RNA–Protein interactions for RNA: ENST00000476842.1

SMIM4-202, Transcript of small integral membrane protein 4, humanhuman

TSL 4 BASIC

Gene SMIM4, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-202ENST00000476842 NAT8BQ9UHF3 227 aa12.13□□□□□ -0.47
SMIM4-202ENST00000476842 TRAV9-2A0A087WT02 112 aa12.12□□□□□ -0.47
SMIM4-202ENST00000476842 K7EP13 123 aa12.12□□□□□ -0.47
SMIM4-202ENST00000476842 RTL8CO15255 209 aa12.12□□□□□ -0.47
SMIM4-202ENST00000476842 DNAH10OSP0CZ25 163 aa12.12□□□□□ -0.47
SMIM4-202ENST00000476842 DNAJC30Q96LL9 226 aa12.12□□□□□ -0.47
SMIM4-202ENST00000476842 IGHV3-38A0A0C4DH36 116 aa12.11□□□□□ -0.47
SMIM4-202ENST00000476842 TMEM218A2RU14 115 aa12.11□□□□□ -0.47
SMIM4-202ENST00000476842 LINC00862A6NCI5 91 aa12.11□□□□□ -0.47
SMIM4-202ENST00000476842 BTF3P20290 206 aaKnown RBP12.11□□□□□ -0.47
SMIM4-202ENST00000476842 RASL11AQ6T310 242 aa12.11□□□□□ -0.47
SMIM4-202ENST00000476842 LINC00336Q6ZUF6 198 aa12.11□□□□□ -0.47
SMIM4-202ENST00000476842 C6orf223Q8N319 242 aa12.11□□□□□ -0.47
SMIM4-202ENST00000476842 PPP1R2P9O14990 202 aa12.1□□□□□ -0.47
SMIM4-202ENST00000476842 RIGQ13278 110 aa12.1□□□□□ -0.47
SMIM4-202ENST00000476842 COMMD7Q86VX2 200 aa12.1□□□□□ -0.47
SMIM4-202ENST00000476842 TMEM191AQ9H0A3 160 aa12.1□□□□□ -0.47
SMIM4-202ENST00000476842 NIT2Q9NQR4 276 aa12.1□□□□□ -0.47
SMIM4-202ENST00000476842 TNFRSF18Q9Y5U5 241 aa12.1□□□□□ -0.47
SMIM4-202ENST00000476842 FRAS1Q86XX4 4008 aa12.09□□□□□ -0.47
SMIM4-202ENST00000476842 LINC01556Q5JQF7 62 aa12.09□□□□□ -0.47
SMIM4-202ENST00000476842 DAZ4Q86SG3 579 aaKnown RBP12.09□□□□□ -0.47
SMIM4-202ENST00000476842 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.09□□□□□ -0.47
SMIM4-202ENST00000476842 GATD1Q8NB37 220 aa12.09□□□□□ -0.47
SMIM4-202ENST00000476842 FRZBQ92765 325 aa12.09□□□□□ -0.47
SMIM4-202ENST00000476842 DAZ3Q9NR90 486 aaKnown RBP12.09□□□□□ -0.47
SMIM4-202ENST00000476842 FAT2Q9NYQ8 4349 aa12.08□□□□□ -0.48
SMIM4-202ENST00000476842 ANAPC16Q96DE5 110 aa12.08□□□□□ -0.48
SMIM4-202ENST00000476842 F8W036 122 aa12.07□□□□□ -0.48
SMIM4-202ENST00000476842 MT-ND4LP03901 98 aa12.07□□□□□ -0.48
SMIM4-202ENST00000476842 SEC11CQ9BY50 192 aa12.07□□□□□ -0.48
SMIM4-202ENST00000476842 TRBV6-8A0A0A6YYG3 113 aa12.06□□□□□ -0.48
SMIM4-202ENST00000476842 TRAV26-2A0A0B4J265 109 aa12.06□□□□□ -0.48
SMIM4-202ENST00000476842 ADCYAP1P18509 176 aa12.06□□□□□ -0.48
SMIM4-202ENST00000476842 TMEM97Q5BJF2 176 aa12.06□□□□□ -0.48
SMIM4-202ENST00000476842 C10orf126Q8N4M7 172 aa12.06□□□□□ -0.48
SMIM4-202ENST00000476842 A0A1B0GW15 77 aa12.05□□□□□ -0.48
SMIM4-202ENST00000476842 RAB4AP20338 218 aa12.05□□□□□ -0.48
SMIM4-202ENST00000476842 RNF185Q96GF1 192 aa12.05□□□□□ -0.48
SMIM4-202ENST00000476842 PRSS29PA6NIE9 313 aa12.04□□□□□ -0.48
SMIM4-202ENST00000476842 IGHV3-30P01768 117 aa12.03□□□□□ -0.48
SMIM4-202ENST00000476842 IGHV3-33P01772 117 aa12.03□□□□□ -0.48
SMIM4-202ENST00000476842 IGHV3-30-3P0DP02 117 aa12.03□□□□□ -0.48
SMIM4-202ENST00000476842 IGHV3-30-5P0DP03 117 aa12.03□□□□□ -0.48
SMIM4-202ENST00000476842 NTM-AS1Q6ZSK4 140 aa12.03□□□□□ -0.48
SMIM4-202ENST00000476842 NIT1Q86X76 327 aa12.03□□□□□ -0.48
SMIM4-202ENST00000476842 EPPK1P58107 5090 aaKnown RBP12.03□□□□□ -0.48
SMIM4-202ENST00000476842 IBA57-AS1B1ANH7 110 aa12.02□□□□□ -0.49
SMIM4-202ENST00000476842 CAMPP49913 170 aa12.02□□□□□ -0.49
SMIM4-202ENST00000476842 C10orf91Q5T1B1 145 aa12.02□□□□□ -0.49
SMIM4-202ENST00000476842 NFE4Q86UQ8 179 aa12.02□□□□□ -0.49
SMIM4-202ENST00000476842 AMN1Q8IY45 258 aa12.02□□□□□ -0.49
SMIM4-202ENST00000476842 RPL39LQ96EH5 51 aaKnown RBP12.02□□□□□ -0.49
SMIM4-202ENST00000476842 A0A1B0GXF2 115 aa12.01□□□□□ -0.49
SMIM4-202ENST00000476842 S100A8P05109 93 aa12.01□□□□□ -0.49
SMIM4-202ENST00000476842 KCNIP4Q6PIL6 250 aa12.01□□□□□ -0.49
SMIM4-202ENST00000476842 MRAP2Q96G30 205 aa12.01□□□□□ -0.49
SMIM4-202ENST00000476842 CHCHD7Q9BUK0 85 aa12.01□□□□□ -0.49
SMIM4-202ENST00000476842 TRBV6-5A0A0K0K1A5 114 aa12□□□□□ -0.49
SMIM4-202ENST00000476842 HBBP68871 147 aa12□□□□□ -0.49
SMIM4-202ENST00000476842 FAM104BQ5XKR9 115 aa12□□□□□ -0.49
SMIM4-202ENST00000476842 MRPL54Q6P161 138 aaKnown RBP12□□□□□ -0.49
SMIM4-202ENST00000476842 Q6ZRN7 208 aaPredicted RBP12□□□□□ -0.49
SMIM4-202ENST00000476842 ATP5L2Q7Z4Y8 100 aa12□□□□□ -0.49
SMIM4-202ENST00000476842 Q8N3U1 123 aa12□□□□□ -0.49
SMIM4-202ENST00000476842 URGCP-MRPS24S4R325 110 aa12□□□□□ -0.49
SMIM4-202ENST00000476842 TRBV25-1A0A075B6N4 114 aa11.99□□□□□ -0.49
SMIM4-202ENST00000476842 GAS8-AS1O95177 125 aa11.99□□□□□ -0.49
SMIM4-202ENST00000476842 TNP2Q05952 138 aa11.99□□□□□ -0.49
SMIM4-202ENST00000476842 IQCJQ1A5X6 159 aa11.99□□□□□ -0.49
SMIM4-202ENST00000476842 CTDSP1Q9GZU7 261 aa11.99□□□□□ -0.49
SMIM4-202ENST00000476842 A0A087WX48 190 aa11.98□□□□□ -0.49
SMIM4-202ENST00000476842 IGHV1-24A0A0C4DH33 117 aa11.98□□□□□ -0.49
SMIM4-202ENST00000476842 A0A1B0GVY2 172 aa11.98□□□□□ -0.49
SMIM4-202ENST00000476842 TMEM262E9PQX1 116 aa11.98□□□□□ -0.49
SMIM4-202ENST00000476842 PKIAP61925 76 aa11.98□□□□□ -0.49
SMIM4-202ENST00000476842 LAGE3Q14657 143 aa11.98□□□□□ -0.49
SMIM4-202ENST00000476842 IMMP2LQ96T52 175 aa11.98□□□□□ -0.49
SMIM4-202ENST00000476842 CHCHD5Q9BSY4 110 aa11.98□□□□□ -0.49
SMIM4-202ENST00000476842 CARHSP1Q9Y2V2 147 aaKnown RBP11.98□□□□□ -0.49
SMIM4-202ENST00000476842 SDHAF1A6NFY7 115 aa11.97□□□□□ -0.49
SMIM4-202ENST00000476842 COTL1Q14019 142 aa11.97□□□□□ -0.49
SMIM4-202ENST00000476842 MRPL51Q4U2R6 128 aaKnown RBP11.97□□□□□ -0.49
SMIM4-202ENST00000476842 ST20Q9HBF5 79 aa11.97□□□□□ -0.49
SMIM4-202ENST00000476842 PPP1R17O96001 155 aa11.96□□□□□ -0.49
SMIM4-202ENST00000476842 ELOBQ15370 118 aa11.96□□□□□ -0.49
SMIM4-202ENST00000476842 BTF3L4Q96K17 158 aa11.96□□□□□ -0.49
SMIM4-202ENST00000476842 HECTD4Q9Y4D8 3996 aa11.96□□□□□ -0.5
SMIM4-202ENST00000476842 PKD1P98161 4303 aa11.95□□□□□ -0.5
SMIM4-202ENST00000476842 SMKR1H3BMG3 65 aa11.95□□□□□ -0.5
SMIM4-202ENST00000476842 NCR2O95944 276 aa11.95□□□□□ -0.5
SMIM4-202ENST00000476842 RPS10P46783 165 aaKnown RBP11.95□□□□□ -0.5
SMIM4-202ENST00000476842 POLR2KP53803 58 aaKnown RBP11.95□□□□□ -0.5
SMIM4-202ENST00000476842 DNAH11Q96DT5 4516 aa11.95□□□□□ -0.5
SMIM4-202ENST00000476842 TRAV8-3A0A0A6YYJ7 113 aa11.94□□□□□ -0.5
SMIM4-202ENST00000476842 I3L3M4 83 aa11.94□□□□□ -0.5
SMIM4-202ENST00000476842 PMCHP20382 165 aa11.94□□□□□ -0.5
SMIM4-202ENST00000476842 ATRAIDQ6UW56 229 aa11.94□□□□□ -0.5
SMIM4-202ENST00000476842 NRACQ8N912 160 aa11.94□□□□□ -0.5
SMIM4-202ENST00000476842 DEFB104AQ8WTQ1 72 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms