EDA2RQ9HAV5 297 aa15.42■□□□□ 0.06
LIMS2-214ENST00000476932 MYO9AB2RTY4 2548 aa15.42■□□□□ 0.06
LIMS2-214ENST00000476932 SRSF9Q13242 221 aaKnown RBP eCLIP15.41■□□□□ 0.06
LIMS2-214ENST00000476932 AKAP9Q99996 3911 aa15.41■□□□□ 0.06
LIMS2-214ENST00000476932 PRM2P04554 102 aa15.41■□□□□ 0.06
LIMS2-214ENST00000476932 WFDC2Q14508 124 aa15.41■□□□□ 0.06
LIMS2-214ENST00000476932 Q5PR19 223 aa15.41■□□□□ 0.06
LIMS2-214ENST00000476932 TMEM61Q8N0U2 210 aa15.41■□□□□ 0.06
LIMS2-214ENST00000476932 DUX3Q96PT4 197 aa15.41■□□□□ 0.06
LIMS2-214ENST00000476932 PGPEP1Q9NXJ5 209 aa15.41■□□□□ 0.06
LIMS2-214ENST00000476932 TMEM238LA0A1B0GVL6 79 aa15.4■□□□□ 0.06
LIMS2-214ENST00000476932 A6NJY4 79 aa15.4■□□□□ 0.06
LIMS2-214ENST00000476932 F8W1H4 67 aa15.4■□□□□ 0.06
LIMS2-214ENST00000476932 PRO0461Q9UI25 63 aa15.4■□□□□ 0.06
LIMS2-214ENST00000476932 PROK1P58294 105 aa15.4■□□□□ 0.06
LIMS2-214ENST00000476932 SPAG8Q99932 426 aaPredicted RBP15.4■□□□□ 0.06
LIMS2-214ENST00000476932 SPANXB1Q9NS25 103 aaPredicted RBP15.4■□□□□ 0.06
LIMS2-214ENST00000476932 EPG5Q9HCE0 2579 aa15.39■□□□□ 0.05
LIMS2-214ENST00000476932 IGLV4-3A0A075B6K6 122 aa15.39■□□□□ 0.05
LIMS2-214ENST00000476932 HTN1P15515 57 aa15.39■□□□□ 0.05
LIMS2-214ENST00000476932 RPL24P83731 157 aaKnown RBP15.39■□□□□ 0.05
LIMS2-214ENST00000476932 DEFB113Q30KQ7 82 aa15.39■□□□□ 0.05
LIMS2-214ENST00000476932 IGHV3-73A0A0B4J1V6 119 aa15.38■□□□□ 0.05
LIMS2-214ENST00000476932 TRAV2A0A0B4J234 112 aa15.38■□□□□ 0.05
LIMS2-214ENST00000476932 J3QQQ9 107 aa15.38■□□□□ 0.05
LIMS2-214ENST00000476932 FAM104AQ969W3 186 aa15.38■□□□□ 0.05
LIMS2-214ENST00000476932 ZNF469Q96JG9 3925 aaPredicted RBP15.38■□□□□ 0.05
LIMS2-214ENST00000476932 TMEM223A0PJW6 202 aa15.38■□□□□ 0.05
LIMS2-214ENST00000476932 SLC25A29Q8N8R3 303 aa15.38■□□□□ 0.05
LIMS2-214ENST00000476932 C4orf3Q8WVX3 66 aa15.38■□□□□ 0.05
LIMS2-214ENST00000476932 IGHV3-30P01768 117 aa15.37■□□□□ 0.05
LIMS2-214ENST00000476932 IGHV3-30-5P0DP03 117 aa15.37■□□□□ 0.05
LIMS2-214ENST00000476932 ZNF22P17026 224 aaPredicted RBP15.37■□□□□ 0.05
LIMS2-214ENST00000476932 MRPL16Q9NX20 251 aaKnown RBP15.37■□□□□ 0.05
LIMS2-214ENST00000476932 TSPAN13O95857 204 aa15.36■□□□□ 0.05
LIMS2-214ENST00000476932 HIST2H2BDQ6DRA6 164 aa15.36■□□□□ 0.05
LIMS2-214ENST00000476932 MAP6D1Q9H9H5 199 aa15.36■□□□□ 0.05
LIMS2-214ENST00000476932 KRTAP1-3Q8IUG1 177 aa15.36■□□□□ 0.05
LIMS2-214ENST00000476932 DLX4Q92988 240 aaPredicted RBP15.36■□□□□ 0.05
LIMS2-214ENST00000476932 MTURNQ8N3F0 131 aa15.35■□□□□ 0.05
LIMS2-214ENST00000476932 PEMTQ9UBM1 199 aa15.35■□□□□ 0.05
LIMS2-214ENST00000476932 Q9UF83 564 aa15.35■□□□□ 0.05
LIMS2-214ENST00000476932 RHODO00212 210 aa15.34■□□□□ 0.05
LIMS2-214ENST00000476932 LRRC75A-AS1Q8N1F1 130 aa15.34■□□□□ 0.05
LIMS2-214ENST00000476932 Q96MF0 132 aa15.34■□□□□ 0.05
LIMS2-214ENST00000476932 A0A0J9YXV3 536 aa15.34■□□□□ 0.05
LIMS2-214ENST00000476932 M0R2P5 195 aa15.34■□□□□ 0.05
LIMS2-214ENST00000476932 LEPROTO15243 131 aa15.34■□□□□ 0.05
LIMS2-214ENST00000476932 LGALS3P17931 250 aaKnown RBP15.34■□□□□ 0.05
LIMS2-214ENST00000476932 Q6ZSN1 163 aa15.34■□□□□ 0.05
LIMS2-214ENST00000476932 NDUFA11Q86Y39 141 aa15.34■□□□□ 0.05
LIMS2-214ENST00000476932 GAGE13Q4V321 117 aa15.33■□□□□ 0.05
LIMS2-214ENST00000476932 TLN2Q9Y4G6 2542 aa15.33■□□□□ 0.05
LIMS2-214ENST00000476932 A8MWV9 139 aa15.33■□□□□ 0.04
LIMS2-214ENST00000476932 APOMO95445 188 aa15.33■□□□□ 0.04
LIMS2-214ENST00000476932 PYGO1Q9Y3Y4 419 aa15.33■□□□□ 0.04
LIMS2-214ENST00000476932 APCP25054 2843 aa15.33■□□□□ 0.04
LIMS2-214ENST00000476932 PIK3CD-AS1Q5SR53 167 aa15.32■□□□□ 0.04
LIMS2-214ENST00000476932 SH2D6Q7Z4S9 175 aa15.32■□□□□ 0.04
LIMS2-214ENST00000476932 C11orf72Q8NBR9 251 aa15.32■□□□□ 0.04
LIMS2-214ENST00000476932 VCX2Q9H322 139 aa15.32■□□□□ 0.04
LIMS2-214ENST00000476932 CD28P10747 220 aa15.32■□□□□ 0.04
LIMS2-214ENST00000476932 UBE2D3P61077 147 aa15.32■□□□□ 0.04
LIMS2-214ENST00000476932 UBE2D2P62837 147 aa15.32■□□□□ 0.04
LIMS2-214ENST00000476932 ZNF415Q09FC8 603 aa15.32■□□□□ 0.04
LIMS2-214ENST00000476932 COTL1Q14019 142 aa15.32■□□□□ 0.04
LIMS2-214ENST00000476932 KHDC1LQ5JSQ8 128 aa15.32■□□□□ 0.04
LIMS2-214ENST00000476932 CFC1BP0CG36 223 aa15.31■□□□□ 0.04
LIMS2-214ENST00000476932 CFC1P0CG37 223 aa15.31■□□□□ 0.04
LIMS2-214ENST00000476932 DEFB114Q30KQ6 69 aa15.31■□□□□ 0.04
LIMS2-214ENST00000476932 ETDBQ3ZM63 59 aa15.31■□□□□ 0.04
LIMS2-214ENST00000476932 PTH2Q96A98 100 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms