RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 IGF1P05019 195 aa6.32□□□□□ -1.4
VAPB-205ENST00000476395 C19orf54Q5BKX5 351 aa6.32□□□□□ -1.4
VAPB-205ENST00000476395 GPHB5Q86YW7 130 aa6.32□□□□□ -1.4
VAPB-205ENST00000476395 KLK5Q9Y337 293 aaPredicted RBP6.32□□□□□ -1.4
VAPB-205ENST00000476395 TMEM219Q86XT9 240 aa6.32□□□□□ -1.4
VAPB-205ENST00000476395 AGPAT4-IT1Q9H0P7 198 aa6.32□□□□□ -1.4
VAPB-205ENST00000476395 PMVKQ15126 192 aa6.31□□□□□ -1.4
VAPB-205ENST00000476395 Q6ZSV7 163 aa6.31□□□□□ -1.4
VAPB-205ENST00000476395 ZNF580Q9UK33 172 aa6.31□□□□□ -1.4
VAPB-205ENST00000476395 DUSP14O95147 198 aaKnown RBP6.31□□□□□ -1.4
VAPB-205ENST00000476395 IGHV3-30P01768 117 aa6.31□□□□□ -1.4
VAPB-205ENST00000476395 CRYGDP07320 174 aa6.31□□□□□ -1.4
VAPB-205ENST00000476395 IGHV3-30-5P0DP03 117 aa6.31□□□□□ -1.4
VAPB-205ENST00000476395 DEFB1P60022 68 aa6.31□□□□□ -1.4
VAPB-205ENST00000476395 HIST2H2BCQ6DN03 193 aa6.31□□□□□ -1.4
VAPB-205ENST00000476395 HIST2H2BDQ6DRA6 164 aa6.31□□□□□ -1.4
VAPB-205ENST00000476395 LINC00336Q6ZUF6 198 aa6.31□□□□□ -1.4
VAPB-205ENST00000476395 TMEM86BQ8N661 226 aa6.31□□□□□ -1.4
VAPB-205ENST00000476395 U3KQE9 123 aa6.31□□□□□ -1.4
VAPB-205ENST00000476395 CEMP1Q6PRD7 247 aaPredicted RBP6.31□□□□□ -1.4
VAPB-205ENST00000476395 CCL21O00585 134 aa6.3□□□□□ -1.4
VAPB-205ENST00000476395 C9orf153Q5TBE3 101 aa6.3□□□□□ -1.4
VAPB-205ENST00000476395 G3V318 75 aa6.3□□□□□ -1.4
VAPB-205ENST00000476395 M0R381 172 aa6.3□□□□□ -1.4
VAPB-205ENST00000476395 ATP6V0E1O15342 81 aa6.3□□□□□ -1.4
VAPB-205ENST00000476395 C15orf32Q32M92 178 aa6.3□□□□□ -1.4
VAPB-205ENST00000476395 C2orf66Q6UXQ4 117 aa6.3□□□□□ -1.4
VAPB-205ENST00000476395 SMIM2Q9BVW6 85 aa6.3□□□□□ -1.4
VAPB-205ENST00000476395 ZNF469Q96JG9 3925 aaPredicted RBP6.3□□□□□ -1.4
VAPB-205ENST00000476395 IGHV4-4A0A075B6R2 117 aa6.29□□□□□ -1.4
VAPB-205ENST00000476395 RBAKDNA6NC62 111 aa6.29□□□□□ -1.4
VAPB-205ENST00000476395 TMEM262E9PQX1 116 aa6.29□□□□□ -1.4
VAPB-205ENST00000476395 TSHBP01222 138 aa6.29□□□□□ -1.4
VAPB-205ENST00000476395 RPL39P62891 51 aaKnown RBP6.29□□□□□ -1.4
VAPB-205ENST00000476395 SPANXN1Q5VSR9 72 aa6.29□□□□□ -1.4
VAPB-205ENST00000476395 SPANXCQ9NY87 97 aa6.29□□□□□ -1.4
VAPB-205ENST00000476395 OOSP1A8MZH6 123 aa6.29□□□□□ -1.4
VAPB-205ENST00000476395 RPS28P62857 69 aaKnown RBP6.29□□□□□ -1.4
VAPB-205ENST00000476395 MUC4Q99102 2169 aa6.29□□□□□ -1.4
VAPB-205ENST00000476395 NBPF19A0A087WUL8 3843 aa6.29□□□□□ -1.4
VAPB-205ENST00000476395 IGLV4-69A0A075B6H9 119 aa6.29□□□□□ -1.4
VAPB-205ENST00000476395 ADARB2-AS1A8MUL3 147 aa6.29□□□□□ -1.4
VAPB-205ENST00000476395 ZNF22P17026 224 aaPredicted RBP6.29□□□□□ -1.4
VAPB-205ENST00000476395 ITLN2Q8WWU7 325 aaPredicted RBP6.29□□□□□ -1.4
VAPB-205ENST00000476395 LINC01587Q99440 93 aa6.29□□□□□ -1.4
VAPB-205ENST00000476395 PRO1854Q9UHT4 67 aa6.29□□□□□ -1.4
VAPB-205ENST00000476395 A0A0U1RQV1 116 aa6.28□□□□□ -1.4
VAPB-205ENST00000476395 LINC01619G3V211 115 aa6.28□□□□□ -1.4
VAPB-205ENST00000476395 ZNF56Q15929 161 aa6.28□□□□□ -1.4
VAPB-205ENST00000476395 OPRPNQ99935 248 aaPredicted RBP6.28□□□□□ -1.4
VAPB-205ENST00000476395 TRAV2A0A0B4J234 112 aa6.28□□□□□ -1.4
VAPB-205ENST00000476395 HERVK_113P63121 156 aa6.28□□□□□ -1.4
VAPB-205ENST00000476395 PSMG4Q5JS54 123 aa6.28□□□□□ -1.4
VAPB-205ENST00000476395 TMEM170BQ5T4T1 132 aa6.28□□□□□ -1.4
VAPB-205ENST00000476395 TOMM6Q96B49 74 aa6.28□□□□□ -1.4
VAPB-205ENST00000476395 POLQO75417 2590 aa6.28□□□□□ -1.4
VAPB-205ENST00000476395 TRAV12-1A0A0B4J245 112 aa6.28□□□□□ -1.4
VAPB-205ENST00000476395 TRAV8-4A0A0B4J246 113 aa6.28□□□□□ -1.4
VAPB-205ENST00000476395 FAM236AA0A1B0GUQ0 79 aa6.28□□□□□ -1.4
VAPB-205ENST00000476395 FAM236BA0A1B0GV22 79 aa6.28□□□□□ -1.4
VAPB-205ENST00000476395 SOCS3O14543 225 aa6.28□□□□□ -1.4
VAPB-205ENST00000476395 Q1RN00 199 aa6.28□□□□□ -1.4
VAPB-205ENST00000476395 LINC01620Q4KN68 170 aa6.28□□□□□ -1.4
VAPB-205ENST00000476395 IGHV3-33P01772 117 aa6.27□□□□□ -1.41
VAPB-205ENST00000476395 MGPP08493 103 aa6.27□□□□□ -1.41
VAPB-205ENST00000476395 NPC2P61916 151 aa6.27□□□□□ -1.41
VAPB-205ENST00000476395 FAM19A4Q96LR4 140 aa6.27□□□□□ -1.41
VAPB-205ENST00000476395 JPT2Q9H910 190 aa6.27□□□□□ -1.41
VAPB-205ENST00000476395 C9orf47Q6ZRZ4 202 aa6.27□□□□□ -1.41
VAPB-205ENST00000476395 C11orf44Q8N8P7 122 aa6.27□□□□□ -1.41
VAPB-205ENST00000476395 MRPL53Q96EL3 112 aaKnown RBP6.27□□□□□ -1.41
VAPB-205ENST00000476395 AMELXQ99217 191 aa6.27□□□□□ -1.41
VAPB-205ENST00000476395 SUMO2P61956 95 aaKnown RBP6.27□□□□□ -1.41
VAPB-205ENST00000476395 MINOS1Q5TGZ0 78 aa6.27□□□□□ -1.41
VAPB-205ENST00000476395 MINOS1-NBL1R4GNA1 71 aa6.27□□□□□ -1.41
VAPB-205ENST00000476395 TRBV12-3P01733 135 aa6.26□□□□□ -1.41
VAPB-205ENST00000476395 PRB1P04280 392 aa6.26□□□□□ -1.41
VAPB-205ENST00000476395 NDUFA7O95182 113 aa6.26□□□□□ -1.41
VAPB-205ENST00000476395 ZFAND2AQ8N6M9 145 aa6.26□□□□□ -1.41
VAPB-205ENST00000476395 OR10J6PQ8NGY7 276 aa6.26□□□□□ -1.41
VAPB-205ENST00000476395 CLEC2BQ92478 149 aa6.26□□□□□ -1.41
VAPB-205ENST00000476395 TRIAP1O43715 76 aa6.26□□□□□ -1.41
VAPB-205ENST00000476395 ASIPP42127 132 aa6.26□□□□□ -1.41
VAPB-205ENST00000476395 LMO4P61968 165 aa6.26□□□□□ -1.41
VAPB-205ENST00000476395 CLEC19AQ6UXS0 136 aa6.26□□□□□ -1.41
VAPB-205ENST00000476395 UNQ9165/PRO28630Q6UXU0 137 aa6.26□□□□□ -1.41
VAPB-205ENST00000476395 MUSTN1Q8IVN3 82 aa6.26□□□□□ -1.41
VAPB-205ENST00000476395 C5orf56Q8N8D9 126 aa6.26□□□□□ -1.41
VAPB-205ENST00000476395 MDFICQ9P1T7 246 aa6.26□□□□□ -1.41
VAPB-205ENST00000476395 SAA4P35542 130 aa6.25□□□□□ -1.41
VAPB-205ENST00000476395 APRG1Q8IVJ8 170 aa6.25□□□□□ -1.41
VAPB-205ENST00000476395 SLC25A29Q8N8R3 303 aa6.25□□□□□ -1.41
VAPB-205ENST00000476395 TMEM263Q8WUH6 116 aaKnown RBP6.25□□□□□ -1.41
VAPB-205ENST00000476395 EEF1AKMT3Q96AZ1 226 aa6.25□□□□□ -1.41
VAPB-205ENST00000476395 TP53TG1Q9Y2A0 90 aa6.25□□□□□ -1.41
VAPB-205ENST00000476395 ECSCRQ19T08 205 aa6.25□□□□□ -1.41
VAPB-205ENST00000476395 TRGV11A0A075B6L2 103 aa6.24□□□□□ -1.41
VAPB-205ENST00000476395 LGALS9O00182 355 aa6.24□□□□□ -1.41
VAPB-205ENST00000476395 UBE2E1P51965 193 aa6.24□□□□□ -1.41
VAPB-205ENST00000476395 LINC00315P59091 139 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms