RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 TMSB15BA0A087X1C1 80 aa10.31□□□□□ -0.76
APOBEC3F-203ENST00000476513 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.31□□□□□ -0.76
APOBEC3F-203ENST00000476513 GTSF1Q8WW33 167 aa10.31□□□□□ -0.76
APOBEC3F-203ENST00000476513 MED28Q9H204 178 aa10.31□□□□□ -0.76
APOBEC3F-203ENST00000476513 A0A1W2PRE2 83 aa10.3□□□□□ -0.76
APOBEC3F-203ENST00000476513 CXorf1O96002 111 aa10.3□□□□□ -0.76
APOBEC3F-203ENST00000476513 IFNA7P01567 189 aa10.3□□□□□ -0.76
APOBEC3F-203ENST00000476513 REG3AQ06141 175 aa10.3□□□□□ -0.76
APOBEC3F-203ENST00000476513 ZNF56Q15929 161 aa10.3□□□□□ -0.76
APOBEC3F-203ENST00000476513 FAM162BQ5T6X4 162 aa10.3□□□□□ -0.76
APOBEC3F-203ENST00000476513 PEX7O00628 323 aa10.29□□□□□ -0.76
APOBEC3F-203ENST00000476513 LINC01559Q495D7 138 aa10.29□□□□□ -0.76
APOBEC3F-203ENST00000476513 TMEM97Q5BJF2 176 aa10.29□□□□□ -0.76
APOBEC3F-203ENST00000476513 COX8CQ7Z4L0 72 aa10.29□□□□□ -0.76
APOBEC3F-203ENST00000476513 VAX2Q9UIW0 290 aa10.29□□□□□ -0.76
APOBEC3F-203ENST00000476513 REG3GQ6UW15 175 aa10.28□□□□□ -0.76
APOBEC3F-203ENST00000476513 DERL1Q9BUN8 251 aa10.28□□□□□ -0.76
APOBEC3F-203ENST00000476513 TRBV25-1A0A075B6N4 114 aa10.27□□□□□ -0.77
APOBEC3F-203ENST00000476513 TRBV6-1A0A0K0K1D8 114 aa10.27□□□□□ -0.77
APOBEC3F-203ENST00000476513 NKX2-5P52952 324 aaPredicted RBP10.27□□□□□ -0.77
APOBEC3F-203ENST00000476513 COX6A2Q02221 97 aa10.27□□□□□ -0.77
APOBEC3F-203ENST00000476513 ZNF674Q2M3X9 581 aa10.27□□□□□ -0.77
APOBEC3F-203ENST00000476513 MAJINQ3KP22 176 aa10.27□□□□□ -0.77
APOBEC3F-203ENST00000476513 SPINK6Q6UWN8 80 aa10.27□□□□□ -0.77
APOBEC3F-203ENST00000476513 ZFP30Q9Y2G7 519 aa10.27□□□□□ -0.77
APOBEC3F-203ENST00000476513 TRAV8-4A0A0B4J246 113 aa10.26□□□□□ -0.77
APOBEC3F-203ENST00000476513 MUC21A0A0G2JKD1 596 aa10.26□□□□□ -0.77
APOBEC3F-203ENST00000476513 P01737 135 aa10.26□□□□□ -0.77
APOBEC3F-203ENST00000476513 MBP02144 154 aa10.26□□□□□ -0.77
APOBEC3F-203ENST00000476513 ATP6V0CP27449 155 aa10.26□□□□□ -0.77
APOBEC3F-203ENST00000476513 RAB5CP51148 216 aa10.26□□□□□ -0.77
APOBEC3F-203ENST00000476513 IFITM2Q01629 132 aa10.26□□□□□ -0.77
APOBEC3F-203ENST00000476513 C20orf203Q8NBC4 194 aa10.26□□□□□ -0.77
APOBEC3F-203ENST00000476513 OR10AG1Q8NH19 301 aa10.26□□□□□ -0.77
APOBEC3F-203ENST00000476513 PSMG3Q9BT73 122 aaPredicted RBP10.26□□□□□ -0.77
APOBEC3F-203ENST00000476513 ACTR3CQ9C0K3 210 aaPredicted RBP10.26□□□□□ -0.77
APOBEC3F-203ENST00000476513 LPAP08519 4548 aa10.26□□□□□ -0.77
APOBEC3F-203ENST00000476513 UBE2G2P60604 165 aa10.25□□□□□ -0.77
APOBEC3F-203ENST00000476513 IQCJQ1A5X6 159 aa10.25□□□□□ -0.77
APOBEC3F-203ENST00000476513 PRSS3P2Q8NHM4 247 aa10.25□□□□□ -0.77
APOBEC3F-203ENST00000476513 LYPD6BQ8NI32 183 aa10.25□□□□□ -0.77
APOBEC3F-203ENST00000476513 HIST1H2BAQ96A08 127 aa10.25□□□□□ -0.77
APOBEC3F-203ENST00000476513 IGKV2-24A0A0C4DH68 120 aa10.24□□□□□ -0.77
APOBEC3F-203ENST00000476513 F5H697 171 aa10.24□□□□□ -0.77
APOBEC3F-203ENST00000476513 SSNA1O43805 119 aa10.24□□□□□ -0.77
APOBEC3F-203ENST00000476513 NDUFS6O75380 124 aaKnown RBP10.24□□□□□ -0.77
APOBEC3F-203ENST00000476513 SERF2P84101 59 aa10.24□□□□□ -0.77
APOBEC3F-203ENST00000476513 NDUFA5Q16718 116 aa10.24□□□□□ -0.77
APOBEC3F-203ENST00000476513 STPG4Q8N801 248 aa10.24□□□□□ -0.77
APOBEC3F-203ENST00000476513 KRTAP9-2Q9BYQ4 174 aa10.24□□□□□ -0.77
APOBEC3F-203ENST00000476513 GFRA4Q9GZZ7 299 aa10.24□□□□□ -0.77
APOBEC3F-203ENST00000476513 IGLV4-60A0A075B6I1 120 aa10.23□□□□□ -0.77
APOBEC3F-203ENST00000476513 IGHV1-24A0A0C4DH33 117 aa10.23□□□□□ -0.77
APOBEC3F-203ENST00000476513 GZMBP10144 247 aa10.23□□□□□ -0.77
APOBEC3F-203ENST00000476513 SRSF9Q13242 221 aaKnown RBP eCLIP10.23□□□□□ -0.77
APOBEC3F-203ENST00000476513 C15orf56Q8N910 161 aa10.23□□□□□ -0.77
APOBEC3F-203ENST00000476513 FAM210AQ96ND0 272 aa10.23□□□□□ -0.77
APOBEC3F-203ENST00000476513 ZNF471Q9BX82 626 aaPredicted RBP10.23□□□□□ -0.77
APOBEC3F-203ENST00000476513 TNFSF18Q9UNG2 199 aa10.23□□□□□ -0.77
APOBEC3F-203ENST00000476513 FAM74A7A6NL05 159 aa10.22□□□□□ -0.77
APOBEC3F-203ENST00000476513 ATP6V1G1O75348 118 aa10.22□□□□□ -0.77
APOBEC3F-203ENST00000476513 RPS10P46783 165 aaKnown RBP10.22□□□□□ -0.77
APOBEC3F-203ENST00000476513 FMC1Q96HJ9 113 aa10.22□□□□□ -0.77
APOBEC3F-203ENST00000476513 MUC21A0A140T8X8 626 aa10.21□□□□□ -0.77
APOBEC3F-203ENST00000476513 GIPP09681 153 aaPredicted RBP10.21□□□□□ -0.77
APOBEC3F-203ENST00000476513 UBE2G1P62253 170 aa10.21□□□□□ -0.77
APOBEC3F-203ENST00000476513 ZNF726P1Q15940 193 aa10.21□□□□□ -0.77
APOBEC3F-203ENST00000476513 A0A1B0GUV1 79 aa10.2□□□□□ -0.78
APOBEC3F-203ENST00000476513 LTAP01374 205 aa10.2□□□□□ -0.78
APOBEC3F-203ENST00000476513 C9orf62Q8N4C0 152 aa10.2□□□□□ -0.78
APOBEC3F-203ENST00000476513 NKX6-2Q9C056 277 aaPredicted RBP10.2□□□□□ -0.78
APOBEC3F-203ENST00000476513 HIGD2BQ4VC39 106 aa10.19□□□□□ -0.78
APOBEC3F-203ENST00000476513 SPANXN1Q5VSR9 72 aa10.19□□□□□ -0.78
APOBEC3F-203ENST00000476513 CFAP161Q6P656 301 aa10.19□□□□□ -0.78
APOBEC3F-203ENST00000476513 AQP10Q96PS8 301 aa10.19□□□□□ -0.78
APOBEC3F-203ENST00000476513 A0A096LNI7 61 aa10.18□□□□□ -0.78
APOBEC3F-203ENST00000476513 SMLR1H3BR10 107 aa10.18□□□□□ -0.78
APOBEC3F-203ENST00000476513 SNAI2O43623 268 aa10.18□□□□□ -0.78
APOBEC3F-203ENST00000476513 CXCL1P09341 107 aa10.18□□□□□ -0.78
APOBEC3F-203ENST00000476513 SSTP61278 116 aa10.18□□□□□ -0.78
APOBEC3F-203ENST00000476513 Q5BKY6 102 aa10.18□□□□□ -0.78
APOBEC3F-203ENST00000476513 INO80EQ8NBZ0 244 aaPredicted RBP10.18□□□□□ -0.78
APOBEC3F-203ENST00000476513 TMEM243Q9BU79 118 aa10.18□□□□□ -0.78
APOBEC3F-203ENST00000476513 SSBP4Q9BWG4 385 aaPredicted RBP10.18□□□□□ -0.78
APOBEC3F-203ENST00000476513 CTXND1A0A1B0GTU2 59 aa10.17□□□□□ -0.78
APOBEC3F-203ENST00000476513 GAGE12HA6NDE8 117 aa10.17□□□□□ -0.78
APOBEC3F-203ENST00000476513 G3V3Q6 166 aa10.16□□□□□ -0.78
APOBEC3F-203ENST00000476513 M0QY20 66 aa10.16□□□□□ -0.78
APOBEC3F-203ENST00000476513 OR5AL1P0C617 328 aa10.16□□□□□ -0.78
APOBEC3F-203ENST00000476513 SULT1A2P50226 295 aa10.16□□□□□ -0.78
APOBEC3F-203ENST00000476513 Q6ZRP5 223 aa10.16□□□□□ -0.78
APOBEC3F-203ENST00000476513 SMIM17P0DL12 118 aa10.15□□□□□ -0.78
APOBEC3F-203ENST00000476513 MUC2Q02817 5179 aa10.15□□□□□ -0.78
APOBEC3F-203ENST00000476513 HMSDA8MTL9 139 aa10.14□□□□□ -0.79
APOBEC3F-203ENST00000476513 H7C1H1 209 aa10.14□□□□□ -0.79
APOBEC3F-203ENST00000476513 AP1S3Q96PC3 154 aa10.14□□□□□ -0.79
APOBEC3F-203ENST00000476513 LINC00474Q9P2X8 69 aa10.14□□□□□ -0.79
APOBEC3F-203ENST00000476513 GVQW2A0A096LPI5 108 aaPredicted RBP10.13□□□□□ -0.79
APOBEC3F-203ENST00000476513 S100A1P23297 94 aa10.13□□□□□ -0.79
APOBEC3F-203ENST00000476513 AKR1C3P42330 323 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms